RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 PRADC1Q9BSG0 188 aa15.52■□□□□ 0.08
SSBP3-216ENST00000610401 ACACBO00763 2458 aa15.52■□□□□ 0.07
SSBP3-216ENST00000610401 K7ENP7 123 aa15.52■□□□□ 0.07
SSBP3-216ENST00000610401 WNK1Q9H4A3 2382 aa15.52■□□□□ 0.07
SSBP3-216ENST00000610401 DUSP14O95147 198 aaKnown RBP15.51■□□□□ 0.07
SSBP3-216ENST00000610401 CLEC2AQ6UVW9 174 aa15.51■□□□□ 0.07
SSBP3-216ENST00000610401 FOXI2Q6ZQN5 318 aa15.51■□□□□ 0.07
SSBP3-216ENST00000610401 PF4V1P10720 104 aa15.51■□□□□ 0.07
SSBP3-216ENST00000610401 ZNF48Q96MX3 618 aaPredicted RBP15.51■□□□□ 0.07
SSBP3-216ENST00000610401 ZFYVE26Q68DK2 2539 aa15.51■□□□□ 0.07
SSBP3-216ENST00000610401 PRSS29PA6NIE9 313 aa15.5■□□□□ 0.07
SSBP3-216ENST00000610401 LINC01549A6NIU2 74 aa15.5■□□□□ 0.07
SSBP3-216ENST00000610401 PSMB2P49721 201 aa15.5■□□□□ 0.07
SSBP3-216ENST00000610401 LY6DQ14210 128 aa15.5■□□□□ 0.07
SSBP3-216ENST00000610401 F8VRH5 84 aa15.5■□□□□ 0.07
SSBP3-216ENST00000610401 H7C1H1 209 aa15.5■□□□□ 0.07
SSBP3-216ENST00000610401 GAGE13Q4V321 117 aa15.5■□□□□ 0.07
SSBP3-216ENST00000610401 ZFP2Q6ZN57 461 aa15.5■□□□□ 0.07
SSBP3-216ENST00000610401 Q6ZS46 218 aa15.5■□□□□ 0.07
SSBP3-216ENST00000610401 SPAG8Q99932 426 aaPredicted RBP15.5■□□□□ 0.07
SSBP3-216ENST00000610401 SIRPDQ9H106 197 aa15.5■□□□□ 0.07
SSBP3-216ENST00000610401 COX8CQ7Z4L0 72 aa15.49■□□□□ 0.07
SSBP3-216ENST00000610401 OR10J6PQ8NGY7 276 aa15.49■□□□□ 0.07
SSBP3-216ENST00000610401 LINC00477Q96M19 166 aa15.49■□□□□ 0.07
SSBP3-216ENST00000610401 ZNF256Q9Y2P7 627 aaPredicted RBP15.49■□□□□ 0.07
SSBP3-216ENST00000610401 PSMG3-AS1Q96PY0 264 aa15.49■□□□□ 0.07
SSBP3-216ENST00000610401 CENPVL3A0A0U1RRI6 287 aa15.48■□□□□ 0.07
SSBP3-216ENST00000610401 MYMXA0A1B0GTQ4 84 aa15.48■□□□□ 0.07
SSBP3-216ENST00000610401 OPRPNQ99935 248 aaPredicted RBP15.48■□□□□ 0.07
SSBP3-216ENST00000610401 TM2D2Q9BX73 214 aa15.48■□□□□ 0.07
SSBP3-216ENST00000610401 TRAV41A0A0B4J266 112 aa15.48■□□□□ 0.07
SSBP3-216ENST00000610401 E9PLD3 99 aa15.48■□□□□ 0.07
SSBP3-216ENST00000610401 TMEM170BQ5T4T1 132 aa15.48■□□□□ 0.07
SSBP3-216ENST00000610401 HIGD1BQ9P298 99 aa15.48■□□□□ 0.07
SSBP3-216ENST00000610401 ABCA2Q9BZC7 2435 aa15.48■□□□□ 0.07
SSBP3-216ENST00000610401 GAGE12HA6NDE8 117 aa15.47■□□□□ 0.07
SSBP3-216ENST00000610401 ASIPP42127 132 aa15.47■□□□□ 0.07
SSBP3-216ENST00000610401 C20orf78Q9BR46 151 aa15.47■□□□□ 0.07
SSBP3-216ENST00000610401 TRAV12-2A0A075B6T6 113 aa15.47■□□□□ 0.07
SSBP3-216ENST00000610401 TMEM95Q3KNT9 176 aa15.47■□□□□ 0.07
SSBP3-216ENST00000610401 MINOS1Q5TGZ0 78 aa15.47■□□□□ 0.07
SSBP3-216ENST00000610401 SPANXB1Q9NS25 103 aaPredicted RBP15.47■□□□□ 0.07
SSBP3-216ENST00000610401 MINOS1-NBL1R4GNA1 71 aa15.47■□□□□ 0.07
SSBP3-216ENST00000610401 MUC4Q99102 2169 aa15.47■□□□□ 0.07
SSBP3-216ENST00000610401 NPFFO15130 113 aa15.46■□□□□ 0.07
SSBP3-216ENST00000610401 LGALS1P09382 135 aaKnown RBP15.46■□□□□ 0.07
SSBP3-216ENST00000610401 BLCAPP62952 87 aa15.46■□□□□ 0.07
SSBP3-216ENST00000610401 BAALCQ8WXS3 180 aa15.46■□□□□ 0.07
SSBP3-216ENST00000610401 SIGMAR1Q99720 223 aa15.46■□□□□ 0.07
SSBP3-216ENST00000610401 SMPXQ9UHP9 88 aa15.46■□□□□ 0.07
SSBP3-216ENST00000610401 HOXA3O43365 443 aaPredicted RBP15.46■□□□□ 0.07
SSBP3-216ENST00000610401 PLNP26678 52 aa15.46■□□□□ 0.07
SSBP3-216ENST00000610401 C11orf71Q6IPW1 123 aa15.46■□□□□ 0.07
SSBP3-216ENST00000610401 AJUBAQ96IF1 538 aa15.46■□□□□ 0.07
SSBP3-216ENST00000610401 SONP18583 2426 aaKnown RBP15.46■□□□□ 0.07
SSBP3-216ENST00000610401 TRAV12-3A0A0B4J271 114 aa15.46■□□□□ 0.06
SSBP3-216ENST00000610401 UBE2E1P51965 193 aa15.45■□□□□ 0.06
SSBP3-216ENST00000610401 TP53TG1Q9Y2A0 90 aa15.45■□□□□ 0.06
SSBP3-216ENST00000610401 ZFAND2AQ8N6M9 145 aa15.44■□□□□ 0.06
SSBP3-216ENST00000610401 RRN3P1Q2M238 152 aa15.44■□□□□ 0.06
SSBP3-216ENST00000610401 C5orf56Q8N8D9 126 aa15.44■□□□□ 0.06
SSBP3-216ENST00000610401 EBI3Q14213 229 aa15.43■□□□□ 0.06
SSBP3-216ENST00000610401 C9orf47Q6ZRZ4 202 aa15.43■□□□□ 0.06
SSBP3-216ENST00000610401 GPHB5Q86YW7 130 aa15.43■□□□□ 0.06
SSBP3-216ENST00000610401 SPOCK3Q9BQ16 436 aa15.43■□□□□ 0.06
SSBP3-216ENST00000610401 RAB9AP51151 201 aa15.43■□□□□ 0.06
SSBP3-216ENST00000610401 DPH3P1Q9H4G8 78 aa15.43■□□□□ 0.06
SSBP3-216ENST00000610401 RBAKDNA6NC62 111 aa15.42■□□□□ 0.06
SSBP3-216ENST00000610401 CFAP46Q8IYW2 2715 aa15.42■□□□□ 0.06
SSBP3-216ENST00000610401 TRAV21A0A0B4J279 112 aa15.42■□□□□ 0.06
SSBP3-216ENST00000610401 C11orf86A6NJI1 115 aa15.42■□□□□ 0.06
SSBP3-216ENST00000610401 CD7P09564 240 aa15.42■□□□□ 0.06
SSBP3-216ENST00000610401 ABCA12Q86UK0 2595 aa15.42■□□□□ 0.06
SSBP3-216ENST00000610401 TRBV7-1A0A0A6YYK4 115 aa15.41■□□□□ 0.06
SSBP3-216ENST00000610401 RAX2Q96IS3 184 aa15.41■□□□□ 0.06
SSBP3-216ENST00000610401 DUX5Q96PT3 197 aa15.41■□□□□ 0.06
SSBP3-216ENST00000610401 TRBV7-3A0A075B6L6 115 aa15.41■□□□□ 0.06
SSBP3-216ENST00000610401 IGHV3-73A0A0B4J1V6 119 aa15.41■□□□□ 0.06
SSBP3-216ENST00000610401 ORMDL2Q53FV1 153 aa15.41■□□□□ 0.06
SSBP3-216ENST00000610401 IGHV4-38-2P0DP08 117 aa15.4■□□□□ 0.06
SSBP3-216ENST00000610401 MORN3Q6PF18 240 aaPredicted RBP15.4■□□□□ 0.06
SSBP3-216ENST00000610401 NEXN-AS1Q8NBZ9 246 aa15.4■□□□□ 0.06
SSBP3-216ENST00000610401 RHPN1-AS1Q9BWJ2 59 aa15.4■□□□□ 0.06
SSBP3-216ENST00000610401 SCGB1C2P0DMR2 95 aa15.4■□□□□ 0.06
SSBP3-216ENST00000610401 ZNF688P0C7X2 276 aa15.4■□□□□ 0.06
SSBP3-216ENST00000610401 FBN2P35556 2912 aa15.4■□□□□ 0.06
SSBP3-216ENST00000610401 ADARB2-AS1A8MUL3 147 aa15.39■□□□□ 0.05
SSBP3-216ENST00000610401 H3BUX3 64 aa15.39■□□□□ 0.05
SSBP3-216ENST00000610401 KLK9Q9UKQ9 250 aa15.39■□□□□ 0.05
SSBP3-216ENST00000610401 F8W1H4 67 aa15.39■□□□□ 0.05
SSBP3-216ENST00000610401 C10orf99Q6UWK7 81 aa15.39■□□□□ 0.05
SSBP3-216ENST00000610401 TOMM6Q96B49 74 aa15.39■□□□□ 0.05
SSBP3-216ENST00000610401 PRM2P04554 102 aa15.38■□□□□ 0.05
SSBP3-216ENST00000610401 RNASE3P12724 160 aaKnown RBP15.38■□□□□ 0.05
SSBP3-216ENST00000610401 LMO4P61968 165 aa15.38■□□□□ 0.05
SSBP3-216ENST00000610401 HIST2H2BDQ6DRA6 164 aa15.38■□□□□ 0.05
SSBP3-216ENST00000610401 OOSP1A8MZH6 123 aa15.38■□□□□ 0.05
SSBP3-216ENST00000610401 NDUFS8O00217 210 aa15.38■□□□□ 0.05
SSBP3-216ENST00000610401 SRSF2Q01130 221 aaKnown RBP15.38■□□□□ 0.05
SSBP3-216ENST00000610401 SYT8Q8NBV8 401 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms