RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 CRCT1Q9UGL9 99 aa1.93□□□□□ -2.1
SMCHD1-213ENST00000609587 TRPM3Q9HCF6 1732 aaPredicted RBP1.93□□□□□ -2.1
SMCHD1-213ENST00000609587 PRR14LQ5THK1 2151 aa1.93□□□□□ -2.1
SMCHD1-213ENST00000609587 MALRD1Q5VYJ5 2156 aa1.93□□□□□ -2.1
SMCHD1-213ENST00000609587 ABCA8O94911 1581 aa1.93□□□□□ -2.1
SMCHD1-213ENST00000609587 TRPM6Q9BX84 2022 aa1.93□□□□□ -2.1
SMCHD1-213ENST00000609587 DAPK1P53355 1430 aa1.92□□□□□ -2.1
SMCHD1-213ENST00000609587 ABCC2Q92887 1545 aa1.92□□□□□ -2.1
SMCHD1-213ENST00000609587 CACNA1DQ01668 2161 aa1.92□□□□□ -2.1
SMCHD1-213ENST00000609587 TRAV7A0A075B6U4 112 aa1.92□□□□□ -2.1
SMCHD1-213ENST00000609587 A0A087WSZ3 146 aa1.92□□□□□ -2.1
SMCHD1-213ENST00000609587 IGKV2D-26A0A0A0MRZ7 120 aa1.92□□□□□ -2.1
SMCHD1-213ENST00000609587 UBE2L5PA0A1B0GUS4 154 aa1.92□□□□□ -2.1
SMCHD1-213ENST00000609587 J3QRE1 110 aa1.92□□□□□ -2.1
SMCHD1-213ENST00000609587 NUPR1O60356 82 aa1.92□□□□□ -2.1
SMCHD1-213ENST00000609587 CCKP06307 115 aa1.92□□□□□ -2.1
SMCHD1-213ENST00000609587 ZNF705BP0CI00 300 aaPredicted RBP1.92□□□□□ -2.1
SMCHD1-213ENST00000609587 CBLN1P23435 193 aa1.92□□□□□ -2.1
SMCHD1-213ENST00000609587 CKS2P33552 79 aa1.92□□□□□ -2.1
SMCHD1-213ENST00000609587 UBE2L3P68036 154 aaKnown RBP1.92□□□□□ -2.1
SMCHD1-213ENST00000609587 ZNF117Q03924 483 aa1.92□□□□□ -2.1
SMCHD1-213ENST00000609587 INSL4Q14641 139 aa1.92□□□□□ -2.1
SMCHD1-213ENST00000609587 Q8NAQ8 132 aa1.92□□□□□ -2.1
SMCHD1-213ENST00000609587 LINC00301Q8NCQ3 95 aa1.92□□□□□ -2.1
SMCHD1-213ENST00000609587 Q96M85 177 aa1.92□□□□□ -2.1
SMCHD1-213ENST00000609587 NHP2Q9NX24 153 aaKnown RBP1.92□□□□□ -2.1
SMCHD1-213ENST00000609587 TPRKBQ9Y3C4 175 aa1.92□□□□□ -2.1
SMCHD1-213ENST00000609587 PLIN4Q96Q06 1357 aa1.92□□□□□ -2.1
SMCHD1-213ENST00000609587 EPRSP07814 1512 aaKnown RBP1.91□□□□□ -2.1
SMCHD1-213ENST00000609587 PTPRFP10586 1907 aa1.91□□□□□ -2.1
SMCHD1-213ENST00000609587 MYH8P13535 1937 aa1.91□□□□□ -2.1
SMCHD1-213ENST00000609587 SNRNP200O75643 2136 aaKnown RBP1.91□□□□□ -2.1
SMCHD1-213ENST00000609587 MUC4Q99102 2169 aa1.91□□□□□ -2.1
SMCHD1-213ENST00000609587 LTN1O94822 1766 aa1.91□□□□□ -2.1
SMCHD1-213ENST00000609587 PPRC1Q5VV67 1664 aaKnown RBP1.91□□□□□ -2.1
SMCHD1-213ENST00000609587 CFAP74Q9C0B2 1584 aa1.91□□□□□ -2.1
SMCHD1-213ENST00000609587 PTPRMP28827 1452 aa1.91□□□□□ -2.1
SMCHD1-213ENST00000609587 NLRP1Q9C000 1473 aa1.91□□□□□ -2.1
SMCHD1-213ENST00000609587 A0A1B0GU33 70 aa1.91□□□□□ -2.1
SMCHD1-213ENST00000609587 TMEM235A6NFC5 223 aa1.91□□□□□ -2.1
SMCHD1-213ENST00000609587 H3BPC8 53 aa1.91□□□□□ -2.1
SMCHD1-213ENST00000609587 J3QLW9 94 aa1.91□□□□□ -2.1
SMCHD1-213ENST00000609587 LYRM1O43325 122 aa1.91□□□□□ -2.1
SMCHD1-213ENST00000609587 SNCGO76070 127 aa1.91□□□□□ -2.1
SMCHD1-213ENST00000609587 CYB5AP00167 134 aa1.91□□□□□ -2.1
SMCHD1-213ENST00000609587 IGLC2P0DOY2 106 aa1.91□□□□□ -2.1
SMCHD1-213ENST00000609587 IGLC3P0DOY3 106 aa1.91□□□□□ -2.1
SMCHD1-213ENST00000609587 NNATQ16517 81 aa1.91□□□□□ -2.1
SMCHD1-213ENST00000609587 Q1T7F1 81 aa1.91□□□□□ -2.1
SMCHD1-213ENST00000609587 ESRGQ1W209 222 aa1.91□□□□□ -2.1
SMCHD1-213ENST00000609587 C20orf166-AS1Q96NR2 134 aa1.91□□□□□ -2.1
SMCHD1-213ENST00000609587 AMELYQ99218 206 aa1.91□□□□□ -2.1
SMCHD1-213ENST00000609587 CXCL16Q9H2A7 254 aa1.91□□□□□ -2.1
SMCHD1-213ENST00000609587 PTPRDP23468 1912 aa1.91□□□□□ -2.1
SMCHD1-213ENST00000609587 GREB1Q4ZG55 1949 aa1.91□□□□□ -2.1
SMCHD1-213ENST00000609587 KNDC1Q76NI1 1749 aa1.91□□□□□ -2.1
SMCHD1-213ENST00000609587 PTPN23Q9H3S7 1636 aa1.91□□□□□ -2.1
SMCHD1-213ENST00000609587 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.91□□□□□ -2.1
SMCHD1-213ENST00000609587 DOCK1Q14185 1865 aa1.9□□□□□ -2.1
SMCHD1-213ENST00000609587 LAMB4A4D0S4 1761 aa1.9□□□□□ -2.1
SMCHD1-213ENST00000609587 KIF1AQ12756 1690 aa1.9□□□□□ -2.1
SMCHD1-213ENST00000609587 MLH3Q9UHC1 1453 aa1.9□□□□□ -2.11
SMCHD1-213ENST00000609587 hDV103S1A0JD37 113 aa1.9□□□□□ -2.11
SMCHD1-213ENST00000609587 SDHAF1A6NFY7 115 aa1.9□□□□□ -2.11
SMCHD1-213ENST00000609587 C17orf112F2Z3M2 114 aa1.9□□□□□ -2.11
SMCHD1-213ENST00000609587 GNGT2O14610 69 aa1.9□□□□□ -2.11
SMCHD1-213ENST00000609587 IGKCP01834 107 aa1.9□□□□□ -2.11
SMCHD1-213ENST00000609587 CTSGP08311 255 aa1.9□□□□□ -2.11
SMCHD1-213ENST00000609587 PIRTP0C851 137 aa1.9□□□□□ -2.11
SMCHD1-213ENST00000609587 C1orf134Q5TEV5 83 aa1.9□□□□□ -2.11
SMCHD1-213ENST00000609587 FAM27BQ5VT28 67 aa1.9□□□□□ -2.11
SMCHD1-213ENST00000609587 COMMD6Q7Z4G1 85 aa1.9□□□□□ -2.11
SMCHD1-213ENST00000609587 S100ZQ8WXG8 99 aa1.9□□□□□ -2.11
SMCHD1-213ENST00000609587 LINC01600Q96MT4 127 aa1.9□□□□□ -2.11
SMCHD1-213ENST00000609587 CYSTM1Q9H1C7 97 aa1.9□□□□□ -2.11
SMCHD1-213ENST00000609587 RABAC1Q9UI14 185 aa1.9□□□□□ -2.11
SMCHD1-213ENST00000609587 KIAA1549Q9HCM3 1950 aa1.9□□□□□ -2.11
SMCHD1-213ENST00000609587 NRXN1Q9ULB1 1477 aa1.89□□□□□ -2.11
SMCHD1-213ENST00000609587 TARBP1Q13395 1621 aaKnown RBP1.89□□□□□ -2.11
SMCHD1-213ENST00000609587 KIF14Q15058 1648 aa1.89□□□□□ -2.11
SMCHD1-213ENST00000609587 PREX2Q70Z35 1606 aa1.89□□□□□ -2.11
SMCHD1-213ENST00000609587 MROH1Q8NDA8 1641 aa1.89□□□□□ -2.11
SMCHD1-213ENST00000609587 IGHV1-24A0A0C4DH33 117 aa1.89□□□□□ -2.11
SMCHD1-213ENST00000609587 A0A1W2PNM2 257 aa1.89□□□□□ -2.11
SMCHD1-213ENST00000609587 hADV29S1A0JD25 119 aa1.89□□□□□ -2.11
SMCHD1-213ENST00000609587 H3BRM9 83 aa1.89□□□□□ -2.11
SMCHD1-213ENST00000609587 H7C2G1 150 aa1.89□□□□□ -2.11
SMCHD1-213ENST00000609587 CFDP00746 253 aaPredicted RBP1.89□□□□□ -2.11
SMCHD1-213ENST00000609587 IL5P05113 134 aa1.89□□□□□ -2.11
SMCHD1-213ENST00000609587 POLR2JP52435 117 aaKnown RBP1.89□□□□□ -2.11
SMCHD1-213ENST00000609587 DEFA5Q01523 94 aa1.89□□□□□ -2.11
SMCHD1-213ENST00000609587 RHOHQ15669 191 aa1.89□□□□□ -2.11
SMCHD1-213ENST00000609587 KRTAP6-3Q3LI67 103 aa1.89□□□□□ -2.11
SMCHD1-213ENST00000609587 KRTAP26-1Q6PEX3 210 aa1.89□□□□□ -2.11
SMCHD1-213ENST00000609587 SLC25A26Q70HW3 274 aa1.89□□□□□ -2.11
SMCHD1-213ENST00000609587 ZNF431Q8TF32 576 aaPredicted RBP1.89□□□□□ -2.11
SMCHD1-213ENST00000609587 SPTSSAQ969W0 71 aa1.89□□□□□ -2.11
SMCHD1-213ENST00000609587 S100A16Q96FQ6 103 aaKnown RBP1.89□□□□□ -2.11
SMCHD1-213ENST00000609587 OR8B2Q96RD0 313 aa1.89□□□□□ -2.11
SMCHD1-213ENST00000609587 KRTAP4-1Q9BYQ7 146 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms