RNA–Protein interactions for RNA: ENST00000609143.5

LINC01278-204, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 1 (best) BASIC

Gene LINC01278, Length 2,768 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-204ENST00000609143 OCIAD2Q56VL3 154 aa8.56□□□□□ -1.04
LINC01278-204ENST00000609143 PRSS3P2Q8NHM4 247 aa8.56□□□□□ -1.04
LINC01278-204ENST00000609143 HECTD1Q9ULT8 2610 aa8.56□□□□□ -1.04
LINC01278-204ENST00000609143 TRAV2A0A0B4J234 112 aa8.56□□□□□ -1.04
LINC01278-204ENST00000609143 FA2HQ7L5A8 372 aa8.56□□□□□ -1.04
LINC01278-204ENST00000609143 LINC01006Q8NI28 216 aa8.56□□□□□ -1.04
LINC01278-204ENST00000609143 DYNLRB2Q8TF09 96 aa8.56□□□□□ -1.04
LINC01278-204ENST00000609143 RNF114Q9Y508 228 aa8.56□□□□□ -1.04
LINC01278-204ENST00000609143 IGHV1-24A0A0C4DH33 117 aa8.55□□□□□ -1.04
LINC01278-204ENST00000609143 C3orf79P0CE67 100 aa8.55□□□□□ -1.04
LINC01278-204ENST00000609143 MED14OSP0DP75 135 aa8.55□□□□□ -1.04
LINC01278-204ENST00000609143 KIR3DS1Q14943 382 aa8.55□□□□□ -1.04
LINC01278-204ENST00000609143 FOXI2Q6ZQN5 318 aa8.55□□□□□ -1.04
LINC01278-204ENST00000609143 CST9LQ9H4G1 147 aa8.55□□□□□ -1.04
LINC01278-204ENST00000609143 AP5S1Q9NUS5 200 aa8.55□□□□□ -1.04
LINC01278-204ENST00000609143 CD28P10747 220 aa8.55□□□□□ -1.04
LINC01278-204ENST00000609143 TSPOP30536 169 aa8.55□□□□□ -1.04
LINC01278-204ENST00000609143 RNF185Q96GF1 192 aa8.55□□□□□ -1.04
LINC01278-204ENST00000609143 JMJD8Q96S16 334 aa8.55□□□□□ -1.04
LINC01278-204ENST00000609143 SMR3AQ99954 134 aa8.55□□□□□ -1.04
LINC01278-204ENST00000609143 TIMM8BQ9Y5J9 83 aaPredicted RBP8.55□□□□□ -1.04
LINC01278-204ENST00000609143 PMCHL1Q16048 86 aa8.54□□□□□ -1.04
LINC01278-204ENST00000609143 CFAP161Q6P656 301 aa8.54□□□□□ -1.04
LINC01278-204ENST00000609143 C11orf44Q8N8P7 122 aa8.54□□□□□ -1.04
LINC01278-204ENST00000609143 LAMTOR2Q9Y2Q5 125 aa8.54□□□□□ -1.04
LINC01278-204ENST00000609143 A0A1W2PRX2 142 aa8.54□□□□□ -1.04
LINC01278-204ENST00000609143 C7orf71A4D174 169 aa8.54□□□□□ -1.04
LINC01278-204ENST00000609143 A6NJY4 79 aa8.54□□□□□ -1.04
LINC01278-204ENST00000609143 FAM159AQ6UWV7 190 aa8.54□□□□□ -1.04
LINC01278-204ENST00000609143 RAX2Q96IS3 184 aa8.54□□□□□ -1.04
LINC01278-204ENST00000609143 TSSC4Q9Y5U2 329 aaPredicted RBP8.54□□□□□ -1.04
LINC01278-204ENST00000609143 SMKR1H3BMG3 65 aa8.53□□□□□ -1.04
LINC01278-204ENST00000609143 LEPROTL1O95214 131 aa8.53□□□□□ -1.04
LINC01278-204ENST00000609143 NCR2O95944 276 aa8.53□□□□□ -1.04
LINC01278-204ENST00000609143 IGKV3-20P01619 116 aa8.53□□□□□ -1.04
LINC01278-204ENST00000609143 TMEM61Q8N0U2 210 aa8.53□□□□□ -1.04
LINC01278-204ENST00000609143 PHLDA3Q9Y5J5 127 aa8.53□□□□□ -1.04
LINC01278-204ENST00000609143 LY6G6DO95868 133 aa8.53□□□□□ -1.04
LINC01278-204ENST00000609143 NPYP01303 97 aa8.53□□□□□ -1.04
LINC01278-204ENST00000609143 EVI2AP22794 236 aa8.53□□□□□ -1.04
LINC01278-204ENST00000609143 FHL3Q13643 280 aa8.53□□□□□ -1.04
LINC01278-204ENST00000609143 HIST2H2BDQ6DRA6 164 aa8.53□□□□□ -1.04
LINC01278-204ENST00000609143 SIGLEC8Q9NYZ4 499 aa8.53□□□□□ -1.04
LINC01278-204ENST00000609143 TRAV12-3A0A0B4J271 114 aa8.52□□□□□ -1.05
LINC01278-204ENST00000609143 LOC389332A0A1B0GUA5 103 aa8.52□□□□□ -1.05
LINC01278-204ENST00000609143 CCL24O00175 119 aa8.52□□□□□ -1.05
LINC01278-204ENST00000609143 IFI27P40305 119 aaPredicted RBP8.52□□□□□ -1.05
LINC01278-204ENST00000609143 Q8N976 141 aa8.52□□□□□ -1.05
LINC01278-204ENST00000609143 CITED2Q99967 270 aaPredicted RBP8.52□□□□□ -1.05
LINC01278-204ENST00000609143 GNRH2O43555 120 aa8.52□□□□□ -1.05
LINC01278-204ENST00000609143 NDUFA7O95182 113 aa8.52□□□□□ -1.05
LINC01278-204ENST00000609143 HNRNPA3P51991 378 aaKnown RBP8.52□□□□□ -1.05
LINC01278-204ENST00000609143 MAP1LC3AQ9H492 121 aa8.52□□□□□ -1.05
LINC01278-204ENST00000609143 SCRT2Q9NQ03 307 aa8.52□□□□□ -1.05
LINC01278-204ENST00000609143 UQCR10Q9UDW1 63 aa8.52□□□□□ -1.05
LINC01278-204ENST00000609143 MTORP42345 2549 aa8.52□□□□□ -1.05
LINC01278-204ENST00000609143 M0R381 172 aa8.51□□□□□ -1.05
LINC01278-204ENST00000609143 DEFB131AP59861 70 aa8.51□□□□□ -1.05
LINC01278-204ENST00000609143 DEFB114Q30KQ6 69 aa8.51□□□□□ -1.05
LINC01278-204ENST00000609143 HSPB8Q9UJY1 196 aa8.51□□□□□ -1.05
LINC01278-204ENST00000609143 HIVEP2P31629 2446 aa8.51□□□□□ -1.05
LINC01278-204ENST00000609143 TMEM70Q9BUB7 260 aa8.51□□□□□ -1.05
LINC01278-204ENST00000609143 OR4C46A6NHA9 309 aa8.5□□□□□ -1.05
LINC01278-204ENST00000609143 TNFRSF6BO95407 300 aa8.5□□□□□ -1.05
LINC01278-204ENST00000609143 RNASE3P12724 160 aaKnown RBP8.5□□□□□ -1.05
LINC01278-204ENST00000609143 SPINK13Q1W4C9 94 aa8.5□□□□□ -1.05
LINC01278-204ENST00000609143 Q6ZN92 141 aa8.5□□□□□ -1.05
LINC01278-204ENST00000609143 TRAV12-2A0A075B6T6 113 aa8.5□□□□□ -1.05
LINC01278-204ENST00000609143 HLA-DRB4P13762 266 aa8.5□□□□□ -1.05
LINC01278-204ENST00000609143 SPAG8Q99932 426 aaPredicted RBP8.5□□□□□ -1.05
LINC01278-204ENST00000609143 HLA-DRB4X5D2U9 266 aa8.5□□□□□ -1.05
LINC01278-204ENST00000609143 TRAV25A0A0B4J276 109 aa8.5□□□□□ -1.05
LINC01278-204ENST00000609143 KNCNA6PVL3 124 aa8.5□□□□□ -1.05
LINC01278-204ENST00000609143 CD7P09564 240 aa8.5□□□□□ -1.05
LINC01278-204ENST00000609143 HINT1P49773 126 aaPredicted RBP8.5□□□□□ -1.05
LINC01278-204ENST00000609143 CD300EQ496F6 205 aaPredicted RBP8.5□□□□□ -1.05
LINC01278-204ENST00000609143 SPATA45Q537H7 98 aa8.5□□□□□ -1.05
LINC01278-204ENST00000609143 AMTNQ6UX39 209 aa8.5□□□□□ -1.05
LINC01278-204ENST00000609143 IGLC3P0DOY3 106 aa8.49□□□□□ -1.05
LINC01278-204ENST00000609143 VAMP3Q15836 100 aa8.49□□□□□ -1.05
LINC01278-204ENST00000609143 MRAP2Q96G30 205 aa8.49□□□□□ -1.05
LINC01278-204ENST00000609143 AP1S3Q96PC3 154 aa8.49□□□□□ -1.05
LINC01278-204ENST00000609143 MAP1LC3CQ9BXW4 147 aa8.49□□□□□ -1.05
LINC01278-204ENST00000609143 DPH3P1Q9H4G8 78 aa8.49□□□□□ -1.05
LINC01278-204ENST00000609143 NXT2Q9NPJ8 142 aaKnown RBP8.49□□□□□ -1.05
LINC01278-204ENST00000609143 K7ERU9 68 aa8.49□□□□□ -1.05
LINC01278-204ENST00000609143 RIPPLY3P57055 190 aa8.49□□□□□ -1.05
LINC01278-204ENST00000609143 OR2K2Q8NGT1 345 aa8.49□□□□□ -1.05
LINC01278-204ENST00000609143 MAP6D1Q9H9H5 199 aa8.49□□□□□ -1.05
LINC01278-204ENST00000609143 A8MTW9 85 aa8.48□□□□□ -1.05
LINC01278-204ENST00000609143 H3BMM0 161 aa8.48□□□□□ -1.05
LINC01278-204ENST00000609143 SYS1-DBNDD2H3BUS1 97 aa8.48□□□□□ -1.05
LINC01278-204ENST00000609143 CRXO43186 299 aaPredicted RBP8.48□□□□□ -1.05
LINC01278-204ENST00000609143 NXPH4O95158 308 aa8.48□□□□□ -1.05
LINC01278-204ENST00000609143 LINC00173Q6ZV60 143 aa8.48□□□□□ -1.05
LINC01278-204ENST00000609143 IGHV1OR15-1A0A075B7D0 117 aa8.48□□□□□ -1.05
LINC01278-204ENST00000609143 SPRY2O43597 315 aa8.48□□□□□ -1.05
LINC01278-204ENST00000609143 GAS8-AS1O95177 125 aa8.48□□□□□ -1.05
LINC01278-204ENST00000609143 NOTCH2Q04721 2471 aa8.48□□□□□ -1.05
LINC01278-204ENST00000609143 AKAP9Q99996 3911 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms