RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 SH3BGRL3Q9H299 93 aa5.11□□□□□ -1.59
CUX1-219ENST00000606749 APOBP04114 4563 aaKnown RBP5.11□□□□□ -1.59
CUX1-219ENST00000606749 TRAV34A0A0B4J273 112 aa5.1□□□□□ -1.59
CUX1-219ENST00000606749 IGKV3D-20A0A0C4DH25 116 aa5.1□□□□□ -1.59
CUX1-219ENST00000606749 A0A1W2PRE2 83 aa5.1□□□□□ -1.59
CUX1-219ENST00000606749 PSCAO43653 123 aa5.1□□□□□ -1.59
CUX1-219ENST00000606749 IGHV3-30P01768 117 aa5.1□□□□□ -1.59
CUX1-219ENST00000606749 IGHV3-33P01772 117 aa5.1□□□□□ -1.59
CUX1-219ENST00000606749 IGHV3-30-3P0DP02 117 aa5.1□□□□□ -1.59
CUX1-219ENST00000606749 IGHV3-30-5P0DP03 117 aa5.1□□□□□ -1.59
CUX1-219ENST00000606749 MGST1P10620 155 aaKnown RBP5.1□□□□□ -1.59
CUX1-219ENST00000606749 ZNF726P1Q15940 193 aa5.1□□□□□ -1.59
CUX1-219ENST00000606749 ZFP69Q49AA0 526 aa5.1□□□□□ -1.59
CUX1-219ENST00000606749 OR10J3Q5JRS4 329 aa5.1□□□□□ -1.59
CUX1-219ENST00000606749 LELP1Q5T871 98 aa5.1□□□□□ -1.59
CUX1-219ENST00000606749 Q6ZSN1 163 aa5.1□□□□□ -1.59
CUX1-219ENST00000606749 ATP6V0E2Q8NHE4 81 aa5.1□□□□□ -1.59
CUX1-219ENST00000606749 GTSF1LQ9H1H1 148 aa5.1□□□□□ -1.59
CUX1-219ENST00000606749 BATF3Q9NR55 127 aa5.1□□□□□ -1.59
CUX1-219ENST00000606749 FABP5P3A8MUU1 101 aa5.09□□□□□ -1.59
CUX1-219ENST00000606749 PTTG1O95997 202 aa5.09□□□□□ -1.59
CUX1-219ENST00000606749 GIPP09681 153 aaPredicted RBP5.09□□□□□ -1.59
CUX1-219ENST00000606749 INAFM2P0DMQ5 153 aa5.09□□□□□ -1.59
CUX1-219ENST00000606749 PIK3CD-AS1Q5SR53 167 aa5.09□□□□□ -1.59
CUX1-219ENST00000606749 Q5VSD8 79 aa5.09□□□□□ -1.59
CUX1-219ENST00000606749 RPL7L1Q6DKI1 246 aaKnown RBP5.09□□□□□ -1.59
CUX1-219ENST00000606749 INO80EQ8NBZ0 244 aaPredicted RBP5.09□□□□□ -1.59
CUX1-219ENST00000606749 PARLQ9H300 379 aa5.09□□□□□ -1.59
CUX1-219ENST00000606749 ARL2-SNX15V9GYD0 113 aa5.09□□□□□ -1.59
CUX1-219ENST00000606749 DNAH5Q8TE73 4624 aa5.08□□□□□ -1.6
CUX1-219ENST00000606749 IGLV5-52A0A0A0MRZ9 124 aa5.08□□□□□ -1.6
CUX1-219ENST00000606749 BORCS7-ASMTA0A0B4J1R7 106 aa5.08□□□□□ -1.6
CUX1-219ENST00000606749 CTXND1A0A1B0GTU2 59 aa5.08□□□□□ -1.6
CUX1-219ENST00000606749 RNF222A6NCQ9 220 aa5.08□□□□□ -1.6
CUX1-219ENST00000606749 A8MWV9 139 aa5.08□□□□□ -1.6
CUX1-219ENST00000606749 IFNA7P01567 189 aa5.08□□□□□ -1.6
CUX1-219ENST00000606749 SMR3BP02814 79 aaPredicted RBP5.08□□□□□ -1.6
CUX1-219ENST00000606749 S100A4P26447 101 aaKnown RBP5.08□□□□□ -1.6
CUX1-219ENST00000606749 CRIP1P50238 77 aa5.08□□□□□ -1.6
CUX1-219ENST00000606749 UBE2G2P60604 165 aa5.08□□□□□ -1.6
CUX1-219ENST00000606749 LGALSLQ3ZCW2 172 aaPredicted RBP5.08□□□□□ -1.6
CUX1-219ENST00000606749 LINC01559Q495D7 138 aa5.08□□□□□ -1.6
CUX1-219ENST00000606749 UFSP1Q6NVU6 142 aa5.08□□□□□ -1.6
CUX1-219ENST00000606749 ZFP2Q6ZN57 461 aa5.08□□□□□ -1.6
CUX1-219ENST00000606749 OR2T35Q8NGX2 323 aa5.08□□□□□ -1.6
CUX1-219ENST00000606749 NTN5Q8WTR8 489 aaPredicted RBP5.08□□□□□ -1.6
CUX1-219ENST00000606749 FRZBQ92765 325 aa5.08□□□□□ -1.6
CUX1-219ENST00000606749 JPT2Q9H910 190 aa5.08□□□□□ -1.6
CUX1-219ENST00000606749 Q9HAA7 133 aa5.08□□□□□ -1.6
CUX1-219ENST00000606749 IL36BQ9NZH7 164 aa5.08□□□□□ -1.6
CUX1-219ENST00000606749 Q9UF83 564 aa5.08□□□□□ -1.6
CUX1-219ENST00000606749 FXYD6-FXYD2A0A087WZ82 144 aa5.07□□□□□ -1.6
CUX1-219ENST00000606749 GAGE12JA6NER3 117 aa5.07□□□□□ -1.6
CUX1-219ENST00000606749 FAM74A7A6NL05 159 aa5.07□□□□□ -1.6
CUX1-219ENST00000606749 B4DEV8 164 aa5.07□□□□□ -1.6
CUX1-219ENST00000606749 KRBOX1C9JBD0 128 aa5.07□□□□□ -1.6
CUX1-219ENST00000606749 PEX7O00628 323 aa5.07□□□□□ -1.6
CUX1-219ENST00000606749 LINC00694P0DN24 101 aa5.07□□□□□ -1.6
CUX1-219ENST00000606749 ASIPP42127 132 aa5.07□□□□□ -1.6
CUX1-219ENST00000606749 FGF8P55075 233 aaPredicted RBP5.07□□□□□ -1.6
CUX1-219ENST00000606749 GAGE1Q13065 139 aa5.07□□□□□ -1.6
CUX1-219ENST00000606749 GAGE4Q13068 117 aa5.07□□□□□ -1.6
CUX1-219ENST00000606749 GAGE5Q13069 117 aa5.07□□□□□ -1.6
CUX1-219ENST00000606749 LAGE3Q14657 143 aa5.07□□□□□ -1.6
CUX1-219ENST00000606749 GAGE13Q4V321 117 aa5.07□□□□□ -1.6
CUX1-219ENST00000606749 DNLZQ5SXM8 178 aa5.07□□□□□ -1.6
CUX1-219ENST00000606749 COX8CQ7Z4L0 72 aa5.07□□□□□ -1.6
CUX1-219ENST00000606749 Q8N3U1 123 aa5.07□□□□□ -1.6
CUX1-219ENST00000606749 Q8N814 137 aa5.07□□□□□ -1.6
CUX1-219ENST00000606749 HIST1H2BAQ96A08 127 aa5.07□□□□□ -1.6
CUX1-219ENST00000606749 TMEM70Q9BUB7 260 aa5.07□□□□□ -1.6
CUX1-219ENST00000606749 SAMD10Q9BYL1 202 aa5.07□□□□□ -1.6
CUX1-219ENST00000606749 NKX6-2Q9C056 277 aaPredicted RBP5.07□□□□□ -1.6
CUX1-219ENST00000606749 FAM229AH3BQW9 127 aa5.06□□□□□ -1.6
CUX1-219ENST00000606749 ARMS2P0C7Q2 107 aa5.06□□□□□ -1.6
CUX1-219ENST00000606749 HAMPP81172 84 aa5.06□□□□□ -1.6
CUX1-219ENST00000606749 AKR1C8PQ5T2L2 129 aa5.06□□□□□ -1.6
CUX1-219ENST00000606749 Q86TA4 180 aa5.06□□□□□ -1.6
CUX1-219ENST00000606749 C14orf178Q8N769 122 aaPredicted RBP5.06□□□□□ -1.6
CUX1-219ENST00000606749 ZC2HC1AQ96GY0 325 aa5.06□□□□□ -1.6
CUX1-219ENST00000606749 TM2D2Q9BX73 214 aa5.06□□□□□ -1.6
CUX1-219ENST00000606749 FAM30AQ9NZY2 134 aa5.06□□□□□ -1.6
CUX1-219ENST00000606749 ZFP30Q9Y2G7 519 aa5.06□□□□□ -1.6
CUX1-219ENST00000606749 A0A087WWC5 75 aa5.05□□□□□ -1.6
CUX1-219ENST00000606749 TRAV8-3A0A0A6YYJ7 113 aa5.05□□□□□ -1.6
CUX1-219ENST00000606749 G3V3Q6 166 aa5.05□□□□□ -1.6
CUX1-219ENST00000606749 H3BVH4 76 aa5.05□□□□□ -1.6
CUX1-219ENST00000606749 M0R036 132 aa5.05□□□□□ -1.6
CUX1-219ENST00000606749 SH2D1AO60880 128 aa5.05□□□□□ -1.6
CUX1-219ENST00000606749 WFDC2Q14508 124 aa5.05□□□□□ -1.6
CUX1-219ENST00000606749 ZNF674Q2M3X9 581 aa5.05□□□□□ -1.6
CUX1-219ENST00000606749 FAM162BQ5T6X4 162 aa5.05□□□□□ -1.6
CUX1-219ENST00000606749 DAZ4Q86SG3 579 aaKnown RBP5.05□□□□□ -1.6
CUX1-219ENST00000606749 SYT8Q8NBV8 401 aa5.05□□□□□ -1.6
CUX1-219ENST00000606749 SFRP2Q96HF1 295 aa5.05□□□□□ -1.6
CUX1-219ENST00000606749 FMC1Q96HJ9 113 aa5.05□□□□□ -1.6
CUX1-219ENST00000606749 DAZ3Q9NR90 486 aaKnown RBP5.05□□□□□ -1.6
CUX1-219ENST00000606749 CYTL1Q9NRR1 136 aa5.05□□□□□ -1.6
CUX1-219ENST00000606749 A0A087WWL8 130 aa5.04□□□□□ -1.6
CUX1-219ENST00000606749 TRBV6-1A0A0K0K1D8 114 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms