RNA–Protein interactions for RNA: ENST00000604236.5

FGFR2-222, Transcript of fibroblast growth factor receptor 2, human

TSL 1 (best)

Gene FGFR2, Length 3,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR2-222	ENST00000604236	ZFAND3	Q9H8U3	227 aa		11.73	□□□□□ -0.53
FGFR2-222	ENST00000604236	DEFB131A	P59861	70 aa		11.73	□□□□□ -0.53
FGFR2-222	ENST00000604236	C10orf105	Q8TEF2	133 aa		11.73	□□□□□ -0.53
FGFR2-222	ENST00000604236	TRAV8-2	A0A0B4J237	113 aa		11.73	□□□□□ -0.53
FGFR2-222	ENST00000604236	RPL39	P62891	51 aa	Known RBP	11.73	□□□□□ -0.53
FGFR2-222	ENST00000604236	DYNLRB2	Q8TF09	96 aa		11.73	□□□□□ -0.53
FGFR2-222	ENST00000604236	HIST1H4G	Q99525	98 aa		11.73	□□□□□ -0.53
FGFR2-222	ENST00000604236	GAGE10	A6NGK3	116 aa		11.72	□□□□□ -0.53
FGFR2-222	ENST00000604236	MRPS12	O15235	138 aa	Known RBP	11.72	□□□□□ -0.53
FGFR2-222	ENST00000604236	SFTPC	P11686	197 aa		11.72	□□□□□ -0.53
FGFR2-222	ENST00000604236	IGKV2D-26	A0A0A0MRZ7	120 aa		11.72	□□□□□ -0.53
FGFR2-222	ENST00000604236	CSTL1	Q9H114	145 aa		11.72	□□□□□ -0.53
FGFR2-222	ENST00000604236		P0DMU3	169 aa		11.72	□□□□□ -0.53
FGFR2-222	ENST00000604236	FAM231A	P0DMU4	169 aa		11.72	□□□□□ -0.53
FGFR2-222	ENST00000604236	FAM231C	P0DMU5	169 aa		11.72	□□□□□ -0.53
FGFR2-222	ENST00000604236	KLHL30-AS1	Q8NEE0	82 aa		11.72	□□□□□ -0.53
FGFR2-222	ENST00000604236	SPOCK3	Q9BQ16	436 aa		11.72	□□□□□ -0.53
FGFR2-222	ENST00000604236	XCL2	Q9UBD3	114 aa		11.72	□□□□□ -0.53
FGFR2-222	ENST00000604236	TRBV7-1	A0A0A6YYK4	115 aa		11.71	□□□□□ -0.53
FGFR2-222	ENST00000604236	PDE6H	Q13956	83 aa		11.71	□□□□□ -0.53
FGFR2-222	ENST00000604236	AMTN	Q6UX39	209 aa		11.71	□□□□□ -0.53
FGFR2-222	ENST00000604236	SLC50A1	Q9BRV3	221 aa		11.71	□□□□□ -0.53
FGFR2-222	ENST00000604236	MDFIC	Q9P1T7	246 aa		11.71	□□□□□ -0.53
FGFR2-222	ENST00000604236		Q5PR19	223 aa		11.71	□□□□□ -0.54
FGFR2-222	ENST00000604236	LYPD1	Q8N2G4	141 aa		11.71	□□□□□ -0.54
FGFR2-222	ENST00000604236	PEF1	Q9UBV8	284 aa	Known RBP	11.71	□□□□□ -0.54
FGFR2-222	ENST00000604236	LOC107984156	A0A0G2JMH3	177 aa		11.7	□□□□□ -0.54
FGFR2-222	ENST00000604236	ARL17A	Q8IVW1	177 aa		11.7	□□□□□ -0.54
FGFR2-222	ENST00000604236	CTRL	P40313	264 aa		11.7	□□□□□ -0.54
FGFR2-222	ENST00000604236	SMIM12	Q96EX1	92 aa		11.7	□□□□□ -0.54
FGFR2-222	ENST00000604236	STAB1	Q9NY15	2570 aa		11.7	□□□□□ -0.54
FGFR2-222	ENST00000604236	TMEM97	Q5BJF2	176 aa		11.7	□□□□□ -0.54
FGFR2-222	ENST00000604236	PET117	Q6UWS5	81 aa		11.7	□□□□□ -0.54
FGFR2-222	ENST00000604236	PIFO	Q8TCI5	191 aa		11.7	□□□□□ -0.54
FGFR2-222	ENST00000604236	DAZ1	Q9NQZ3	744 aa	Known RBP	11.7	□□□□□ -0.54
FGFR2-222	ENST00000604236	PRSS2	P07478	247 aa		11.69	□□□□□ -0.54
FGFR2-222	ENST00000604236	GFRA4	Q9GZZ7	299 aa		11.69	□□□□□ -0.54
FGFR2-222	ENST00000604236	FAM231B	A6NCW3	169 aa		11.69	□□□□□ -0.54
FGFR2-222	ENST00000604236	KLF5	Q13887	457 aa	Predicted RBP	11.69	□□□□□ -0.54
FGFR2-222	ENST00000604236	CEMP1	Q6PRD7	247 aa	Predicted RBP	11.69	□□□□□ -0.54
FGFR2-222	ENST00000604236		Q8N6K4	173 aa		11.69	□□□□□ -0.54
FGFR2-222	ENST00000604236	RNASE8	Q8TDE3	154 aa	Known RBP	11.69	□□□□□ -0.54
FGFR2-222	ENST00000604236	PROK1	P58294	105 aa		11.68	□□□□□ -0.54
FGFR2-222	ENST00000604236	CT83	Q5H943	113 aa		11.68	□□□□□ -0.54
FGFR2-222	ENST00000604236	OR11H1	Q8NG94	326 aa		11.68	□□□□□ -0.54
FGFR2-222	ENST00000604236	SRSF8	Q9BRL6	282 aa	Known RBP	11.68	□□□□□ -0.54
FGFR2-222	ENST00000604236	TRAV21	A0A0B4J279	112 aa		11.68	□□□□□ -0.54
FGFR2-222	ENST00000604236	PRORY	Q9H606	182 aa		11.68	□□□□□ -0.54
FGFR2-222	ENST00000604236	IGHV4OR15-8	A0A075B7B6	117 aa		11.68	□□□□□ -0.54
FGFR2-222	ENST00000604236		A0A087WW49	117 aa		11.68	□□□□□ -0.54
FGFR2-222	ENST00000604236	PRSS29P	A6NIE9	313 aa		11.68	□□□□□ -0.54
FGFR2-222	ENST00000604236	NSUN5P1	Q3KNT7	163 aa		11.68	□□□□□ -0.54
FGFR2-222	ENST00000604236	ZNF876P	Q49A33	203 aa		11.68	□□□□□ -0.54
FGFR2-222	ENST00000604236	BVES-AS1	Q5T3Y7	98 aa		11.68	□□□□□ -0.54
FGFR2-222	ENST00000604236	RPS20	P60866	119 aa	Known RBP	11.67	□□□□□ -0.54
FGFR2-222	ENST00000604236	TCTEX1D4	Q5JR98	221 aa		11.67	□□□□□ -0.54
FGFR2-222	ENST00000604236	C12orf54	Q6X4T0	127 aa		11.67	□□□□□ -0.54
FGFR2-222	ENST00000604236	OOSP1	A8MZH6	123 aa		11.67	□□□□□ -0.54
FGFR2-222	ENST00000604236	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	11.67	□□□□□ -0.54
FGFR2-222	ENST00000604236	COX11	Q9Y6N1	276 aa		11.67	□□□□□ -0.54
FGFR2-222	ENST00000604236		A0A0G2JLM5	398 aa		11.66	□□□□□ -0.54
FGFR2-222	ENST00000604236	PCP4	P48539	62 aa		11.66	□□□□□ -0.54
FGFR2-222	ENST00000604236	WFDC11	Q8NEX6	87 aa		11.66	□□□□□ -0.54
FGFR2-222	ENST00000604236	ZNF625	Q96I27	306 aa	Predicted RBP	11.66	□□□□□ -0.54
FGFR2-222	ENST00000604236	MS4A6A	Q9H2W1	248 aa		11.66	□□□□□ -0.54
FGFR2-222	ENST00000604236	IGKC	P01834	107 aa		11.66	□□□□□ -0.54
FGFR2-222	ENST00000604236	SNRPD3	P62318	126 aa	Known RBP	11.66	□□□□□ -0.54
FGFR2-222	ENST00000604236	OR1N2	Q8NGR9	330 aa		11.66	□□□□□ -0.54
FGFR2-222	ENST00000604236	LINC01587	Q99440	93 aa		11.66	□□□□□ -0.54
FGFR2-222	ENST00000604236		A0A096LNJ9	63 aa		11.65	□□□□□ -0.54
FGFR2-222	ENST00000604236	RPL35A	P18077	110 aa	Known RBP	11.65	□□□□□ -0.54
FGFR2-222	ENST00000604236	ID1	P41134	155 aa		11.65	□□□□□ -0.54
FGFR2-222	ENST00000604236	PAX2	Q02962	417 aa		11.65	□□□□□ -0.54
FGFR2-222	ENST00000604236	LAGE3	Q14657	143 aa		11.65	□□□□□ -0.54
FGFR2-222	ENST00000604236		Q6AWC8	147 aa		11.65	□□□□□ -0.54
FGFR2-222	ENST00000604236	ST20	Q9HBF5	79 aa		11.65	□□□□□ -0.54
FGFR2-222	ENST00000604236	YAE1D1	Q9NRH1	226 aa		11.65	□□□□□ -0.54
FGFR2-222	ENST00000604236	NPIPB6	E9PJ23	425 aa		11.65	□□□□□ -0.54
FGFR2-222	ENST00000604236	DUSP14	O95147	198 aa	Known RBP	11.65	□□□□□ -0.54
FGFR2-222	ENST00000604236	HOXD3	P31249	432 aa	Predicted RBP	11.65	□□□□□ -0.54
FGFR2-222	ENST00000604236	RNF185	Q96GF1	192 aa		11.64	□□□□□ -0.55
FGFR2-222	ENST00000604236	MEGF9	Q9H1U4	602 aa		11.64	□□□□□ -0.55
FGFR2-222	ENST00000604236	SMR3A	Q99954	134 aa		11.64	□□□□□ -0.55
FGFR2-222	ENST00000604236	PDZD2	O15018	2839 aa		11.64	□□□□□ -0.55
FGFR2-222	ENST00000604236	CD5L	O43866	347 aa		11.64	□□□□□ -0.55
FGFR2-222	ENST00000604236	C2orf66	Q6UXQ4	117 aa		11.64	□□□□□ -0.55
FGFR2-222	ENST00000604236	IGHV7-4-1	A0A0J9YVY3	117 aa		11.63	□□□□□ -0.55
FGFR2-222	ENST00000604236	CIDEA	O60543	219 aa		11.63	□□□□□ -0.55
FGFR2-222	ENST00000604236	SAP30	O75446	220 aa		11.63	□□□□□ -0.55
FGFR2-222	ENST00000604236	TP53TG1	Q9Y2A0	90 aa		11.63	□□□□□ -0.55
FGFR2-222	ENST00000604236	C9orf139	Q6ZV77	190 aa		11.63	□□□□□ -0.55
FGFR2-222	ENST00000604236	ZNF418	Q8TF45	676 aa	Predicted RBP	11.63	□□□□□ -0.55
FGFR2-222	ENST00000604236	FXYD2	P54710	66 aa		11.63	□□□□□ -0.55
FGFR2-222	ENST00000604236	SUMO2	P61956	95 aa	Known RBP	11.63	□□□□□ -0.55
FGFR2-222	ENST00000604236		Q1RN00	199 aa		11.63	□□□□□ -0.55
FGFR2-222	ENST00000604236	COL6A5	A8TX70	2615 aa		11.62	□□□□□ -0.55
FGFR2-222	ENST00000604236	OR11H12	B2RN74	326 aa		11.62	□□□□□ -0.55
FGFR2-222	ENST00000604236	DPM2	O94777	84 aa		11.62	□□□□□ -0.55
FGFR2-222	ENST00000604236	SCGB1C2	P0DMR2	95 aa		11.62	□□□□□ -0.55
FGFR2-222	ENST00000604236	OR11H2	Q8NH07	326 aa		11.62	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms