RNA–Protein interactions for RNA: ENST00000603731.1

HERPUD2-207, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-207ENST00000603731 ZNF575Q86XF7 245 aa9.27□□□□□ -0.93
HERPUD2-207ENST00000603731 ZFP82Q8N141 532 aa9.27□□□□□ -0.93
HERPUD2-207ENST00000603731 SSBP4Q9BWG4 385 aaPredicted RBP9.27□□□□□ -0.93
HERPUD2-207ENST00000603731 PHLDA3Q9Y5J5 127 aa9.27□□□□□ -0.93
HERPUD2-207ENST00000603731 IGHV3OR16-12A0A075B7B8 117 aa9.26□□□□□ -0.93
HERPUD2-207ENST00000603731 LOC102724200A0A096LPH7 203 aaPredicted RBP9.26□□□□□ -0.93
HERPUD2-207ENST00000603731 APCSP02743 223 aa9.26□□□□□ -0.93
HERPUD2-207ENST00000603731 NTF3P20783 257 aa9.26□□□□□ -0.93
HERPUD2-207ENST00000603731 SMIM15Q7Z3B0 74 aa9.26□□□□□ -0.93
HERPUD2-207ENST00000603731 Q8N1Y9 231 aa9.26□□□□□ -0.93
HERPUD2-207ENST00000603731 CSTL1Q9H114 145 aa9.26□□□□□ -0.93
HERPUD2-207ENST00000603731 TP53TG3Q9ULZ0 132 aa9.26□□□□□ -0.93
HERPUD2-207ENST00000603731 IGHV3-16A0A0C4DH30 117 aa9.25□□□□□ -0.93
HERPUD2-207ENST00000603731 RNASE3P12724 160 aaKnown RBP9.25□□□□□ -0.93
HERPUD2-207ENST00000603731 ZNF415Q09FC8 603 aa9.25□□□□□ -0.93
HERPUD2-207ENST00000603731 OR10AG1Q8NH19 301 aa9.25□□□□□ -0.93
HERPUD2-207ENST00000603731 LINC00467Q9BRT7 94 aa9.25□□□□□ -0.93
HERPUD2-207ENST00000603731 CNFNQ9BYD5 112 aa9.25□□□□□ -0.93
HERPUD2-207ENST00000603731 M0R381 172 aa9.24□□□□□ -0.93
HERPUD2-207ENST00000603731 TRGC1P0CF51 173 aa9.24□□□□□ -0.93
HERPUD2-207ENST00000603731 APOC4P55056 127 aa9.24□□□□□ -0.93
HERPUD2-207ENST00000603731 EGFEM1PQ0D2K5 195 aa9.24□□□□□ -0.93
HERPUD2-207ENST00000603731 C1orf158Q8N1D5 194 aa9.24□□□□□ -0.93
HERPUD2-207ENST00000603731 GATD1Q8NB37 220 aa9.24□□□□□ -0.93
HERPUD2-207ENST00000603731 SYT8Q8NBV8 401 aa9.24□□□□□ -0.93
HERPUD2-207ENST00000603731 EPPK1P58107 5090 aaKnown RBP9.23□□□□□ -0.93
HERPUD2-207ENST00000603731 IGHV4-4A0A075B6R2 117 aa9.23□□□□□ -0.93
HERPUD2-207ENST00000603731 C9orf85Q96MD7 179 aa9.23□□□□□ -0.93
HERPUD2-207ENST00000603731 SCRT2Q9NQ03 307 aa9.23□□□□□ -0.93
HERPUD2-207ENST00000603731 MDFICQ9P1T7 246 aa9.23□□□□□ -0.93
HERPUD2-207ENST00000603731 KIR2DL5BA0A0G2JN68 375 aa9.22□□□□□ -0.93
HERPUD2-207ENST00000603731 KIR2DL5BA0A0G2JPC4 375 aa9.22□□□□□ -0.93
HERPUD2-207ENST00000603731 G3V4G9 280 aa9.22□□□□□ -0.93
HERPUD2-207ENST00000603731 S100A6P06703 90 aa9.22□□□□□ -0.93
HERPUD2-207ENST00000603731 GIG44P09565 113 aaPredicted RBP9.22□□□□□ -0.93
HERPUD2-207ENST00000603731 KRTAP10-11P60412 298 aa9.22□□□□□ -0.93
HERPUD2-207ENST00000603731 SLAQ13239 276 aa9.22□□□□□ -0.93
HERPUD2-207ENST00000603731 KIAA1644Q3SXP7 199 aa9.22□□□□□ -0.93
HERPUD2-207ENST00000603731 ZNF493Q6ZR52 646 aa9.22□□□□□ -0.93
HERPUD2-207ENST00000603731 KIR2DL5AQ8N109 375 aa9.22□□□□□ -0.93
HERPUD2-207ENST00000603731 KIR2DL5BQ8NHK3 375 aa9.22□□□□□ -0.93
HERPUD2-207ENST00000603731 TMEM191AQ9H0A3 160 aa9.22□□□□□ -0.93
HERPUD2-207ENST00000603731 MSRB1Q9NZV6 116 aa9.22□□□□□ -0.93
HERPUD2-207ENST00000603731 PHOX2AO14813 284 aa9.21□□□□□ -0.94
HERPUD2-207ENST00000603731 SPRY2O43597 315 aa9.21□□□□□ -0.94
HERPUD2-207ENST00000603731 SAMD5Q5TGI4 173 aa9.21□□□□□ -0.94
HERPUD2-207ENST00000603731 RCHY1Q96PM5 261 aa9.21□□□□□ -0.94
HERPUD2-207ENST00000603731 MUC4Q99102 2169 aa9.21□□□□□ -0.94
HERPUD2-207ENST00000603731 HIST1H2BKO60814 126 aa9.2□□□□□ -0.94
HERPUD2-207ENST00000603731 HIST1H2BJP06899 126 aa9.2□□□□□ -0.94
HERPUD2-207ENST00000603731 SMIM17P0DL12 118 aa9.2□□□□□ -0.94
HERPUD2-207ENST00000603731 IGHV4-30-4P0DP06 118 aa9.2□□□□□ -0.94
HERPUD2-207ENST00000603731 HIST1H2BOP23527 126 aa9.2□□□□□ -0.94
HERPUD2-207ENST00000603731 HIST1H2BBP33778 126 aa9.2□□□□□ -0.94
HERPUD2-207ENST00000603731 NDUFA6P56556 154 aa9.2□□□□□ -0.94
HERPUD2-207ENST00000603731 HIST1H2BDP58876 126 aa9.2□□□□□ -0.94
HERPUD2-207ENST00000603731 HIST1H2BCP62807 126 aa9.2□□□□□ -0.94
HERPUD2-207ENST00000603731 HIST2H2BEQ16778 126 aa9.2□□□□□ -0.94
HERPUD2-207ENST00000603731 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.2□□□□□ -0.94
HERPUD2-207ENST00000603731 DMRTA1Q5VZB9 504 aa9.2□□□□□ -0.94
HERPUD2-207ENST00000603731 FAM104BQ5XKR9 115 aa9.2□□□□□ -0.94
HERPUD2-207ENST00000603731 AMN1Q8IY45 258 aa9.2□□□□□ -0.94
HERPUD2-207ENST00000603731 CSNK1G2-AS1Q8NCQ2 148 aa9.2□□□□□ -0.94
HERPUD2-207ENST00000603731 HIST1H2BHQ93079 126 aa9.2□□□□□ -0.94
HERPUD2-207ENST00000603731 AP1S3Q96PC3 154 aa9.2□□□□□ -0.94
HERPUD2-207ENST00000603731 HIST1H2BNQ99877 126 aa9.2□□□□□ -0.94
HERPUD2-207ENST00000603731 HIST1H2BMQ99879 126 aa9.2□□□□□ -0.94
HERPUD2-207ENST00000603731 SPXQ9BT56 116 aa9.2□□□□□ -0.94
HERPUD2-207ENST00000603731 NOTCH3Q9UM47 2321 aa9.19□□□□□ -0.94
HERPUD2-207ENST00000603731 M0R2P5 195 aa9.19□□□□□ -0.94
HERPUD2-207ENST00000603731 UBE2CO00762 179 aa9.19□□□□□ -0.94
HERPUD2-207ENST00000603731 NXPH4O95158 308 aa9.19□□□□□ -0.94
HERPUD2-207ENST00000603731 PRM2P04554 102 aa9.19□□□□□ -0.94
HERPUD2-207ENST00000603731 EVI2AP22794 236 aa9.19□□□□□ -0.94
HERPUD2-207ENST00000603731 SRIP30626 198 aa9.19□□□□□ -0.94
HERPUD2-207ENST00000603731 RRN3P1Q2M238 152 aa9.19□□□□□ -0.94
HERPUD2-207ENST00000603731 TMEM263Q8WUH6 116 aaKnown RBP9.19□□□□□ -0.94
HERPUD2-207ENST00000603731 DPH3P1Q9H4G8 78 aa9.19□□□□□ -0.94
HERPUD2-207ENST00000603731 GSN-AS1Q9NRJ2 163 aa9.19□□□□□ -0.94
HERPUD2-207ENST00000603731 TENM3Q9P273 2699 aa9.19□□□□□ -0.94
HERPUD2-207ENST00000603731 AZU1P20160 251 aa9.18□□□□□ -0.94
HERPUD2-207ENST00000603731 ZNF876PQ49A33 203 aa9.18□□□□□ -0.94
HERPUD2-207ENST00000603731 ZNF705AQ6ZN79 300 aaPredicted RBP9.18□□□□□ -0.94
HERPUD2-207ENST00000603731 C16orf74Q96GX8 76 aa9.18□□□□□ -0.94
HERPUD2-207ENST00000603731 MGPP08493 103 aa9.17□□□□□ -0.94
HERPUD2-207ENST00000603731 RAB4AP20338 218 aa9.17□□□□□ -0.94
HERPUD2-207ENST00000603731 CKS2P33552 79 aa9.17□□□□□ -0.94
HERPUD2-207ENST00000603731 MRPL51Q4U2R6 128 aaKnown RBP9.17□□□□□ -0.94
HERPUD2-207ENST00000603731 C14orf178Q8N769 122 aaPredicted RBP9.17□□□□□ -0.94
HERPUD2-207ENST00000603731 C11orf72Q8NBR9 251 aa9.17□□□□□ -0.94
HERPUD2-207ENST00000603731 SMIM9A6NGZ8 99 aa9.16□□□□□ -0.94
HERPUD2-207ENST00000603731 A8MZ25 164 aa9.16□□□□□ -0.94
HERPUD2-207ENST00000603731 BAGE3Q86Y29 109 aa9.16□□□□□ -0.94
HERPUD2-207ENST00000603731 ORMDL3Q8N138 153 aa9.16□□□□□ -0.94
HERPUD2-207ENST00000603731 RNASE8Q8TDE3 154 aaKnown RBP9.16□□□□□ -0.94
HERPUD2-207ENST00000603731 PTH2Q96A98 100 aa9.16□□□□□ -0.94
HERPUD2-207ENST00000603731 RNF185Q96GF1 192 aa9.16□□□□□ -0.94
HERPUD2-207ENST00000603731 ALKBH7Q9BT30 221 aaPredicted RBP9.16□□□□□ -0.94
HERPUD2-207ENST00000603731 D6R8Y8 96 aa9.15□□□□□ -0.94
HERPUD2-207ENST00000603731 PPBPP02775 128 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms