RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 TIMM8BQ9Y5J9 83 aaPredicted RBP3.73□□□□□ -1.81
SPTBN1-206ENST00000602898 SLC25A15Q9Y619 301 aa3.73□□□□□ -1.81
SPTBN1-206ENST00000602898 SS18Q15532 418 aa3.72□□□□□ -1.81
SPTBN1-206ENST00000602898 SDIM1Q6ZPB5 146 aa3.72□□□□□ -1.81
SPTBN1-206ENST00000602898 USP34Q70CQ2 3546 aa3.72□□□□□ -1.81
SPTBN1-206ENST00000602898 TMEM256-PLSCR3K7ERE1 68 aa3.72□□□□□ -1.81
SPTBN1-206ENST00000602898 IGHG2P01859 326 aa3.72□□□□□ -1.81
SPTBN1-206ENST00000602898 ATXN8Q156A1 80 aa3.72□□□□□ -1.81
SPTBN1-206ENST00000602898 FP248Q71RG6 208 aaPredicted RBP3.72□□□□□ -1.81
SPTBN1-206ENST00000602898 MDP1Q86V88 176 aa3.72□□□□□ -1.81
SPTBN1-206ENST00000602898 TTTY13Q9BZ97 58 aa3.72□□□□□ -1.81
SPTBN1-206ENST00000602898 DKK2Q9UBU2 259 aa3.72□□□□□ -1.81
SPTBN1-206ENST00000602898 EML6Q6ZMW3 1958 aa3.72□□□□□ -1.81
SPTBN1-206ENST00000602898 IGHV4-30-4P0DP06 118 aa3.71□□□□□ -1.81
SPTBN1-206ENST00000602898 NDUFA11Q86Y39 141 aa3.71□□□□□ -1.81
SPTBN1-206ENST00000602898 LYZL4Q96KX0 146 aa3.71□□□□□ -1.81
SPTBN1-206ENST00000602898 DEFB127Q9H1M4 99 aa3.71□□□□□ -1.81
SPTBN1-206ENST00000602898 HEATR1Q9H583 2144 aaKnown RBP3.71□□□□□ -1.81
SPTBN1-206ENST00000602898 CCL28Q9NRJ3 127 aa3.71□□□□□ -1.81
SPTBN1-206ENST00000602898 VCANP13611 3396 aa3.71□□□□□ -1.82
SPTBN1-206ENST00000602898 IGHV3-20A0A0C4DH32 117 aa3.71□□□□□ -1.82
SPTBN1-206ENST00000602898 TRBV7-6A0A0J9YX20 115 aa3.71□□□□□ -1.82
SPTBN1-206ENST00000602898 FSTL3O95633 263 aa3.71□□□□□ -1.82
SPTBN1-206ENST00000602898 PCBD1P61457 104 aa3.71□□□□□ -1.82
SPTBN1-206ENST00000602898 FAM104BQ5XKR9 115 aa3.71□□□□□ -1.82
SPTBN1-206ENST00000602898 CXCL17Q6UXB2 119 aa3.71□□□□□ -1.82
SPTBN1-206ENST00000602898 NABP2Q9BQ15 211 aa3.71□□□□□ -1.82
SPTBN1-206ENST00000602898 BAHCC1Q9P281 2608 aa3.71□□□□□ -1.82
SPTBN1-206ENST00000602898 MYO7AQ13402 2215 aa3.71□□□□□ -1.82
SPTBN1-206ENST00000602898 ZNF407Q9C0G0 2248 aa3.71□□□□□ -1.82
SPTBN1-206ENST00000602898 PIGYQ3MUY2 71 aa3.71□□□□□ -1.82
SPTBN1-206ENST00000602898 LINC00242Q5T6M2 205 aa3.71□□□□□ -1.82
SPTBN1-206ENST00000602898 LCE4AQ5TA78 99 aa3.71□□□□□ -1.82
SPTBN1-206ENST00000602898 CCL13Q99616 98 aa3.71□□□□□ -1.82
SPTBN1-206ENST00000602898 CTSZQ9UBR2 303 aa3.71□□□□□ -1.82
SPTBN1-206ENST00000602898 LRP4O75096 1905 aa3.7□□□□□ -1.82
SPTBN1-206ENST00000602898 IGKV1-39P01597 117 aa3.7□□□□□ -1.82
SPTBN1-206ENST00000602898 IGLV3-1P01715 115 aa3.7□□□□□ -1.82
SPTBN1-206ENST00000602898 IGKV1D-39P04432 117 aa3.7□□□□□ -1.82
SPTBN1-206ENST00000602898 EDDM3BP56851 147 aa3.7□□□□□ -1.82
SPTBN1-206ENST00000602898 SYNJ2BPP57105 145 aa3.7□□□□□ -1.82
SPTBN1-206ENST00000602898 KIAA0087Q14695 138 aa3.7□□□□□ -1.82
SPTBN1-206ENST00000602898 IGHV3OR16-9A0A0B4J2B5 98 aa3.7□□□□□ -1.82
SPTBN1-206ENST00000602898 TRGV8A0A0C4DH27 118 aa3.7□□□□□ -1.82
SPTBN1-206ENST00000602898 IGKV1-5P01602 117 aa3.7□□□□□ -1.82
SPTBN1-206ENST00000602898 IGHV1-2P23083 117 aa3.7□□□□□ -1.82
SPTBN1-206ENST00000602898 KRTAP19-1Q8IUB9 90 aa3.7□□□□□ -1.82
SPTBN1-206ENST00000602898 RPP21Q9H633 154 aaKnown RBP3.7□□□□□ -1.82
SPTBN1-206ENST00000602898 SPTBN5Q9NRC6 3674 aaKnown RBP3.69□□□□□ -1.82
SPTBN1-206ENST00000602898 IGKV1-12A0A0C4DH73 117 aa3.69□□□□□ -1.82
SPTBN1-206ENST00000602898 PSPHP1O15172 72 aa3.69□□□□□ -1.82
SPTBN1-206ENST00000602898 IGKV1D-12P01611 117 aa3.69□□□□□ -1.82
SPTBN1-206ENST00000602898 CD24P25063 80 aa3.69□□□□□ -1.82
SPTBN1-206ENST00000602898 CRIP2P52943 208 aaPredicted RBP3.69□□□□□ -1.82
SPTBN1-206ENST00000602898 Q6ZSN1 163 aa3.69□□□□□ -1.82
SPTBN1-206ENST00000602898 CD177Q8N6Q3 437 aa3.69□□□□□ -1.82
SPTBN1-206ENST00000602898 IFI27P40305 119 aaPredicted RBP3.69□□□□□ -1.82
SPTBN1-206ENST00000602898 ORMDL2Q53FV1 153 aa3.69□□□□□ -1.82
SPTBN1-206ENST00000602898 C2orf82Q6UX34 121 aa3.69□□□□□ -1.82
SPTBN1-206ENST00000602898 IGFL3Q6UXB1 125 aa3.69□□□□□ -1.82
SPTBN1-206ENST00000602898 ABCA7Q8IZY2 2146 aa3.69□□□□□ -1.82
SPTBN1-206ENST00000602898 SND1-IT1Q9HBX3 110 aa3.69□□□□□ -1.82
SPTBN1-206ENST00000602898 DYNLRB1Q9NP97 96 aa3.69□□□□□ -1.82
SPTBN1-206ENST00000602898 ZNF492Q9P255 531 aa3.69□□□□□ -1.82
SPTBN1-206ENST00000602898 XIRP2A4UGR9 3374 aa3.69□□□□□ -1.82
SPTBN1-206ENST00000602898 MED13Q9UHV7 2174 aa3.68□□□□□ -1.82
SPTBN1-206ENST00000602898 LINC01546A6NGU7 62 aa3.68□□□□□ -1.82
SPTBN1-206ENST00000602898 H0YGG7 62 aa3.68□□□□□ -1.82
SPTBN1-206ENST00000602898 UBE2L6O14933 153 aa3.68□□□□□ -1.82
SPTBN1-206ENST00000602898 ZNF22P17026 224 aaPredicted RBP3.68□□□□□ -1.82
SPTBN1-206ENST00000602898 FHL2Q14192 279 aa3.68□□□□□ -1.82
SPTBN1-206ENST00000602898 SFTA2Q6UW10 78 aa3.68□□□□□ -1.82
SPTBN1-206ENST00000602898 ZNF497Q6ZNH5 498 aa3.68□□□□□ -1.82
SPTBN1-206ENST00000602898 PRO1854Q9UHT4 67 aa3.68□□□□□ -1.82
SPTBN1-206ENST00000602898 CELA1Q9UNI1 258 aa3.68□□□□□ -1.82
SPTBN1-206ENST00000602898 U3KQK5 164 aa3.68□□□□□ -1.82
SPTBN1-206ENST00000602898 EYSQ5T1H1 3165 aa3.68□□□□□ -1.82
SPTBN1-206ENST00000602898 MYOFQ9NZM1 2061 aa3.68□□□□□ -1.82
SPTBN1-206ENST00000602898 IGHV3OR16-12A0A075B7B8 117 aa3.68□□□□□ -1.82
SPTBN1-206ENST00000602898 IGLV5-45A0A087WSX0 123 aa3.68□□□□□ -1.82
SPTBN1-206ENST00000602898 TRBV7-1A0A0A6YYK4 115 aa3.68□□□□□ -1.82
SPTBN1-206ENST00000602898 IGHV4-61A0A0C4DH41 118 aa3.68□□□□□ -1.82
SPTBN1-206ENST00000602898 IGKV1-6A0A0C4DH72 117 aa3.68□□□□□ -1.82
SPTBN1-206ENST00000602898 IGHV4-59P01825 116 aa3.68□□□□□ -1.82
SPTBN1-206ENST00000602898 CLPSP04118 112 aa3.68□□□□□ -1.82
SPTBN1-206ENST00000602898 ZNF137PP52743 207 aa3.68□□□□□ -1.82
SPTBN1-206ENST00000602898 MIC13Q5XKP0 118 aa3.68□□□□□ -1.82
SPTBN1-206ENST00000602898 GPHB5Q86YW7 130 aa3.68□□□□□ -1.82
SPTBN1-206ENST00000602898 FLVCR1-AS1Q8TAF5 88 aa3.68□□□□□ -1.82
SPTBN1-206ENST00000602898 PRUNE2Q8WUY3 3088 aa3.68□□□□□ -1.82
SPTBN1-206ENST00000602898 PKD1L2Q7Z442 2459 aa3.68□□□□□ -1.82
SPTBN1-206ENST00000602898 ADAMTS9Q9P2N4 1935 aa3.68□□□□□ -1.82
SPTBN1-206ENST00000602898 A0A0B4J2C4 111 aa3.67□□□□□ -1.82
SPTBN1-206ENST00000602898 PLNP26678 52 aa3.67□□□□□ -1.82
SPTBN1-206ENST00000602898 ATP5EP56381 51 aaPredicted RBP3.67□□□□□ -1.82
SPTBN1-206ENST00000602898 BSPH1Q075Z2 132 aa3.67□□□□□ -1.82
SPTBN1-206ENST00000602898 DAZAP2Q15038 168 aaPredicted RBP3.67□□□□□ -1.82
SPTBN1-206ENST00000602898 Q8N8P6 123 aa3.67□□□□□ -1.82
SPTBN1-206ENST00000602898 SMCR5Q8TEV8 140 aa3.67□□□□□ -1.82
SPTBN1-206ENST00000602898 VSIG2Q96IQ7 327 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms