RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 LYZL1Q6UWQ5 148 aa7.37□□□□□ -1.23
UPF1-213ENST00000601981 ZNF575Q86XF7 245 aa7.37□□□□□ -1.23
UPF1-213ENST00000601981 CNFNQ9BYD5 112 aa7.37□□□□□ -1.23
UPF1-213ENST00000601981 SPRY2O43597 315 aa7.36□□□□□ -1.23
UPF1-213ENST00000601981 Q0VG73 95 aa7.36□□□□□ -1.23
UPF1-213ENST00000601981 ZNF493Q6ZR52 646 aa7.36□□□□□ -1.23
UPF1-213ENST00000601981 HIST3H2BBQ8N257 126 aa7.36□□□□□ -1.23
UPF1-213ENST00000601981 TPPP3Q9BW30 176 aa7.36□□□□□ -1.23
UPF1-213ENST00000601981 C7orf71A4D174 169 aa7.35□□□□□ -1.23
UPF1-213ENST00000601981 GRIFINA4D1Z8 144 aa7.35□□□□□ -1.23
UPF1-213ENST00000601981 SNAI2O43623 268 aa7.35□□□□□ -1.23
UPF1-213ENST00000601981 INSP01308 110 aa7.35□□□□□ -1.23
UPF1-213ENST00000601981 OR5AL1P0C617 328 aa7.35□□□□□ -1.23
UPF1-213ENST00000601981 MED14OSP0DP75 135 aa7.35□□□□□ -1.23
UPF1-213ENST00000601981 RNASE4P34096 147 aaKnown RBP7.35□□□□□ -1.23
UPF1-213ENST00000601981 CDKN1BP46527 198 aa7.35□□□□□ -1.23
UPF1-213ENST00000601981 OR10J3Q5JRS4 329 aa7.35□□□□□ -1.23
UPF1-213ENST00000601981 AMTNQ6UX39 209 aa7.35□□□□□ -1.23
UPF1-213ENST00000601981 RNF183Q96D59 192 aa7.35□□□□□ -1.23
UPF1-213ENST00000601981 SSBP4Q9BWG4 385 aaPredicted RBP7.35□□□□□ -1.23
UPF1-213ENST00000601981 XCL2Q9UBD3 114 aa7.35□□□□□ -1.23
UPF1-213ENST00000601981 GOLT1BQ9Y3E0 138 aa7.35□□□□□ -1.23
UPF1-213ENST00000601981 U3KQK5 164 aa7.35□□□□□ -1.23
UPF1-213ENST00000601981 J3KRW8 73 aa7.34□□□□□ -1.23
UPF1-213ENST00000601981 SRIP30626 198 aa7.34□□□□□ -1.23
UPF1-213ENST00000601981 FXYD7P58549 80 aa7.34□□□□□ -1.23
UPF1-213ENST00000601981 SPINK13Q1W4C9 94 aa7.34□□□□□ -1.23
UPF1-213ENST00000601981 KIAA1644Q3SXP7 199 aa7.34□□□□□ -1.23
UPF1-213ENST00000601981 DNLZQ5SXM8 178 aa7.34□□□□□ -1.23
UPF1-213ENST00000601981 TMEM208Q9BTX3 173 aa7.34□□□□□ -1.23
UPF1-213ENST00000601981 IGHV4-4A0A075B6R2 117 aa7.33□□□□□ -1.24
UPF1-213ENST00000601981 IFITM10A6NMD0 228 aa7.33□□□□□ -1.24
UPF1-213ENST00000601981 M0R2Z0 102 aa7.33□□□□□ -1.24
UPF1-213ENST00000601981 ESDP10768 282 aa7.33□□□□□ -1.24
UPF1-213ENST00000601981 S100A2P29034 98 aa7.33□□□□□ -1.24
UPF1-213ENST00000601981 ASIPP42127 132 aa7.33□□□□□ -1.24
UPF1-213ENST00000601981 AKR1D1P51857 326 aa7.33□□□□□ -1.24
UPF1-213ENST00000601981 CACNG7P62955 275 aa7.33□□□□□ -1.24
UPF1-213ENST00000601981 KIR3DS1Q14943 382 aa7.33□□□□□ -1.24
UPF1-213ENST00000601981 ANXA2RQ3ZCQ2 193 aa7.33□□□□□ -1.24
UPF1-213ENST00000601981 GFI1BQ5VTD9 330 aa7.33□□□□□ -1.24
UPF1-213ENST00000601981 DMRTA1Q5VZB9 504 aa7.33□□□□□ -1.24
UPF1-213ENST00000601981 Q6ZQT7 251 aa7.33□□□□□ -1.24
UPF1-213ENST00000601981 TMEM256Q8N2U0 113 aa7.33□□□□□ -1.24
UPF1-213ENST00000601981 OR11H2Q8NH07 326 aa7.33□□□□□ -1.24
UPF1-213ENST00000601981 KCNS1Q96KK3 526 aa7.33□□□□□ -1.24
UPF1-213ENST00000601981 C20orf144Q9BQM9 153 aa7.33□□□□□ -1.24
UPF1-213ENST00000601981 OVOL2Q9BRP0 275 aa7.33□□□□□ -1.24
UPF1-213ENST00000601981 ALKBH7Q9BT30 221 aaPredicted RBP7.33□□□□□ -1.24
UPF1-213ENST00000601981 RETNQ9HD89 108 aa7.33□□□□□ -1.24
UPF1-213ENST00000601981 NAGKQ9UJ70 344 aa7.33□□□□□ -1.24
UPF1-213ENST00000601981 NBEAL2Q6ZNJ1 2754 aa7.32□□□□□ -1.24
UPF1-213ENST00000601981 ZNF324O75467 553 aaPredicted RBP7.32□□□□□ -1.24
UPF1-213ENST00000601981 MIFP14174 115 aa7.32□□□□□ -1.24
UPF1-213ENST00000601981 NTF3P20783 257 aa7.32□□□□□ -1.24
UPF1-213ENST00000601981 TWIST1Q15672 202 aa7.32□□□□□ -1.24
UPF1-213ENST00000601981 TDRG1Q3Y452 100 aa7.32□□□□□ -1.24
UPF1-213ENST00000601981 FAM104BQ5XKR9 115 aa7.32□□□□□ -1.24
UPF1-213ENST00000601981 FAM159AQ6UWV7 190 aa7.32□□□□□ -1.24
UPF1-213ENST00000601981 BAGE3Q86Y29 109 aa7.32□□□□□ -1.24
UPF1-213ENST00000601981 TMEM191AQ9H0A3 160 aa7.32□□□□□ -1.24
UPF1-213ENST00000601981 SCRT2Q9NQ03 307 aa7.32□□□□□ -1.24
UPF1-213ENST00000601981 TP53TG3Q9ULZ0 132 aa7.32□□□□□ -1.24
UPF1-213ENST00000601981 RYR3Q15413 4870 aa7.32□□□□□ -1.24
UPF1-213ENST00000601981 COL7A1Q02388 2944 aa7.31□□□□□ -1.24
UPF1-213ENST00000601981 DNAH9Q9NYC9 4486 aa7.31□□□□□ -1.24
UPF1-213ENST00000601981 IGHV3OR16-12A0A075B7B8 117 aa7.31□□□□□ -1.24
UPF1-213ENST00000601981 TRAV12-3A0A0B4J271 114 aa7.31□□□□□ -1.24
UPF1-213ENST00000601981 SMIM9A6NGZ8 99 aa7.31□□□□□ -1.24
UPF1-213ENST00000601981 H3BVH4 76 aa7.31□□□□□ -1.24
UPF1-213ENST00000601981 GIG44P09565 113 aaPredicted RBP7.31□□□□□ -1.24
UPF1-213ENST00000601981 S100A4P26447 101 aaKnown RBP7.31□□□□□ -1.24
UPF1-213ENST00000601981 LINC00310P59036 64 aa7.31□□□□□ -1.24
UPF1-213ENST00000601981 PDZD11Q5EBL8 140 aa7.31□□□□□ -1.24
UPF1-213ENST00000601981 MUC21Q5SSG8 566 aa7.31□□□□□ -1.24
UPF1-213ENST00000601981 CSNK1G2-AS1Q8NCQ2 148 aa7.31□□□□□ -1.24
UPF1-213ENST00000601981 OR10AG1Q8NH19 301 aa7.31□□□□□ -1.24
UPF1-213ENST00000601981 C18orf32Q8TCD1 76 aa7.31□□□□□ -1.24
UPF1-213ENST00000601981 HIST1H2BLQ99880 126 aa7.31□□□□□ -1.24
UPF1-213ENST00000601981 TRAV12-2A0A075B6T6 113 aa7.3□□□□□ -1.24
UPF1-213ENST00000601981 IGHV1OR15-1A0A075B7D0 117 aa7.3□□□□□ -1.24
UPF1-213ENST00000601981 MUC21A0A0G2JKD1 596 aa7.3□□□□□ -1.24
UPF1-213ENST00000601981 MUC21A0A140T8X8 626 aa7.3□□□□□ -1.24
UPF1-213ENST00000601981 SERF1AO75920 110 aa7.3□□□□□ -1.24
UPF1-213ENST00000601981 NXPH4O95158 308 aa7.3□□□□□ -1.24
UPF1-213ENST00000601981 ZNF705AQ6ZN79 300 aaPredicted RBP7.3□□□□□ -1.24
UPF1-213ENST00000601981 SMIM15Q7Z3B0 74 aa7.3□□□□□ -1.24
UPF1-213ENST00000601981 TMEM18Q96B42 140 aa7.3□□□□□ -1.24
UPF1-213ENST00000601981 CRXO43186 299 aaPredicted RBP7.29□□□□□ -1.24
UPF1-213ENST00000601981 SMIM6P0DI80 62 aa7.29□□□□□ -1.24
UPF1-213ENST00000601981 RNASE3P12724 160 aaKnown RBP7.29□□□□□ -1.24
UPF1-213ENST00000601981 FABP4P15090 132 aa7.29□□□□□ -1.24
UPF1-213ENST00000601981 RRN3P1Q2M238 152 aa7.29□□□□□ -1.24
UPF1-213ENST00000601981 MRPL51Q4U2R6 128 aaKnown RBP7.29□□□□□ -1.24
UPF1-213ENST00000601981 SPANXN1Q5VSR9 72 aa7.29□□□□□ -1.24
UPF1-213ENST00000601981 AMN1Q8IY45 258 aa7.29□□□□□ -1.24
UPF1-213ENST00000601981 IL17DQ8TAD2 202 aa7.29□□□□□ -1.24
UPF1-213ENST00000601981 PACRGQ96M98 296 aaPredicted RBP7.29□□□□□ -1.24
UPF1-213ENST00000601981 LINC01587Q99440 93 aa7.29□□□□□ -1.24
UPF1-213ENST00000601981 C11orf68Q9H3H3 251 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms