RNA–Protein interactions for RNA: ENST00000601324.1

VRK3-222, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-222ENST00000601324 CXCL5P42830 114 aa2.52□□□□□ -2.01
VRK3-222ENST00000601324 CBX5P45973 191 aa2.52□□□□□ -2.01
VRK3-222ENST00000601324 PLP1P60201 277 aa2.52□□□□□ -2.01
VRK3-222ENST00000601324 TMEM183BQ1AE95 376 aa2.52□□□□□ -2.01
VRK3-222ENST00000601324 PRR9Q5T870 116 aa2.52□□□□□ -2.01
VRK3-222ENST00000601324 KRTAP26-1Q6PEX3 210 aa2.52□□□□□ -2.01
VRK3-222ENST00000601324 DPPA3Q6W0C5 159 aa2.52□□□□□ -2.01
VRK3-222ENST00000601324 LHFPL1Q86WI0 220 aa2.52□□□□□ -2.01
VRK3-222ENST00000601324 TMEM183AQ8IXX5 376 aa2.52□□□□□ -2.01
VRK3-222ENST00000601324 ZFAND2AQ8N6M9 145 aa2.52□□□□□ -2.01
VRK3-222ENST00000601324 SPACA4Q8TDM5 124 aa2.52□□□□□ -2.01
VRK3-222ENST00000601324 CCDC90BQ9GZT6 254 aa2.52□□□□□ -2.01
VRK3-222ENST00000601324 SLC25A31Q9H0C2 315 aa2.52□□□□□ -2.01
VRK3-222ENST00000601324 VCXQ9H320 206 aa2.52□□□□□ -2.01
VRK3-222ENST00000601324 DUSP21Q9H596 190 aa2.52□□□□□ -2.01
VRK3-222ENST00000601324 FCGBPQ9Y6R7 5405 aaPredicted RBP2.51□□□□□ -2.01
VRK3-222ENST00000601324 TRAV8-1A0A0A6YYK1 113 aa2.51□□□□□ -2.01
VRK3-222ENST00000601324 TRAV8-6A0A0B4J262 113 aa2.51□□□□□ -2.01
VRK3-222ENST00000601324 TRAV4A0A0B4J268 109 aa2.51□□□□□ -2.01
VRK3-222ENST00000601324 TRGV4A0A0C4DH28 118 aa2.51□□□□□ -2.01
VRK3-222ENST00000601324 C7orf71A4D174 169 aa2.51□□□□□ -2.01
VRK3-222ENST00000601324 ANKRD65E5RJM6 399 aa2.51□□□□□ -2.01
VRK3-222ENST00000601324 SLC17A3O00476 420 aa2.51□□□□□ -2.01
VRK3-222ENST00000601324 CDS2O95674 445 aa2.51□□□□□ -2.01
VRK3-222ENST00000601324 CFDP00746 253 aaPredicted RBP2.51□□□□□ -2.01
VRK3-222ENST00000601324 SLC25A5P05141 298 aaKnown RBP2.51□□□□□ -2.01
VRK3-222ENST00000601324 CXCL2P19875 107 aa2.51□□□□□ -2.01
VRK3-222ENST00000601324 BTN1A1Q13410 526 aa2.51□□□□□ -2.01
VRK3-222ENST00000601324 IDNKQ5T6J7 187 aa2.51□□□□□ -2.01
VRK3-222ENST00000601324 LPCAT3Q6P1A2 487 aa2.51□□□□□ -2.01
VRK3-222ENST00000601324 ZFP1Q6P2D0 407 aa2.51□□□□□ -2.01
VRK3-222ENST00000601324 PATE2Q6UY27 113 aa2.51□□□□□ -2.01
VRK3-222ENST00000601324 ZFP2Q6ZN57 461 aa2.51□□□□□ -2.01
VRK3-222ENST00000601324 ZNF555Q8NEP9 628 aa2.51□□□□□ -2.01
VRK3-222ENST00000601324 OR10P1Q8NGE3 313 aa2.51□□□□□ -2.01
VRK3-222ENST00000601324 GLYATL2Q8WU03 294 aa2.51□□□□□ -2.01
VRK3-222ENST00000601324 MGLLQ99685 303 aa2.51□□□□□ -2.01
VRK3-222ENST00000601324 ENY2Q9NPA8 101 aa2.51□□□□□ -2.01
VRK3-222ENST00000601324 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.51□□□□□ -2.01
VRK3-222ENST00000601324 PAIP2BQ9ULR5 123 aaKnown RBP2.51□□□□□ -2.01
VRK3-222ENST00000601324 TMEM56-RWDD3S4R434 201 aa2.51□□□□□ -2.01
VRK3-222ENST00000601324 MUC21A0A0G2JKD1 596 aa2.5□□□□□ -2.01
VRK3-222ENST00000601324 C3orf85A0A1B0GTC6 90 aa2.5□□□□□ -2.01
VRK3-222ENST00000601324 RPL7P18124 248 aaKnown RBP2.5□□□□□ -2.01
VRK3-222ENST00000601324 AKR1C2P52895 323 aa2.5□□□□□ -2.01
VRK3-222ENST00000601324 ATP5IP56385 69 aaPredicted RBP2.5□□□□□ -2.01
VRK3-222ENST00000601324 CNBPP62633 177 aaKnown RBP2.5□□□□□ -2.01
VRK3-222ENST00000601324 RPL19P84098 196 aaKnown RBP2.5□□□□□ -2.01
VRK3-222ENST00000601324 SP6Q3SY56 376 aa2.5□□□□□ -2.01
VRK3-222ENST00000601324 OR10J3Q5JRS4 329 aa2.5□□□□□ -2.01
VRK3-222ENST00000601324 C22orf42Q6IC83 251 aa2.5□□□□□ -2.01
VRK3-222ENST00000601324 PCP2Q8IVA1 136 aa2.5□□□□□ -2.01
VRK3-222ENST00000601324 SELENOHQ8IZQ5 122 aaKnown RBP2.5□□□□□ -2.01
VRK3-222ENST00000601324 SLC25A29Q8N8R3 303 aa2.5□□□□□ -2.01
VRK3-222ENST00000601324 OR5H2Q8NGV7 314 aa2.5□□□□□ -2.01
VRK3-222ENST00000601324 PDCD10Q9BUL8 212 aa2.5□□□□□ -2.01
VRK3-222ENST00000601324 AGPAT4-IT1Q9H0P7 198 aa2.5□□□□□ -2.01
VRK3-222ENST00000601324 GTSF1LQ9H1H1 148 aa2.5□□□□□ -2.01
VRK3-222ENST00000601324 DPH3P1Q9H4G8 78 aa2.5□□□□□ -2.01
VRK3-222ENST00000601324 DIABLOQ9NR28 239 aa2.5□□□□□ -2.01
VRK3-222ENST00000601324 NDUFB11Q9NX14 153 aa2.5□□□□□ -2.01
VRK3-222ENST00000601324 RABL2BQ9UNT1 228 aa2.5□□□□□ -2.01
VRK3-222ENST00000601324 U3KQ87 197 aa2.5□□□□□ -2.01
VRK3-222ENST00000601324 IGKV2D-24A0A075B6R9 120 aa2.49□□□□□ -2.01
VRK3-222ENST00000601324 CEBPZOSA8MTT3 80 aa2.49□□□□□ -2.01
VRK3-222ENST00000601324 H3BQ15 152 aa2.49□□□□□ -2.01
VRK3-222ENST00000601324 MPDU1O75352 247 aa2.49□□□□□ -2.01
VRK3-222ENST00000601324 FABP1P07148 127 aa2.49□□□□□ -2.01
VRK3-222ENST00000601324 PFN1P07737 140 aaKnown RBP2.49□□□□□ -2.01
VRK3-222ENST00000601324 NMBP08949 121 aa2.49□□□□□ -2.01
VRK3-222ENST00000601324 IGLC2P0DOY2 106 aa2.49□□□□□ -2.01
VRK3-222ENST00000601324 ORM2P19652 201 aa2.49□□□□□ -2.01
VRK3-222ENST00000601324 MYL9P24844 172 aa2.49□□□□□ -2.01
VRK3-222ENST00000601324 HLA-DMAP28067 261 aa2.49□□□□□ -2.01
VRK3-222ENST00000601324 UBE2AP49459 152 aa2.49□□□□□ -2.01
VRK3-222ENST00000601324 PIGPP57054 158 aa2.49□□□□□ -2.01
VRK3-222ENST00000601324 TAS2R46P59540 309 aa2.49□□□□□ -2.01
VRK3-222ENST00000601324 ERCC8Q13216 396 aa2.49□□□□□ -2.01
VRK3-222ENST00000601324 KRTAP19-2Q3LHN2 52 aa2.49□□□□□ -2.01
VRK3-222ENST00000601324 LCE3AQ5TA76 89 aa2.49□□□□□ -2.01
VRK3-222ENST00000601324 GPR107Q5VW38 600 aa2.49□□□□□ -2.01
VRK3-222ENST00000601324 ENHOQ6UWT2 76 aa2.49□□□□□ -2.01
VRK3-222ENST00000601324 NIT1Q86X76 327 aa2.49□□□□□ -2.01
VRK3-222ENST00000601324 C8orf59Q8N0T1 100 aaPredicted RBP2.49□□□□□ -2.01
VRK3-222ENST00000601324 LGI3Q8N145 548 aa2.49□□□□□ -2.01
VRK3-222ENST00000601324 OR1S1Q8NH92 325 aa2.49□□□□□ -2.01
VRK3-222ENST00000601324 GPX8Q8TED1 209 aa2.49□□□□□ -2.01
VRK3-222ENST00000601324 TMEM147Q9BVK8 224 aa2.49□□□□□ -2.01
VRK3-222ENST00000601324 KRTAP4-1Q9BYQ7 146 aa2.49□□□□□ -2.01
VRK3-222ENST00000601324 TMEM222Q9H0R3 208 aa2.49□□□□□ -2.01
VRK3-222ENST00000601324 VCX3BQ9H321 246 aa2.49□□□□□ -2.01
VRK3-222ENST00000601324 VCX3AQ9NNX9 186 aa2.49□□□□□ -2.01
VRK3-222ENST00000601324 RABL2AQ9UBK7 228 aaPredicted RBP2.49□□□□□ -2.01
VRK3-222ENST00000601324 TRBV6-4A0A1B0GX49 114 aa2.48□□□□□ -2.01
VRK3-222ENST00000601324 GGTLC3B5MD39 225 aa2.48□□□□□ -2.01
VRK3-222ENST00000601324 H7C1H1 209 aa2.48□□□□□ -2.01
VRK3-222ENST00000601324 K7EPK0 472 aa2.48□□□□□ -2.01
VRK3-222ENST00000601324 PFDN1O60925 122 aa2.48□□□□□ -2.01
VRK3-222ENST00000601324 PITX3O75364 302 aa2.48□□□□□ -2.01
VRK3-222ENST00000601324 ATG12O94817 140 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms