RNA–Protein interactions for RNA: ENST00000600387.5

ARHGEF1-221, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 2,272 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-221ENST00000600387 SBSPONQ8IVN8 264 aa14.12□□□□□ -0.15
ARHGEF1-221ENST00000600387 C11orf86A6NJI1 115 aa14.12□□□□□ -0.15
ARHGEF1-221ENST00000600387 DUSP14O95147 198 aaKnown RBP14.12□□□□□ -0.15
ARHGEF1-221ENST00000600387 RPL32P62910 135 aaKnown RBP14.12□□□□□ -0.15
ARHGEF1-221ENST00000600387 GPHB5Q86YW7 130 aa14.12□□□□□ -0.15
ARHGEF1-221ENST00000600387 POM121L12Q8N7R1 296 aa14.12□□□□□ -0.15
ARHGEF1-221ENST00000600387 SIRPDQ9H106 197 aa14.12□□□□□ -0.15
ARHGEF1-221ENST00000600387 IGLV4-69A0A075B6H9 119 aa14.11□□□□□ -0.15
ARHGEF1-221ENST00000600387 FAM90A27PA6NNH2 459 aa14.11□□□□□ -0.15
ARHGEF1-221ENST00000600387 MT-ATP8P03928 68 aa14.11□□□□□ -0.15
ARHGEF1-221ENST00000600387 ANXA2RQ3ZCQ2 193 aa14.11□□□□□ -0.15
ARHGEF1-221ENST00000600387 SFTA2Q6UW10 78 aa14.11□□□□□ -0.15
ARHGEF1-221ENST00000600387 SVIPQ8NHG7 77 aa14.11□□□□□ -0.15
ARHGEF1-221ENST00000600387 CARD19Q96LW7 228 aa14.11□□□□□ -0.15
ARHGEF1-221ENST00000600387 FHL3Q13643 280 aa14.11□□□□□ -0.15
ARHGEF1-221ENST00000600387 CSMD1Q96PZ7 3565 aa14.1□□□□□ -0.15
ARHGEF1-221ENST00000600387 A8MWV9 139 aa14.1□□□□□ -0.15
ARHGEF1-221ENST00000600387 SPRY2O43597 315 aa14.1□□□□□ -0.15
ARHGEF1-221ENST00000600387 TCL1BO95988 128 aa14.1□□□□□ -0.15
ARHGEF1-221ENST00000600387 GRNP28799 593 aaKnown RBP14.1□□□□□ -0.15
ARHGEF1-221ENST00000600387 XGP55808 180 aa14.1□□□□□ -0.15
ARHGEF1-221ENST00000600387 PMVKQ15126 192 aa14.1□□□□□ -0.15
ARHGEF1-221ENST00000600387 PTH2Q96A98 100 aa14.1□□□□□ -0.15
ARHGEF1-221ENST00000600387 ZFP36P26651 326 aaKnown RBP14.1□□□□□ -0.15
ARHGEF1-221ENST00000600387 UBE2E1P51965 193 aa14.1□□□□□ -0.15
ARHGEF1-221ENST00000600387 IGIPA6NJ69 53 aa14.09□□□□□ -0.15
ARHGEF1-221ENST00000600387 TSHBP01222 138 aa14.09□□□□□ -0.15
ARHGEF1-221ENST00000600387 IGHV3-30P01768 117 aa14.09□□□□□ -0.15
ARHGEF1-221ENST00000600387 IGHV3-30-5P0DP03 117 aa14.09□□□□□ -0.15
ARHGEF1-221ENST00000600387 C10orf126Q8N4M7 172 aa14.09□□□□□ -0.15
ARHGEF1-221ENST00000600387 TMEM141Q96I45 108 aa14.09□□□□□ -0.15
ARHGEF1-221ENST00000600387 DMXL1Q9Y485 3027 aa14.09□□□□□ -0.15
ARHGEF1-221ENST00000600387 ABCA4P78363 2273 aa14.08□□□□□ -0.15
ARHGEF1-221ENST00000600387 LINC01548A6NM66 108 aa14.08□□□□□ -0.15
ARHGEF1-221ENST00000600387 CFC1BP0CG36 223 aa14.08□□□□□ -0.15
ARHGEF1-221ENST00000600387 CFC1P0CG37 223 aa14.08□□□□□ -0.15
ARHGEF1-221ENST00000600387 C11orf71Q6IPW1 123 aa14.08□□□□□ -0.15
ARHGEF1-221ENST00000600387 SLC25A29Q8N8R3 303 aa14.08□□□□□ -0.15
ARHGEF1-221ENST00000600387 TP53TG1Q9Y2A0 90 aa14.08□□□□□ -0.15
ARHGEF1-221ENST00000600387 ANKRD11Q6UB99 2663 aaPredicted RBP14.08□□□□□ -0.16
ARHGEF1-221ENST00000600387 IGHV4OR15-8A0A075B7B6 117 aa14.08□□□□□ -0.16
ARHGEF1-221ENST00000600387 A0A087WW49 117 aa14.08□□□□□ -0.16
ARHGEF1-221ENST00000600387 AJUBAQ96IF1 538 aa14.08□□□□□ -0.16
ARHGEF1-221ENST00000600387 NXPH4O95158 308 aa14.07□□□□□ -0.16
ARHGEF1-221ENST00000600387 ZNF688P0C7X2 276 aa14.07□□□□□ -0.16
ARHGEF1-221ENST00000600387 RNASE3P12724 160 aaKnown RBP14.07□□□□□ -0.16
ARHGEF1-221ENST00000600387 Q5PR19 223 aa14.07□□□□□ -0.16
ARHGEF1-221ENST00000600387 FAM19A4Q96LR4 140 aa14.07□□□□□ -0.16
ARHGEF1-221ENST00000600387 APRG1Q8IVJ8 170 aa14.07□□□□□ -0.16
ARHGEF1-221ENST00000600387 TIMM17AQ99595 171 aa14.07□□□□□ -0.16
ARHGEF1-221ENST00000600387 ANKHD1Q8IWZ3 2542 aaKnown RBP14.06□□□□□ -0.16
ARHGEF1-221ENST00000600387 DCHS2Q6V1P9 2916 aa14.06□□□□□ -0.16
ARHGEF1-221ENST00000600387 TRBV7-9A0A0J9YWB2 115 aa14.06□□□□□ -0.16
ARHGEF1-221ENST00000600387 FAM223BA6NKX1 122 aa14.06□□□□□ -0.16
ARHGEF1-221ENST00000600387 TMEM262E9PQX1 116 aa14.06□□□□□ -0.16
ARHGEF1-221ENST00000600387 SOCS3O14543 225 aa14.06□□□□□ -0.16
ARHGEF1-221ENST00000600387 RNASE4P34096 147 aaKnown RBP14.06□□□□□ -0.16
ARHGEF1-221ENST00000600387 FAM223AQ8IWN6 122 aa14.06□□□□□ -0.16
ARHGEF1-221ENST00000600387 PRO1854Q9UHT4 67 aa14.06□□□□□ -0.16
ARHGEF1-221ENST00000600387 ATMQ13315 3056 aa14.06□□□□□ -0.16
ARHGEF1-221ENST00000600387 GNRH2O43555 120 aa14.06□□□□□ -0.16
ARHGEF1-221ENST00000600387 SCGB1C2P0DMR2 95 aa14.05□□□□□ -0.16
ARHGEF1-221ENST00000600387 POLR2KP53803 58 aaKnown RBP14.05□□□□□ -0.16
ARHGEF1-221ENST00000600387 WFDC12Q8WWY7 111 aa14.05□□□□□ -0.16
ARHGEF1-221ENST00000600387 KIF25-AS1Q9Y6Z4 181 aa14.05□□□□□ -0.16
ARHGEF1-221ENST00000600387 LRBAP50851 2863 aa14.05□□□□□ -0.16
ARHGEF1-221ENST00000600387 MUC4Q99102 2169 aa14.04□□□□□ -0.16
ARHGEF1-221ENST00000600387 SAA4P35542 130 aa14.04□□□□□ -0.16
ARHGEF1-221ENST00000600387 ARL3P36405 182 aa14.04□□□□□ -0.16
ARHGEF1-221ENST00000600387 Q6ZS46 218 aa14.04□□□□□ -0.16
ARHGEF1-221ENST00000600387 KIR2DL4Q99706 377 aa14.04□□□□□ -0.16
ARHGEF1-221ENST00000600387 M0QXV9 152 aa14.04□□□□□ -0.16
ARHGEF1-221ENST00000600387 VCYO14598 125 aa14.04□□□□□ -0.16
ARHGEF1-221ENST00000600387 EMP1P54849 157 aa14.04□□□□□ -0.16
ARHGEF1-221ENST00000600387 LINC00315P59091 139 aa14.04□□□□□ -0.16
ARHGEF1-221ENST00000600387 TMEM170BQ5T4T1 132 aa14.04□□□□□ -0.16
ARHGEF1-221ENST00000600387 ANKRD29Q8N6D5 301 aa14.04□□□□□ -0.16
ARHGEF1-221ENST00000600387 C5orf56Q8N8D9 126 aa14.04□□□□□ -0.16
ARHGEF1-221ENST00000600387 ERG28Q9UKR5 140 aa14.04□□□□□ -0.16
ARHGEF1-221ENST00000600387 TSPEAR-AS2P59090 65 aa14.03□□□□□ -0.16
ARHGEF1-221ENST00000600387 AKAP13Q12802 2813 aa14.03□□□□□ -0.16
ARHGEF1-221ENST00000600387 TRAV41A0A0B4J266 112 aa14.02□□□□□ -0.16
ARHGEF1-221ENST00000600387 NDUFA4O00483 81 aa14.02□□□□□ -0.16
ARHGEF1-221ENST00000600387 ZNF876PQ49A33 203 aa14.02□□□□□ -0.16
ARHGEF1-221ENST00000600387 J3QQQ9 107 aa14.02□□□□□ -0.17
ARHGEF1-221ENST00000600387 LGALS3P17931 250 aaKnown RBP14.02□□□□□ -0.17
ARHGEF1-221ENST00000600387 RPL39P62891 51 aaKnown RBP14.01□□□□□ -0.17
ARHGEF1-221ENST00000600387 AMELXQ99217 191 aa14.01□□□□□ -0.17
ARHGEF1-221ENST00000600387 SUMO4Q6EEV6 95 aa14.01□□□□□ -0.17
ARHGEF1-221ENST00000600387 ZNRF2Q8NHG8 242 aa14.01□□□□□ -0.17
ARHGEF1-221ENST00000600387 C19orf54Q5BKX5 351 aa14□□□□□ -0.17
ARHGEF1-221ENST00000600387 UNQ9165/PRO28630Q6UXU0 137 aa14□□□□□ -0.17
ARHGEF1-221ENST00000600387 SLC25A20O43772 301 aa13.99□□□□□ -0.17
ARHGEF1-221ENST00000600387 DEFB1P60022 68 aa13.99□□□□□ -0.17
ARHGEF1-221ENST00000600387 CRIP2P52943 208 aaPredicted RBP13.99□□□□□ -0.17
ARHGEF1-221ENST00000600387 ZFAND6Q6FIF0 208 aa13.99□□□□□ -0.17
ARHGEF1-221ENST00000600387 TRBV27A0A0K0K1C4 114 aa13.98□□□□□ -0.17
ARHGEF1-221ENST00000600387 CACNA1BQ00975 2339 aa13.98□□□□□ -0.17
ARHGEF1-221ENST00000600387 SDHAF1A6NFY7 115 aa13.98□□□□□ -0.17
ARHGEF1-221ENST00000600387 F6UB75 175 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms