RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 ESDP10768 282 aa11.21□□□□□ -0.62
HIF3A-218ENST00000600383 CKS2P33552 79 aa11.21□□□□□ -0.62
HIF3A-218ENST00000600383 AMTP48728 403 aa11.21□□□□□ -0.62
HIF3A-218ENST00000600383 DEFA6Q01524 100 aa11.21□□□□□ -0.62
HIF3A-218ENST00000600383 ODF3L2Q3SX64 289 aa11.21□□□□□ -0.62
HIF3A-218ENST00000600383 CDPF1Q6NVV7 123 aa11.21□□□□□ -0.62
HIF3A-218ENST00000600383 SMIM15Q7Z3B0 74 aa11.21□□□□□ -0.62
HIF3A-218ENST00000600383 OR11H12B2RN74 326 aa11.2□□□□□ -0.62
HIF3A-218ENST00000600383 RNASE3P12724 160 aaKnown RBP11.2□□□□□ -0.62
HIF3A-218ENST00000600383 RBMY1BA6NDE4 496 aaKnown RBP11.2□□□□□ -0.62
HIF3A-218ENST00000600383 RBMY1EA6NEQ0 496 aaKnown RBP11.2□□□□□ -0.62
HIF3A-218ENST00000600383 HSBP1O75506 76 aa11.2□□□□□ -0.62
HIF3A-218ENST00000600383 NCR2O95944 276 aa11.2□□□□□ -0.62
HIF3A-218ENST00000600383 RBMY1DP0C7P1 496 aaKnown RBP11.2□□□□□ -0.62
HIF3A-218ENST00000600383 RAB4AP20338 218 aa11.2□□□□□ -0.62
HIF3A-218ENST00000600383 CACNG7P62955 275 aa11.2□□□□□ -0.62
HIF3A-218ENST00000600383 ORMDL3Q8N138 153 aa11.2□□□□□ -0.62
HIF3A-218ENST00000600383 NOTCH3Q9UM47 2321 aa11.19□□□□□ -0.62
HIF3A-218ENST00000600383 LOC389332A0A1B0GUA5 103 aa11.19□□□□□ -0.62
HIF3A-218ENST00000600383 IGLV1-51P01701 117 aa11.19□□□□□ -0.62
HIF3A-218ENST00000600383 PRELID3AQ96N28 172 aa11.19□□□□□ -0.62
HIF3A-218ENST00000600383 DMRTA1Q5VZB9 504 aa11.18□□□□□ -0.62
HIF3A-218ENST00000600383 STHQ8IWL8 128 aa11.18□□□□□ -0.62
HIF3A-218ENST00000600383 Q8N1Y9 231 aa11.18□□□□□ -0.62
HIF3A-218ENST00000600383 RNF185Q96GF1 192 aa11.18□□□□□ -0.62
HIF3A-218ENST00000600383 URB1-AS1Q96HZ7 61 aa11.18□□□□□ -0.62
HIF3A-218ENST00000600383 IGHV4-4A0A075B6R2 117 aa11.18□□□□□ -0.62
HIF3A-218ENST00000600383 IGHV1OR15-1A0A075B7D0 117 aa11.18□□□□□ -0.62
HIF3A-218ENST00000600383 CRXO43186 299 aaPredicted RBP11.18□□□□□ -0.62
HIF3A-218ENST00000600383 LINC00614P0C842 121 aa11.18□□□□□ -0.62
HIF3A-218ENST00000600383 PMCHL1Q16048 86 aa11.18□□□□□ -0.62
HIF3A-218ENST00000600383 C14orf144Q96I85 54 aa11.18□□□□□ -0.62
HIF3A-218ENST00000600383 MDFICQ9P1T7 246 aa11.18□□□□□ -0.62
HIF3A-218ENST00000600383 GAS8-AS1O95177 125 aa11.17□□□□□ -0.62
HIF3A-218ENST00000600383 RBMY1A1P0DJD3 496 aaKnown RBP11.17□□□□□ -0.62
HIF3A-218ENST00000600383 RBMY1CP0DJD4 496 aa11.17□□□□□ -0.62
HIF3A-218ENST00000600383 RBMY1FQ15415 496 aaKnown RBP11.17□□□□□ -0.62
HIF3A-218ENST00000600383 TDRG1Q3Y452 100 aa11.17□□□□□ -0.62
HIF3A-218ENST00000600383 LINC00482Q8N8I6 264 aa11.17□□□□□ -0.62
HIF3A-218ENST00000600383 PRSS3P2Q8NHM4 247 aa11.17□□□□□ -0.62
HIF3A-218ENST00000600383 C14orf178Q8N769 122 aaPredicted RBP11.17□□□□□ -0.62
HIF3A-218ENST00000600383 SCRT2Q9NQ03 307 aa11.17□□□□□ -0.62
HIF3A-218ENST00000600383 CBY3A6NI87 242 aa11.16□□□□□ -0.62
HIF3A-218ENST00000600383 PRM2P04554 102 aa11.16□□□□□ -0.62
HIF3A-218ENST00000600383 PKIAP61925 76 aa11.16□□□□□ -0.62
HIF3A-218ENST00000600383 U3KQK5 164 aa11.16□□□□□ -0.62
HIF3A-218ENST00000600383 MUC4Q99102 2169 aa11.16□□□□□ -0.62
HIF3A-218ENST00000600383 TRAV26-2A0A0B4J265 109 aa11.15□□□□□ -0.62
HIF3A-218ENST00000600383 NPYP01303 97 aa11.15□□□□□ -0.62
HIF3A-218ENST00000600383 MED14OSP0DP75 135 aa11.15□□□□□ -0.62
HIF3A-218ENST00000600383 GATA1P15976 413 aaPredicted RBP11.15□□□□□ -0.62
HIF3A-218ENST00000600383 Q6ZWC4 215 aa11.15□□□□□ -0.62
HIF3A-218ENST00000600383 XCL2Q9UBD3 114 aa11.15□□□□□ -0.62
HIF3A-218ENST00000600383 VWFP04275 2813 aa11.15□□□□□ -0.62
HIF3A-218ENST00000600383 IGHV3-16A0A0C4DH30 117 aa11.15□□□□□ -0.62
HIF3A-218ENST00000600383 A8MTW9 85 aa11.15□□□□□ -0.62
HIF3A-218ENST00000600383 SCGB1D1O95968 90 aa11.15□□□□□ -0.62
HIF3A-218ENST00000600383 IFI27P40305 119 aaPredicted RBP11.15□□□□□ -0.62
HIF3A-218ENST00000600383 WFDC10AQ9H1F0 79 aa11.15□□□□□ -0.62
HIF3A-218ENST00000600383 JOSD1Q15040 202 aaPredicted RBP11.14□□□□□ -0.63
HIF3A-218ENST00000600383 SPATA3Q8NHX4 192 aa11.14□□□□□ -0.63
HIF3A-218ENST00000600383 CITED1Q99966 193 aa11.14□□□□□ -0.63
HIF3A-218ENST00000600383 DDTP30046 118 aa11.14□□□□□ -0.63
HIF3A-218ENST00000600383 CHCHD1Q96BP2 118 aaKnown RBP11.14□□□□□ -0.63
HIF3A-218ENST00000600383 LINC01587Q99440 93 aa11.14□□□□□ -0.63
HIF3A-218ENST00000600383 TSTD3H0UI37 97 aa11.13□□□□□ -0.63
HIF3A-218ENST00000600383 PPBPP02775 128 aa11.13□□□□□ -0.63
HIF3A-218ENST00000600383 KRTDAPP60985 99 aa11.13□□□□□ -0.63
HIF3A-218ENST00000600383 FA2HQ7L5A8 372 aa11.13□□□□□ -0.63
HIF3A-218ENST00000600383 JPT2Q9H910 190 aa11.13□□□□□ -0.63
HIF3A-218ENST00000600383 IGHV3OR16-12A0A075B7B8 117 aa11.12□□□□□ -0.63
HIF3A-218ENST00000600383 TNFRSF6BO95407 300 aa11.12□□□□□ -0.63
HIF3A-218ENST00000600383 MGPP08493 103 aa11.12□□□□□ -0.63
HIF3A-218ENST00000600383 CMC4P56277 68 aaPredicted RBP11.12□□□□□ -0.63
HIF3A-218ENST00000600383 OR2K2Q8NGT1 345 aa11.12□□□□□ -0.63
HIF3A-218ENST00000600383 BEAN1Q3B7T3 259 aa11.12□□□□□ -0.63
HIF3A-218ENST00000600383 LBHQ53QV2 105 aaPredicted RBP11.12□□□□□ -0.63
HIF3A-218ENST00000600383 TMEM208Q9BTX3 173 aa11.12□□□□□ -0.63
HIF3A-218ENST00000600383 DPH3P1Q9H4G8 78 aa11.12□□□□□ -0.63
HIF3A-218ENST00000600383 AP5S1Q9NUS5 200 aa11.12□□□□□ -0.63
HIF3A-218ENST00000600383 IGHV1-24A0A0C4DH33 117 aa11.11□□□□□ -0.63
HIF3A-218ENST00000600383 NUTF2P61970 127 aaKnown RBP11.11□□□□□ -0.63
HIF3A-218ENST00000600383 TRPT1Q86TN4 253 aaKnown RBP11.11□□□□□ -0.63
HIF3A-218ENST00000600383 C9orf85Q96MD7 179 aa11.11□□□□□ -0.63
HIF3A-218ENST00000600383 AP1S3Q96PC3 154 aa11.11□□□□□ -0.63
HIF3A-218ENST00000600383 TRGV11A0A075B6L2 103 aa11.11□□□□□ -0.63
HIF3A-218ENST00000600383 A0A087WWL8 130 aa11.11□□□□□ -0.63
HIF3A-218ENST00000600383 INSP01308 110 aa11.11□□□□□ -0.63
HIF3A-218ENST00000600383 SMIM17P0DL12 118 aa11.11□□□□□ -0.63
HIF3A-218ENST00000600383 RPL35AP18077 110 aaKnown RBP11.1□□□□□ -0.63
HIF3A-218ENST00000600383 MAP1LC3AQ9H492 121 aa11.1□□□□□ -0.63
HIF3A-218ENST00000600383 ZNF876PQ49A33 203 aa11.09□□□□□ -0.63
HIF3A-218ENST00000600383 FAM74A4Q5TZK3 123 aa11.09□□□□□ -0.63
HIF3A-218ENST00000600383 CLUHP3Q96NS8 147 aa11.09□□□□□ -0.63
HIF3A-218ENST00000600383 C19orf73Q9NVV2 129 aa11.09□□□□□ -0.63
HIF3A-218ENST00000600383 A0A1B0GV90 55 aa11.09□□□□□ -0.63
HIF3A-218ENST00000600383 SYT8Q8NBV8 401 aa11.09□□□□□ -0.63
HIF3A-218ENST00000600383 F5H697 171 aa11.08□□□□□ -0.64
HIF3A-218ENST00000600383 NXPH4O95158 308 aa11.08□□□□□ -0.64
HIF3A-218ENST00000600383 C2orf88Q9BSF0 95 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms