RNA–Protein interactions for RNA: ENST00000599097.1

HOMER3-210, Transcript of homer scaffold protein 3, humanhuman

TSL 3

Gene HOMER3, Length 770 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-210ENST00000599097 SAPCD1Q5SSQ6 148 aa11.75□□□□□ -0.53
HOMER3-210ENST00000599097 SLC25A29Q8N8R3 303 aa11.75□□□□□ -0.53
HOMER3-210ENST00000599097 OR2G3Q8NGZ4 309 aa11.75□□□□□ -0.53
HOMER3-210ENST00000599097 TMEM167BQ9NRX6 74 aa11.75□□□□□ -0.53
HOMER3-210ENST00000599097 LOC100131303A0A0U1RQF7 123 aa11.74□□□□□ -0.53
HOMER3-210ENST00000599097 RS1O15537 224 aa11.74□□□□□ -0.53
HOMER3-210ENST00000599097 TCRAP04437 139 aa11.74□□□□□ -0.53
HOMER3-210ENST00000599097 TPT1P13693 172 aaKnown RBP11.74□□□□□ -0.53
HOMER3-210ENST00000599097 GNG5P63218 68 aa11.74□□□□□ -0.53
HOMER3-210ENST00000599097 LGALSLQ3ZCW2 172 aaPredicted RBP11.74□□□□□ -0.53
HOMER3-210ENST00000599097 PIK3CD-AS1Q5SR53 167 aa11.74□□□□□ -0.53
HOMER3-210ENST00000599097 CFAP126Q5VTH2 177 aa11.74□□□□□ -0.53
HOMER3-210ENST00000599097 RPL7L1Q6DKI1 246 aaKnown RBP11.74□□□□□ -0.53
HOMER3-210ENST00000599097 EIF5AL1Q6IS14 154 aaKnown RBP11.74□□□□□ -0.53
HOMER3-210ENST00000599097 Q6ZSN1 163 aa11.74□□□□□ -0.53
HOMER3-210ENST00000599097 C9orf62Q8N4C0 152 aa11.74□□□□□ -0.53
HOMER3-210ENST00000599097 STOML3Q8TAV4 291 aa11.74□□□□□ -0.53
HOMER3-210ENST00000599097 ZNF471Q9BX82 626 aaPredicted RBP11.74□□□□□ -0.53
HOMER3-210ENST00000599097 GTSF1LQ9H1H1 148 aa11.74□□□□□ -0.53
HOMER3-210ENST00000599097 GCGP01275 180 aa11.73□□□□□ -0.53
HOMER3-210ENST00000599097 SEC11BP0C7V7 166 aa11.73□□□□□ -0.53
HOMER3-210ENST00000599097 STAG3L2P0CL84 134 aa11.73□□□□□ -0.53
HOMER3-210ENST00000599097 STAG3L3P0CL85 134 aa11.73□□□□□ -0.53
HOMER3-210ENST00000599097 FUSP35637 526 aaKnown RBP eCLIP11.73□□□□□ -0.53
HOMER3-210ENST00000599097 FLI1Q01543 452 aaPredicted RBP11.73□□□□□ -0.53
HOMER3-210ENST00000599097 SLC51BQ86UW2 128 aa11.73□□□□□ -0.53
HOMER3-210ENST00000599097 Q8N814 137 aa11.73□□□□□ -0.53
HOMER3-210ENST00000599097 CYB561D1Q8N8Q1 229 aa11.73□□□□□ -0.53
HOMER3-210ENST00000599097 TMEM75Q8N9X5 138 aa11.73□□□□□ -0.53
HOMER3-210ENST00000599097 ATP6V0E2Q8NHE4 81 aa11.73□□□□□ -0.53
HOMER3-210ENST00000599097 TVP23CQ96ET8 276 aa11.73□□□□□ -0.53
HOMER3-210ENST00000599097 Q9HAA7 133 aa11.73□□□□□ -0.53
HOMER3-210ENST00000599097 A8MWV9 139 aa11.72□□□□□ -0.53
HOMER3-210ENST00000599097 CXorf1O96002 111 aa11.72□□□□□ -0.53
HOMER3-210ENST00000599097 S100A4P26447 101 aaKnown RBP11.72□□□□□ -0.53
HOMER3-210ENST00000599097 ATP6V0CP27449 155 aa11.72□□□□□ -0.53
HOMER3-210ENST00000599097 ZFP2Q6ZN57 461 aa11.72□□□□□ -0.53
HOMER3-210ENST00000599097 HSD17B11Q8NBQ5 300 aa11.72□□□□□ -0.53
HOMER3-210ENST00000599097 C9orf85Q96MD7 179 aa11.72□□□□□ -0.53
HOMER3-210ENST00000599097 CYTL1Q9NRR1 136 aa11.72□□□□□ -0.53
HOMER3-210ENST00000599097 PSG8Q9UQ74 426 aa11.72□□□□□ -0.53
HOMER3-210ENST00000599097 COX11Q9Y6N1 276 aa11.72□□□□□ -0.53
HOMER3-210ENST00000599097 A0A087WWC5 75 aa11.71□□□□□ -0.53
HOMER3-210ENST00000599097 TRAV8-3A0A0A6YYJ7 113 aa11.71□□□□□ -0.53
HOMER3-210ENST00000599097 LRCOL1A6NCL2 159 aa11.71□□□□□ -0.53
HOMER3-210ENST00000599097 HMGB3O15347 200 aaKnown RBP11.71□□□□□ -0.53
HOMER3-210ENST00000599097 GCHFRP30047 84 aa11.71□□□□□ -0.53
HOMER3-210ENST00000599097 RAB24Q969Q5 203 aa11.71□□□□□ -0.53
HOMER3-210ENST00000599097 FGF8P55075 233 aaPredicted RBP11.7□□□□□ -0.54
HOMER3-210ENST00000599097 ZNF506Q5JVG8 444 aa11.7□□□□□ -0.54
HOMER3-210ENST00000599097 SUN5Q8TC36 379 aa11.7□□□□□ -0.54
HOMER3-210ENST00000599097 ACTR3CQ9C0K3 210 aaPredicted RBP11.7□□□□□ -0.54
HOMER3-210ENST00000599097 EPDR1Q9UM22 224 aa11.7□□□□□ -0.54
HOMER3-210ENST00000599097 EIF3GO75821 320 aaKnown RBP eCLIP11.69□□□□□ -0.54
HOMER3-210ENST00000599097 IGHV3-30P01768 117 aa11.69□□□□□ -0.54
HOMER3-210ENST00000599097 IGHV3-33P01772 117 aa11.69□□□□□ -0.54
HOMER3-210ENST00000599097 IGHV3-30-3P0DP02 117 aa11.69□□□□□ -0.54
HOMER3-210ENST00000599097 IGHV3-30-5P0DP03 117 aa11.69□□□□□ -0.54
HOMER3-210ENST00000599097 ASIPP42127 132 aa11.69□□□□□ -0.54
HOMER3-210ENST00000599097 SUMO1P63165 101 aaKnown RBP11.69□□□□□ -0.54
HOMER3-210ENST00000599097 PRNTQ86SH4 94 aa11.69□□□□□ -0.54
HOMER3-210ENST00000599097 RMI2Q96E14 147 aa11.69□□□□□ -0.54
HOMER3-210ENST00000599097 NKX6-2Q9C056 277 aaPredicted RBP11.69□□□□□ -0.54
HOMER3-210ENST00000599097 A0A1W2PRE2 83 aa11.68□□□□□ -0.54
HOMER3-210ENST00000599097 UMAD1C9J7I0 102 aa11.68□□□□□ -0.54
HOMER3-210ENST00000599097 RHODO00212 210 aa11.68□□□□□ -0.54
HOMER3-210ENST00000599097 AKR1C8PQ5T2L2 129 aa11.68□□□□□ -0.54
HOMER3-210ENST00000599097 SYT8Q8NBV8 401 aa11.68□□□□□ -0.54
HOMER3-210ENST00000599097 SGK494Q96LW2 274 aa11.68□□□□□ -0.54
HOMER3-210ENST00000599097 URGCP-MRPS24S4R325 110 aa11.68□□□□□ -0.54
HOMER3-210ENST00000599097 IGHV3-73A0A0B4J1V6 119 aa11.67□□□□□ -0.54
HOMER3-210ENST00000599097 GGTLC3B5MD39 225 aa11.67□□□□□ -0.54
HOMER3-210ENST00000599097 SMR3BP02814 79 aaPredicted RBP11.67□□□□□ -0.54
HOMER3-210ENST00000599097 PGPEP1LA6NFU8 196 aa11.66□□□□□ -0.54
HOMER3-210ENST00000599097 FABP5P3A8MUU1 101 aa11.66□□□□□ -0.54
HOMER3-210ENST00000599097 IFNA7P01567 189 aa11.66□□□□□ -0.54
HOMER3-210ENST00000599097 PLA2G1BP04054 148 aaKnown RBP11.66□□□□□ -0.54
HOMER3-210ENST00000599097 RAB5CP51148 216 aa11.66□□□□□ -0.54
HOMER3-210ENST00000599097 ZNF80P51504 273 aaPredicted RBP11.66□□□□□ -0.54
HOMER3-210ENST00000599097 NKX2-5P52952 324 aaPredicted RBP11.66□□□□□ -0.54
HOMER3-210ENST00000599097 DPPA3Q6W0C5 159 aa11.66□□□□□ -0.54
HOMER3-210ENST00000599097 SRRM2Q9UQ35 2752 aaKnown RBP11.65□□□□□ -0.54
HOMER3-210ENST00000599097 IGLV2-11P01706 119 aa11.65□□□□□ -0.54
HOMER3-210ENST00000599097 RNASE3P12724 160 aaKnown RBP11.65□□□□□ -0.54
HOMER3-210ENST00000599097 PARLQ9H300 379 aa11.65□□□□□ -0.54
HOMER3-210ENST00000599097 IL36BQ9NZH7 164 aa11.65□□□□□ -0.54
HOMER3-210ENST00000599097 C11orf21Q9P2W6 132 aa11.65□□□□□ -0.54
HOMER3-210ENST00000599097 KCNIP4Q6PIL6 250 aa11.64□□□□□ -0.55
HOMER3-210ENST00000599097 HIST1H2BAQ96A08 127 aa11.64□□□□□ -0.55
HOMER3-210ENST00000599097 GAGE12JA6NER3 117 aa11.63□□□□□ -0.55
HOMER3-210ENST00000599097 GAGE1Q13065 139 aa11.63□□□□□ -0.55
HOMER3-210ENST00000599097 GAGE4Q13068 117 aa11.63□□□□□ -0.55
HOMER3-210ENST00000599097 GAGE5Q13069 117 aa11.63□□□□□ -0.55
HOMER3-210ENST00000599097 ELOBQ15370 118 aa11.63□□□□□ -0.55
HOMER3-210ENST00000599097 GAGE13Q4V321 117 aa11.63□□□□□ -0.55
HOMER3-210ENST00000599097 ARL2-SNX15V9GYD0 113 aa11.63□□□□□ -0.55
HOMER3-210ENST00000599097 CTXND1A0A1B0GTU2 59 aa11.62□□□□□ -0.55
HOMER3-210ENST00000599097 B4DEV8 164 aa11.62□□□□□ -0.55
HOMER3-210ENST00000599097 TCEAL7Q9BRU2 100 aa11.62□□□□□ -0.55
HOMER3-210ENST00000599097 CHCHD7Q9BUK0 85 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms