RNA–Protein interactions for RNA: ENST00000597297.1

PDE4C-210, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best) BASIC

Gene PDE4C, Length 1,559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-210ENST00000597297 DMRTA1Q5VZB9 504 aa8.71□□□□□ -1.02
PDE4C-210ENST00000597297 AMN1Q8IY45 258 aa8.71□□□□□ -1.02
PDE4C-210ENST00000597297 LINC00482Q8N8I6 264 aa8.71□□□□□ -1.02
PDE4C-210ENST00000597297 TRAV12-2A0A075B6T6 113 aa8.7□□□□□ -1.02
PDE4C-210ENST00000597297 SAP30O75446 220 aa8.7□□□□□ -1.02
PDE4C-210ENST00000597297 ZNF324O75467 553 aaPredicted RBP8.7□□□□□ -1.02
PDE4C-210ENST00000597297 IGLL1P15814 213 aa8.7□□□□□ -1.02
PDE4C-210ENST00000597297 S100A4P26447 101 aaKnown RBP8.7□□□□□ -1.02
PDE4C-210ENST00000597297 FAM159AQ6UWV7 190 aa8.7□□□□□ -1.02
PDE4C-210ENST00000597297 GNRH2O43555 120 aa8.69□□□□□ -1.02
PDE4C-210ENST00000597297 ZNF124Q15973 351 aa8.69□□□□□ -1.02
PDE4C-210ENST00000597297 MRPL51Q4U2R6 128 aaKnown RBP8.69□□□□□ -1.02
PDE4C-210ENST00000597297 PYY3Q5JQD4 70 aa8.69□□□□□ -1.02
PDE4C-210ENST00000597297 SPANXN1Q5VSR9 72 aa8.69□□□□□ -1.02
PDE4C-210ENST00000597297 SAMD10Q9BYL1 202 aa8.69□□□□□ -1.02
PDE4C-210ENST00000597297 TIMM8BQ9Y5J9 83 aaPredicted RBP8.69□□□□□ -1.02
PDE4C-210ENST00000597297 U3KQK5 164 aa8.69□□□□□ -1.02
PDE4C-210ENST00000597297 RBMY1BA6NDE4 496 aaKnown RBP8.69□□□□□ -1.02
PDE4C-210ENST00000597297 RBMY1EA6NEQ0 496 aaKnown RBP8.69□□□□□ -1.02
PDE4C-210ENST00000597297 D6R8Y8 96 aa8.69□□□□□ -1.02
PDE4C-210ENST00000597297 RBMY1DP0C7P1 496 aaKnown RBP8.69□□□□□ -1.02
PDE4C-210ENST00000597297 ODF3L2Q3SX64 289 aa8.69□□□□□ -1.02
PDE4C-210ENST00000597297 TDRG1Q3Y452 100 aa8.69□□□□□ -1.02
PDE4C-210ENST00000597297 SAMD5Q5TGI4 173 aa8.69□□□□□ -1.02
PDE4C-210ENST00000597297 RNASEKQ6P5S7 137 aaKnown RBP8.69□□□□□ -1.02
PDE4C-210ENST00000597297 OR2K2Q8NGT1 345 aa8.69□□□□□ -1.02
PDE4C-210ENST00000597297 RNF185Q96GF1 192 aa8.69□□□□□ -1.02
PDE4C-210ENST00000597297 SCRT2Q9NQ03 307 aa8.69□□□□□ -1.02
PDE4C-210ENST00000597297 NOTCH1P46531 2555 aa8.69□□□□□ -1.02
PDE4C-210ENST00000597297 IGLV1-51P01701 117 aa8.68□□□□□ -1.02
PDE4C-210ENST00000597297 RNASE3P12724 160 aaKnown RBP8.68□□□□□ -1.02
PDE4C-210ENST00000597297 RAB4AP20338 218 aa8.68□□□□□ -1.02
PDE4C-210ENST00000597297 PMCHP20382 165 aa8.68□□□□□ -1.02
PDE4C-210ENST00000597297 SMIM15Q7Z3B0 74 aa8.68□□□□□ -1.02
PDE4C-210ENST00000597297 NIT1Q86X76 327 aa8.68□□□□□ -1.02
PDE4C-210ENST00000597297 ORMDL3Q8N138 153 aa8.68□□□□□ -1.02
PDE4C-210ENST00000597297 URB1-AS1Q96HZ7 61 aa8.68□□□□□ -1.02
PDE4C-210ENST00000597297 PRELID3AQ96N28 172 aa8.68□□□□□ -1.02
PDE4C-210ENST00000597297 PHLDA3Q9Y5J5 127 aa8.68□□□□□ -1.02
PDE4C-210ENST00000597297 IGHV1OR15-1A0A075B7D0 117 aa8.67□□□□□ -1.02
PDE4C-210ENST00000597297 AMTP48728 403 aa8.67□□□□□ -1.02
PDE4C-210ENST00000597297 FXYD7P58549 80 aa8.67□□□□□ -1.02
PDE4C-210ENST00000597297 DEFA6Q01524 100 aa8.67□□□□□ -1.02
PDE4C-210ENST00000597297 OR11H12B2RN74 326 aa8.66□□□□□ -1.02
PDE4C-210ENST00000597297 M0R381 172 aa8.66□□□□□ -1.02
PDE4C-210ENST00000597297 CRXO43186 299 aaPredicted RBP8.66□□□□□ -1.02
PDE4C-210ENST00000597297 HSBP1O75506 76 aa8.66□□□□□ -1.02
PDE4C-210ENST00000597297 CD7P09564 240 aa8.66□□□□□ -1.02
PDE4C-210ENST00000597297 EVI2AP22794 236 aa8.66□□□□□ -1.02
PDE4C-210ENST00000597297 CKS2P33552 79 aa8.66□□□□□ -1.02
PDE4C-210ENST00000597297 CMC4P56277 68 aaPredicted RBP8.66□□□□□ -1.02
PDE4C-210ENST00000597297 JOSD1Q15040 202 aaPredicted RBP8.66□□□□□ -1.02
PDE4C-210ENST00000597297 BEAN1Q3B7T3 259 aa8.66□□□□□ -1.02
PDE4C-210ENST00000597297 CHCHD1Q96BP2 118 aaKnown RBP8.66□□□□□ -1.02
PDE4C-210ENST00000597297 CLUHP3Q96NS8 147 aa8.66□□□□□ -1.02
PDE4C-210ENST00000597297 MUC4Q99102 2169 aa8.66□□□□□ -1.02
PDE4C-210ENST00000597297 IGHV3-16A0A0C4DH30 117 aa8.65□□□□□ -1.02
PDE4C-210ENST00000597297 SMKR1H3BMG3 65 aa8.65□□□□□ -1.02
PDE4C-210ENST00000597297 SPRY2O43597 315 aa8.65□□□□□ -1.02
PDE4C-210ENST00000597297 NXPH4O95158 308 aa8.65□□□□□ -1.02
PDE4C-210ENST00000597297 NCR2O95944 276 aa8.65□□□□□ -1.02
PDE4C-210ENST00000597297 PPBPP02775 128 aa8.65□□□□□ -1.02
PDE4C-210ENST00000597297 Q6ZWC4 215 aa8.65□□□□□ -1.02
PDE4C-210ENST00000597297 NIT2Q9NQR4 276 aa8.65□□□□□ -1.02
PDE4C-210ENST00000597297 PRB2P02812 416 aaPredicted RBP8.65□□□□□ -1.03
PDE4C-210ENST00000597297 LINC00614P0C842 121 aa8.65□□□□□ -1.03
PDE4C-210ENST00000597297 RBMY1A1P0DJD3 496 aaKnown RBP8.65□□□□□ -1.03
PDE4C-210ENST00000597297 RBMY1CP0DJD4 496 aa8.65□□□□□ -1.03
PDE4C-210ENST00000597297 RBMY1FQ15415 496 aaKnown RBP8.65□□□□□ -1.03
PDE4C-210ENST00000597297 KPRPQ5T749 579 aaPredicted RBP8.65□□□□□ -1.03
PDE4C-210ENST00000597297 FAM19A2Q8N3H0 131 aa8.65□□□□□ -1.03
PDE4C-210ENST00000597297 C9orf85Q96MD7 179 aa8.65□□□□□ -1.03
PDE4C-210ENST00000597297 DNAH3Q8TD57 4116 aa8.64□□□□□ -1.03
PDE4C-210ENST00000597297 TRGV11A0A075B6L2 103 aa8.64□□□□□ -1.03
PDE4C-210ENST00000597297 NPYP01303 97 aa8.64□□□□□ -1.03
PDE4C-210ENST00000597297 CDPF1Q6NVV7 123 aa8.64□□□□□ -1.03
PDE4C-210ENST00000597297 STHQ8IWL8 128 aa8.64□□□□□ -1.03
PDE4C-210ENST00000597297 Q8N1Y9 231 aa8.64□□□□□ -1.03
PDE4C-210ENST00000597297 LAMTOR2Q9Y2Q5 125 aa8.64□□□□□ -1.03
PDE4C-210ENST00000597297 KRTAP10-11P60412 298 aa8.63□□□□□ -1.03
PDE4C-210ENST00000597297 FA2HQ7L5A8 372 aa8.63□□□□□ -1.03
PDE4C-210ENST00000597297 TRPT1Q86TN4 253 aaKnown RBP8.63□□□□□ -1.03
PDE4C-210ENST00000597297 PRSS3P2Q8NHM4 247 aa8.63□□□□□ -1.03
PDE4C-210ENST00000597297 AP1S3Q96PC3 154 aa8.63□□□□□ -1.03
PDE4C-210ENST00000597297 FAM110AQ9BQ89 295 aa8.63□□□□□ -1.03
PDE4C-210ENST00000597297 DPH3P1Q9H4G8 78 aa8.63□□□□□ -1.03
PDE4C-210ENST00000597297 MDFICQ9P1T7 246 aa8.63□□□□□ -1.03
PDE4C-210ENST00000597297 MEGF8Q7Z7M0 2845 aa8.62□□□□□ -1.03
PDE4C-210ENST00000597297 IGHV1-24A0A0C4DH33 117 aa8.62□□□□□ -1.03
PDE4C-210ENST00000597297 CBY3A6NI87 242 aa8.62□□□□□ -1.03
PDE4C-210ENST00000597297 GAS8-AS1O95177 125 aa8.62□□□□□ -1.03
PDE4C-210ENST00000597297 INSP01308 110 aa8.62□□□□□ -1.03
PDE4C-210ENST00000597297 C20orf144Q9BQM9 153 aa8.62□□□□□ -1.03
PDE4C-210ENST00000597297 MCRIP2Q9BUT9 160 aaKnown RBP8.62□□□□□ -1.03
PDE4C-210ENST00000597297 LOC389332A0A1B0GUA5 103 aa8.61□□□□□ -1.03
PDE4C-210ENST00000597297 TNFRSF6BO95407 300 aa8.61□□□□□ -1.03
PDE4C-210ENST00000597297 IFI27P40305 119 aaPredicted RBP8.61□□□□□ -1.03
PDE4C-210ENST00000597297 C14orf178Q8N769 122 aaPredicted RBP8.61□□□□□ -1.03
PDE4C-210ENST00000597297 MRAP2Q96G30 205 aa8.61□□□□□ -1.03
PDE4C-210ENST00000597297 MAP1LC3AQ9H492 121 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms