RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 NUDT11Q96G61 164 aa10.15□□□□□ -0.78
VRK3-213ENST00000597215 NDUFAF3Q9BU61 184 aa10.15□□□□□ -0.78
VRK3-213ENST00000597215 NAT8Q9UHE5 227 aa10.15□□□□□ -0.78
VRK3-213ENST00000597215 STARD9Q9P2P6 4700 aa10.15□□□□□ -0.79
VRK3-213ENST00000597215 MUC4Q99102 2169 aa10.14□□□□□ -0.79
VRK3-213ENST00000597215 UQCC3Q6UW78 93 aa10.14□□□□□ -0.79
VRK3-213ENST00000597215 FAM210BQ96KR6 192 aa10.14□□□□□ -0.79
VRK3-213ENST00000597215 RNASE7Q9H1E1 156 aaKnown RBP10.14□□□□□ -0.79
VRK3-213ENST00000597215 RPP21Q9H633 154 aaKnown RBP10.14□□□□□ -0.79
VRK3-213ENST00000597215 CSMD3Q7Z407 3707 aa10.14□□□□□ -0.79
VRK3-213ENST00000597215 TRAV4A0A0B4J268 109 aa10.13□□□□□ -0.79
VRK3-213ENST00000597215 IGLL5B9A064 214 aa10.13□□□□□ -0.79
VRK3-213ENST00000597215 F5H768 121 aa10.13□□□□□ -0.79
VRK3-213ENST00000597215 SFTA3P0C7M3 94 aa10.13□□□□□ -0.79
VRK3-213ENST00000597215 PIK3CD-AS1Q5SR53 167 aa10.13□□□□□ -0.79
VRK3-213ENST00000597215 FAM231DQ6ZW35 169 aa10.13□□□□□ -0.79
VRK3-213ENST00000597215 SYT8Q8NBV8 401 aa10.13□□□□□ -0.79
VRK3-213ENST00000597215 SCRT2Q9NQ03 307 aa10.13□□□□□ -0.79
VRK3-213ENST00000597215 PHLDA3Q9Y5J5 127 aa10.13□□□□□ -0.79
VRK3-213ENST00000597215 GATCO43716 136 aaKnown RBP10.12□□□□□ -0.79
VRK3-213ENST00000597215 IGHV3-53P01767 116 aa10.12□□□□□ -0.79
VRK3-213ENST00000597215 ERVFC1-1P60608 527 aa10.12□□□□□ -0.79
VRK3-213ENST00000597215 RPL23P62829 140 aaKnown RBP10.12□□□□□ -0.79
VRK3-213ENST00000597215 ADIRFQ15847 76 aa10.12□□□□□ -0.79
VRK3-213ENST00000597215 COMMD7Q86VX2 200 aa10.12□□□□□ -0.79
VRK3-213ENST00000597215 DYNC2H1Q8NCM8 4307 aaKnown RBP10.11□□□□□ -0.79
VRK3-213ENST00000597215 IGHV4-4A0A075B6R2 117 aa10.11□□□□□ -0.79
VRK3-213ENST00000597215 LINC00862A6NCI5 91 aa10.11□□□□□ -0.79
VRK3-213ENST00000597215 SNAI2O43623 268 aa10.11□□□□□ -0.79
VRK3-213ENST00000597215 OR5AL1P0C617 328 aa10.11□□□□□ -0.79
VRK3-213ENST00000597215 GZMBP10144 247 aa10.11□□□□□ -0.79
VRK3-213ENST00000597215 TCTAP57738 103 aa10.11□□□□□ -0.79
VRK3-213ENST00000597215 ZFP82Q8N141 532 aa10.11□□□□□ -0.79
VRK3-213ENST00000597215 FER1L6-AS1Q8NA97 138 aa10.11□□□□□ -0.79
VRK3-213ENST00000597215 OR4C5Q8NGB2 326 aa10.11□□□□□ -0.79
VRK3-213ENST00000597215 ISOC2Q96AB3 205 aa10.11□□□□□ -0.79
VRK3-213ENST00000597215 OSTCQ9NRP0 149 aa10.11□□□□□ -0.79
VRK3-213ENST00000597215 A8MWV9 139 aa10.1□□□□□ -0.79
VRK3-213ENST00000597215 M0R381 172 aa10.1□□□□□ -0.79
VRK3-213ENST00000597215 RS1O15537 224 aa10.1□□□□□ -0.79
VRK3-213ENST00000597215 IGLC6P0CF74 106 aa10.1□□□□□ -0.79
VRK3-213ENST00000597215 HOXA5P20719 270 aa10.1□□□□□ -0.79
VRK3-213ENST00000597215 DMRTA1Q5VZB9 504 aa10.1□□□□□ -0.79
VRK3-213ENST00000597215 TMEM88Q6PEY1 159 aa10.1□□□□□ -0.79
VRK3-213ENST00000597215 POM121L12Q8N7R1 296 aa10.1□□□□□ -0.79
VRK3-213ENST00000597215 C15orf54Q8N8G6 183 aa10.1□□□□□ -0.79
VRK3-213ENST00000597215 ZNF479Q96JC4 524 aa10.1□□□□□ -0.79
VRK3-213ENST00000597215 SSBP4Q9BWG4 385 aaPredicted RBP10.1□□□□□ -0.79
VRK3-213ENST00000597215 TRGV4A0A0C4DH28 118 aa10.09□□□□□ -0.79
VRK3-213ENST00000597215 A0A1W2PPQ1 181 aa10.09□□□□□ -0.79
VRK3-213ENST00000597215 A8MWL6 223 aa10.09□□□□□ -0.79
VRK3-213ENST00000597215 CIDEAO60543 219 aa10.09□□□□□ -0.79
VRK3-213ENST00000597215 SLAQ13239 276 aa10.09□□□□□ -0.79
VRK3-213ENST00000597215 CT83Q5H943 113 aa10.09□□□□□ -0.79
VRK3-213ENST00000597215 CFAP126Q5VTH2 177 aa10.09□□□□□ -0.79
VRK3-213ENST00000597215 OR10AG1Q8NH19 301 aa10.09□□□□□ -0.79
VRK3-213ENST00000597215 SFRP2Q96HF1 295 aa10.09□□□□□ -0.79
VRK3-213ENST00000597215 TPPP3Q9BW30 176 aa10.09□□□□□ -0.79
VRK3-213ENST00000597215 NACAE9PAV3 2078 aa10.08□□□□□ -0.8
VRK3-213ENST00000597215 F2Z2F3 143 aa10.08□□□□□ -0.8
VRK3-213ENST00000597215 NXPH4O95158 308 aa10.08□□□□□ -0.8
VRK3-213ENST00000597215 FHL2Q14192 279 aa10.08□□□□□ -0.8
VRK3-213ENST00000597215 SPANXN1Q5VSR9 72 aa10.08□□□□□ -0.8
VRK3-213ENST00000597215 C15orf53Q8NAA6 179 aa10.08□□□□□ -0.8
VRK3-213ENST00000597215 TRAV26-1A0A087WT03 109 aa10.07□□□□□ -0.8
VRK3-213ENST00000597215 TMEM218A2RU14 115 aa10.07□□□□□ -0.8
VRK3-213ENST00000597215 CACNG7P62955 275 aa10.07□□□□□ -0.8
VRK3-213ENST00000597215 PNRC1Q12796 327 aaPredicted RBP10.07□□□□□ -0.8
VRK3-213ENST00000597215 OR10G8Q8NGN5 311 aa10.07□□□□□ -0.8
VRK3-213ENST00000597215 PRO0255Q9UI72 69 aa10.07□□□□□ -0.8
VRK3-213ENST00000597215 APLNQ9ULZ1 77 aa10.07□□□□□ -0.8
VRK3-213ENST00000597215 TENM2Q9NT68 2774 aa10.06□□□□□ -0.8
VRK3-213ENST00000597215 MUC21A0A0G2JKD1 596 aa10.06□□□□□ -0.8
VRK3-213ENST00000597215 A0A0J9YY99 117 aa10.06□□□□□ -0.8
VRK3-213ENST00000597215 MUC21A0A140T8X8 626 aa10.06□□□□□ -0.8
VRK3-213ENST00000597215 H3BNG1 76 aa10.06□□□□□ -0.8
VRK3-213ENST00000597215 RHODO00212 210 aa10.06□□□□□ -0.8
VRK3-213ENST00000597215 PAX4O43316 350 aa10.06□□□□□ -0.8
VRK3-213ENST00000597215 CTRLP40313 264 aa10.06□□□□□ -0.8
VRK3-213ENST00000597215 LYZL1Q6UWQ5 148 aa10.06□□□□□ -0.8
VRK3-213ENST00000597215 ZFP2Q6ZN57 461 aa10.06□□□□□ -0.8
VRK3-213ENST00000597215 JPT2Q9H910 190 aa10.06□□□□□ -0.8
VRK3-213ENST00000597215 HHLA3Q9XRX5 114 aa10.06□□□□□ -0.8
VRK3-213ENST00000597215 V9GYV3 84 aa10.06□□□□□ -0.8
VRK3-213ENST00000597215 GATA1P15976 413 aaPredicted RBP10.05□□□□□ -0.8
VRK3-213ENST00000597215 CRYBA4P53673 196 aa10.05□□□□□ -0.8
VRK3-213ENST00000597215 WDR73Q6P4I2 378 aa10.05□□□□□ -0.8
VRK3-213ENST00000597215 TSKUQ8WUA8 353 aa10.05□□□□□ -0.8
VRK3-213ENST00000597215 GFRA4Q9GZZ7 299 aa10.05□□□□□ -0.8
VRK3-213ENST00000597215 KMT2CQ8NEZ4 4911 aaKnown RBP10.04□□□□□ -0.8
VRK3-213ENST00000597215 PLECQ15149 4684 aaKnown RBP10.04□□□□□ -0.8
VRK3-213ENST00000597215 IGHV3-73A0A0B4J1V6 119 aa10.04□□□□□ -0.8
VRK3-213ENST00000597215 FAM231BA6NCW3 169 aa10.04□□□□□ -0.8
VRK3-213ENST00000597215 F8W036 122 aa10.04□□□□□ -0.8
VRK3-213ENST00000597215 NUDT3O95989 172 aa10.04□□□□□ -0.8
VRK3-213ENST00000597215 SSTP61278 116 aa10.04□□□□□ -0.8
VRK3-213ENST00000597215 FAM74A4Q5TZK3 123 aa10.04□□□□□ -0.8
VRK3-213ENST00000597215 GTSF1Q8WW33 167 aa10.04□□□□□ -0.8
VRK3-213ENST00000597215 VSIG2Q96IQ7 327 aa10.04□□□□□ -0.8
VRK3-213ENST00000597215 AP1S3Q96PC3 154 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms