RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 GAGE13Q4V321 117 aa6.51□□□□□ -1.37
LIG1-209ENST00000596104 PQLC2Q6ZP29 291 aa6.51□□□□□ -1.37
LIG1-209ENST00000596104 Q8N976 141 aa6.51□□□□□ -1.37
LIG1-209ENST00000596104 DNAJC30Q96LL9 226 aa6.51□□□□□ -1.37
LIG1-209ENST00000596104 LINC00479Q96M42 142 aa6.51□□□□□ -1.37
LIG1-209ENST00000596104 CCDC32Q9BV29 185 aa6.51□□□□□ -1.37
LIG1-209ENST00000596104 SH3BGRL3Q9H299 93 aa6.51□□□□□ -1.37
LIG1-209ENST00000596104 HSPB11Q9Y547 144 aa6.51□□□□□ -1.37
LIG1-209ENST00000596104 UBR4Q5T4S7 5183 aa6.5□□□□□ -1.37
LIG1-209ENST00000596104 A0A087WWC5 75 aa6.5□□□□□ -1.37
LIG1-209ENST00000596104 SERTM2A0A1B0GWG4 89 aa6.5□□□□□ -1.37
LIG1-209ENST00000596104 TAAR5O14804 337 aa6.5□□□□□ -1.37
LIG1-209ENST00000596104 GCGP01275 180 aa6.5□□□□□ -1.37
LIG1-209ENST00000596104 IGLV2-11P01706 119 aa6.5□□□□□ -1.37
LIG1-209ENST00000596104 IGLV2-8P01709 118 aa6.5□□□□□ -1.37
LIG1-209ENST00000596104 UFSP1Q6NVU6 142 aa6.5□□□□□ -1.37
LIG1-209ENST00000596104 ZFP2Q6ZN57 461 aa6.5□□□□□ -1.37
LIG1-209ENST00000596104 CYB561D1Q8N8Q1 229 aa6.5□□□□□ -1.37
LIG1-209ENST00000596104 SCGB1C1Q8TD33 95 aa6.5□□□□□ -1.37
LIG1-209ENST00000596104 PPP1R1CQ8WVI7 109 aa6.5□□□□□ -1.37
LIG1-209ENST00000596104 NDFIP1Q9BT67 221 aa6.5□□□□□ -1.37
LIG1-209ENST00000596104 A0A1W2PPV4 95 aa6.49□□□□□ -1.37
LIG1-209ENST00000596104 A8MWV9 139 aa6.49□□□□□ -1.37
LIG1-209ENST00000596104 HMGB3O15347 200 aaKnown RBP6.49□□□□□ -1.37
LIG1-209ENST00000596104 TCRAP04437 139 aa6.49□□□□□ -1.37
LIG1-209ENST00000596104 H2BFSP57053 126 aa6.49□□□□□ -1.37
LIG1-209ENST00000596104 RAB2AP61019 212 aa6.49□□□□□ -1.37
LIG1-209ENST00000596104 CYCSP99999 105 aaKnown RBP6.49□□□□□ -1.37
LIG1-209ENST00000596104 ACOT6Q3I5F7 207 aaPredicted RBP6.49□□□□□ -1.37
LIG1-209ENST00000596104 PIK3CD-AS1Q5SR53 167 aa6.49□□□□□ -1.37
LIG1-209ENST00000596104 NIT1Q86X76 327 aa6.49□□□□□ -1.37
LIG1-209ENST00000596104 C14orf178Q8N769 122 aaPredicted RBP6.49□□□□□ -1.37
LIG1-209ENST00000596104 C5orf17Q8NAS9 161 aa6.49□□□□□ -1.37
LIG1-209ENST00000596104 RMI2Q96E14 147 aa6.49□□□□□ -1.37
LIG1-209ENST00000596104 SAMD10Q9BYL1 202 aa6.49□□□□□ -1.37
LIG1-209ENST00000596104 SMIM3Q9BZL3 60 aa6.49□□□□□ -1.37
LIG1-209ENST00000596104 WFDC1Q9HC57 220 aa6.49□□□□□ -1.37
LIG1-209ENST00000596104 PSG8Q9UQ74 426 aa6.49□□□□□ -1.37
LIG1-209ENST00000596104 IGKV2D-24A0A075B6R9 120 aa6.48□□□□□ -1.37
LIG1-209ENST00000596104 IGKV3D-20A0A0C4DH25 116 aa6.48□□□□□ -1.37
LIG1-209ENST00000596104 ARL14EPLP0DKL9 152 aa6.48□□□□□ -1.37
LIG1-209ENST00000596104 HNRNPA3P51991 378 aaKnown RBP6.48□□□□□ -1.37
LIG1-209ENST00000596104 SMUG1Q53HV7 270 aa6.48□□□□□ -1.37
LIG1-209ENST00000596104 MZT2BQ6NZ67 158 aa6.48□□□□□ -1.37
LIG1-209ENST00000596104 ATRAIDQ6UW56 229 aa6.48□□□□□ -1.37
LIG1-209ENST00000596104 OR2T35Q8NGX2 323 aa6.48□□□□□ -1.37
LIG1-209ENST00000596104 SUN5Q8TC36 379 aa6.48□□□□□ -1.37
LIG1-209ENST00000596104 JPT2Q9H910 190 aa6.48□□□□□ -1.37
LIG1-209ENST00000596104 KLK12Q9UKR0 248 aa6.48□□□□□ -1.37
LIG1-209ENST00000596104 MPC2O95563 127 aa6.47□□□□□ -1.37
LIG1-209ENST00000596104 RPL12P30050 165 aaKnown RBP6.47□□□□□ -1.37
LIG1-209ENST00000596104 FGF8P55075 233 aaPredicted RBP6.47□□□□□ -1.37
LIG1-209ENST00000596104 FLI1Q01543 452 aaPredicted RBP6.47□□□□□ -1.37
LIG1-209ENST00000596104 OR10G9Q8NGN4 311 aa6.47□□□□□ -1.37
LIG1-209ENST00000596104 OR10G7Q8NGN6 311 aa6.47□□□□□ -1.37
LIG1-209ENST00000596104 SEC11BP0C7V7 166 aa6.46□□□□□ -1.38
LIG1-209ENST00000596104 STAG3L2P0CL84 134 aa6.46□□□□□ -1.38
LIG1-209ENST00000596104 STAG3L3P0CL85 134 aa6.46□□□□□ -1.38
LIG1-209ENST00000596104 LGALSLQ3ZCW2 172 aaPredicted RBP6.46□□□□□ -1.38
LIG1-209ENST00000596104 ZFP69Q49AA0 526 aa6.46□□□□□ -1.38
LIG1-209ENST00000596104 PRNTQ86SH4 94 aa6.46□□□□□ -1.38
LIG1-209ENST00000596104 UBE2WQ96B02 151 aa6.46□□□□□ -1.38
LIG1-209ENST00000596104 DAZAP1Q96EP5 407 aaKnown RBP6.46□□□□□ -1.38
LIG1-209ENST00000596104 CHCHD7Q9BUK0 85 aa6.46□□□□□ -1.38
LIG1-209ENST00000596104 EPDR1Q9UM22 224 aa6.46□□□□□ -1.38
LIG1-209ENST00000596104 URGCP-MRPS24S4R325 110 aa6.46□□□□□ -1.38
LIG1-209ENST00000596104 K7EQM0 130 aa6.45□□□□□ -1.38
LIG1-209ENST00000596104 PET100P0DJ07 73 aa6.45□□□□□ -1.38
LIG1-209ENST00000596104 MT1HL1P0DM35 61 aa6.45□□□□□ -1.38
LIG1-209ENST00000596104 S100A4P26447 101 aaKnown RBP6.45□□□□□ -1.38
LIG1-209ENST00000596104 GCHFRP30047 84 aa6.45□□□□□ -1.38
LIG1-209ENST00000596104 CDC34P49427 236 aaPredicted RBP6.45□□□□□ -1.38
LIG1-209ENST00000596104 RPL37AP61513 92 aaKnown RBP6.45□□□□□ -1.38
LIG1-209ENST00000596104 SUMO1P63165 101 aaKnown RBP6.45□□□□□ -1.38
LIG1-209ENST00000596104 SAPCD1Q5SSQ6 148 aa6.45□□□□□ -1.38
LIG1-209ENST00000596104 DMRTA1Q5VZB9 504 aa6.45□□□□□ -1.38
LIG1-209ENST00000596104 ENKURQ8TC29 256 aa6.45□□□□□ -1.38
LIG1-209ENST00000596104 IL36BQ9NZH7 164 aa6.45□□□□□ -1.38
LIG1-209ENST00000596104 A0A087WX48 190 aa6.44□□□□□ -1.38
LIG1-209ENST00000596104 INMT-MINDY4F8WBC2 141 aa6.44□□□□□ -1.38
LIG1-209ENST00000596104 RHODO00212 210 aa6.44□□□□□ -1.38
LIG1-209ENST00000596104 ASIPP42127 132 aa6.44□□□□□ -1.38
LIG1-209ENST00000596104 ELOBQ15370 118 aa6.44□□□□□ -1.38
LIG1-209ENST00000596104 C14orf177Q52M58 125 aa6.44□□□□□ -1.38
LIG1-209ENST00000596104 OR2G3Q8NGZ4 309 aa6.44□□□□□ -1.38
LIG1-209ENST00000596104 RAB24Q969Q5 203 aa6.44□□□□□ -1.38
LIG1-209ENST00000596104 TRAV34A0A0B4J273 112 aa6.43□□□□□ -1.38
LIG1-209ENST00000596104 FABP5P3A8MUU1 101 aa6.43□□□□□ -1.38
LIG1-209ENST00000596104 H3BVH4 76 aa6.43□□□□□ -1.38
LIG1-209ENST00000596104 DNLZQ5SXM8 178 aa6.43□□□□□ -1.38
LIG1-209ENST00000596104 ENHOQ6UWT2 76 aa6.43□□□□□ -1.38
LIG1-209ENST00000596104 LINC00299Q6ZSB3 139 aa6.43□□□□□ -1.38
LIG1-209ENST00000596104 ARL2-SNX15V9GYD0 113 aa6.43□□□□□ -1.38
LIG1-209ENST00000596104 PKHD1L1Q86WI1 4243 aa6.42□□□□□ -1.38
LIG1-209ENST00000596104 B4DEV8 164 aa6.42□□□□□ -1.38
LIG1-209ENST00000596104 UPK1BO75841 260 aa6.42□□□□□ -1.38
LIG1-209ENST00000596104 ARMS2P0C7Q2 107 aa6.42□□□□□ -1.38
LIG1-209ENST00000596104 CRIP1P50238 77 aa6.42□□□□□ -1.38
LIG1-209ENST00000596104 UBE2D3P61077 147 aa6.42□□□□□ -1.38
LIG1-209ENST00000596104 UBE2D2P62837 147 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms