RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 TIRAPP58753 221 aa15.92■□□□□ 0.14
LSM4-204ENST00000594828 MSRB1Q9NZV6 116 aa15.92■□□□□ 0.14
LSM4-204ENST00000594828 MAP1LC3B2A6NCE7 125 aa15.91■□□□□ 0.14
LSM4-204ENST00000594828 S100A4P26447 101 aaKnown RBP15.91■□□□□ 0.14
LSM4-204ENST00000594828 ERVFC1-1P60608 527 aa15.91■□□□□ 0.14
LSM4-204ENST00000594828 RHOHQ15669 191 aa15.91■□□□□ 0.14
LSM4-204ENST00000594828 KRTAP4-5Q9BYR2 181 aa15.91■□□□□ 0.14
LSM4-204ENST00000594828 MAP1LC3BQ9GZQ8 125 aa15.91■□□□□ 0.14
LSM4-204ENST00000594828 SMLR1H3BR10 107 aa15.9■□□□□ 0.14
LSM4-204ENST00000594828 MAPKAPK5-AS1Q8N8E1 139 aa15.9■□□□□ 0.14
LSM4-204ENST00000594828 CRYGDP07320 174 aa15.89■□□□□ 0.13
LSM4-204ENST00000594828 Q86TA4 180 aa15.89■□□□□ 0.13
LSM4-204ENST00000594828 C10orf126Q8N4M7 172 aa15.89■□□□□ 0.13
LSM4-204ENST00000594828 PGPEP1Q9NXJ5 209 aa15.89■□□□□ 0.13
LSM4-204ENST00000594828 HSPG2P98160 4391 aa15.89■□□□□ 0.13
LSM4-204ENST00000594828 IGHV3-38A0A0C4DH36 116 aa15.88■□□□□ 0.13
LSM4-204ENST00000594828 MGST1P10620 155 aaKnown RBP15.88■□□□□ 0.13
LSM4-204ENST00000594828 ASIPP42127 132 aa15.88■□□□□ 0.13
LSM4-204ENST00000594828 STOML3Q8TAV4 291 aa15.88■□□□□ 0.13
LSM4-204ENST00000594828 ZFP30Q9Y2G7 519 aa15.88■□□□□ 0.13
LSM4-204ENST00000594828 TRAV8-6A0A0B4J262 113 aa15.87■□□□□ 0.13
LSM4-204ENST00000594828 A8MWV9 139 aa15.86■□□□□ 0.13
LSM4-204ENST00000594828 B4DEV8 164 aa15.86■□□□□ 0.13
LSM4-204ENST00000594828 CRIP1P50238 77 aa15.86■□□□□ 0.13
LSM4-204ENST00000594828 LGALSLQ3ZCW2 172 aaPredicted RBP15.86■□□□□ 0.13
LSM4-204ENST00000594828 PIK3CD-AS1Q5SR53 167 aa15.86■□□□□ 0.13
LSM4-204ENST00000594828 KCNRGQ8N5I3 272 aa15.86■□□□□ 0.13
LSM4-204ENST00000594828 A0A087WTM6 91 aa15.85■□□□□ 0.13
LSM4-204ENST00000594828 FHITP49789 147 aa15.85■□□□□ 0.13
LSM4-204ENST00000594828 UBE2G1P62253 170 aa15.85■□□□□ 0.13
LSM4-204ENST00000594828 ZNF345Q14585 488 aa15.85■□□□□ 0.13
LSM4-204ENST00000594828 OR10J3Q5JRS4 329 aa15.85■□□□□ 0.13
LSM4-204ENST00000594828 CST9LP1Q5W188 147 aa15.85■□□□□ 0.13
LSM4-204ENST00000594828 ZFP2Q6ZN57 461 aa15.85■□□□□ 0.13
LSM4-204ENST00000594828 ZC2HC1AQ96GY0 325 aa15.85■□□□□ 0.13
LSM4-204ENST00000594828 FMC1Q96HJ9 113 aa15.85■□□□□ 0.13
LSM4-204ENST00000594828 PARLQ9H300 379 aa15.85■□□□□ 0.13
LSM4-204ENST00000594828 IL36BQ9NZH7 164 aa15.85■□□□□ 0.13
LSM4-204ENST00000594828 BOLA1Q9Y3E2 137 aa15.85■□□□□ 0.13
LSM4-204ENST00000594828 FUSP35637 526 aaKnown RBP eCLIP15.84■□□□□ 0.13
LSM4-204ENST00000594828 COX8CQ7Z4L0 72 aa15.84■□□□□ 0.13
LSM4-204ENST00000594828 ATP6V0E2Q8NHE4 81 aa15.84■□□□□ 0.13
LSM4-204ENST00000594828 TCEAL7Q9BRU2 100 aa15.84■□□□□ 0.13
LSM4-204ENST00000594828 KRBOX1C9JBD0 128 aa15.83■□□□□ 0.12
LSM4-204ENST00000594828 SH2D1AO60880 128 aa15.83■□□□□ 0.12
LSM4-204ENST00000594828 LINC01556Q5JQF7 62 aa15.83■□□□□ 0.12
LSM4-204ENST00000594828 FAM162BQ5T6X4 162 aa15.83■□□□□ 0.12
LSM4-204ENST00000594828 CDPF1Q6NVV7 123 aa15.83■□□□□ 0.12
LSM4-204ENST00000594828 Q6ZSN1 163 aa15.83■□□□□ 0.12
LSM4-204ENST00000594828 GTSF1LQ9H1H1 148 aa15.83■□□□□ 0.12
LSM4-204ENST00000594828 HMSDA8MTL9 139 aa15.82■□□□□ 0.12
LSM4-204ENST00000594828 H3BVH4 76 aa15.82■□□□□ 0.12
LSM4-204ENST00000594828 M0R036 132 aa15.82■□□□□ 0.12
LSM4-204ENST00000594828 SEC11BP0C7V7 166 aa15.82■□□□□ 0.12
LSM4-204ENST00000594828 DNLZQ5SXM8 178 aa15.82■□□□□ 0.12
LSM4-204ENST00000594828 LELP1Q5T871 98 aa15.82■□□□□ 0.12
LSM4-204ENST00000594828 TRBV6-1A0A0K0K1D8 114 aa15.81■□□□□ 0.12
LSM4-204ENST00000594828 ARMS2P0C7Q2 107 aa15.81■□□□□ 0.12
LSM4-204ENST00000594828 DMRTA1Q5VZB9 504 aa15.81■□□□□ 0.12
LSM4-204ENST00000594828 Q8N1X5 172 aa15.81■□□□□ 0.12
LSM4-204ENST00000594828 OR11H4Q8NGC9 324 aa15.81■□□□□ 0.12
LSM4-204ENST00000594828 SFT2D1Q8WV19 159 aa15.81■□□□□ 0.12
LSM4-204ENST00000594828 JPT2Q9H910 190 aa15.81■□□□□ 0.12
LSM4-204ENST00000594828 DNAH5Q8TE73 4624 aa15.8■□□□□ 0.12
LSM4-204ENST00000594828 A0A0D9SG52 128 aa15.8■□□□□ 0.12
LSM4-204ENST00000594828 GRIFINA4D1Z8 144 aa15.8■□□□□ 0.12
LSM4-204ENST00000594828 UMAD1C9J7I0 102 aa15.8■□□□□ 0.12
LSM4-204ENST00000594828 PAGE4O60829 102 aa15.8■□□□□ 0.12
LSM4-204ENST00000594828 LTAP01374 205 aa15.8■□□□□ 0.12
LSM4-204ENST00000594828 ZNF674Q2M3X9 581 aa15.8■□□□□ 0.12
LSM4-204ENST00000594828 SYT8Q8NBV8 401 aa15.8■□□□□ 0.12
LSM4-204ENST00000594828 MBD3L1Q8WWY6 194 aa15.8■□□□□ 0.12
LSM4-204ENST00000594828 ABCA13Q86UQ4 5058 aa15.79■□□□□ 0.12
LSM4-204ENST00000594828 IBA57-AS1B1ANH7 110 aa15.79■□□□□ 0.12
LSM4-204ENST00000594828 AKR1C3P42330 323 aa15.79■□□□□ 0.12
LSM4-204ENST00000594828 FAM213BQ8TBF2 198 aa15.79■□□□□ 0.12
LSM4-204ENST00000594828 ZNF471Q9BX82 626 aaPredicted RBP15.79■□□□□ 0.12
LSM4-204ENST00000594828 SAMD10Q9BYL1 202 aa15.79■□□□□ 0.12
LSM4-204ENST00000594828 SCRT2Q9NQ03 307 aa15.79■□□□□ 0.12
LSM4-204ENST00000594828 APOBP04114 4563 aaKnown RBP15.78■□□□□ 0.12
LSM4-204ENST00000594828 KANTRA0A1W2PQU2 76 aa15.78■□□□□ 0.12
LSM4-204ENST00000594828 GAGE12JA6NER3 117 aa15.78■□□□□ 0.12
LSM4-204ENST00000594828 PSCAO43653 123 aa15.78■□□□□ 0.12
LSM4-204ENST00000594828 IGHV3-30P01768 117 aa15.78■□□□□ 0.12
LSM4-204ENST00000594828 IGHV3-33P01772 117 aa15.78■□□□□ 0.12
LSM4-204ENST00000594828 IGHV3-30-3P0DP02 117 aa15.78■□□□□ 0.12
LSM4-204ENST00000594828 IGHV3-30-5P0DP03 117 aa15.78■□□□□ 0.12
LSM4-204ENST00000594828 GAGE1Q13065 139 aa15.78■□□□□ 0.12
LSM4-204ENST00000594828 GAGE4Q13068 117 aa15.78■□□□□ 0.12
LSM4-204ENST00000594828 GAGE5Q13069 117 aa15.78■□□□□ 0.12
LSM4-204ENST00000594828 GAGE13Q4V321 117 aa15.78■□□□□ 0.12
LSM4-204ENST00000594828 UFSP1Q6NVU6 142 aa15.78■□□□□ 0.12
LSM4-204ENST00000594828 PHLDA3Q9Y5J5 127 aa15.78■□□□□ 0.12
LSM4-204ENST00000594828 BCL2L11O43521 198 aa15.77■□□□□ 0.12
LSM4-204ENST00000594828 LINC01559Q495D7 138 aa15.77■□□□□ 0.12
LSM4-204ENST00000594828 TMSB15BA0A087X1C1 80 aa15.76■□□□□ 0.11
LSM4-204ENST00000594828 A0A1B0GV50 99 aa15.76■□□□□ 0.11
LSM4-204ENST00000594828 RHODO00212 210 aa15.76■□□□□ 0.11
LSM4-204ENST00000594828 TPT1P13693 172 aaKnown RBP15.76■□□□□ 0.11
LSM4-204ENST00000594828 S100A9P06702 114 aaKnown RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms