RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 TWIST1Q15672 202 aa15.17■□□□□ 0.02
PNKP-203ENST00000593946 ZNF493Q6ZR52 646 aa15.17■□□□□ 0.02
PNKP-203ENST00000593946 LINC00467Q9BRT7 94 aa15.17■□□□□ 0.02
PNKP-203ENST00000593946 CACNG7P62955 275 aa15.17■□□□□ 0.02
PNKP-203ENST00000593946 MSRB1Q9NZV6 116 aa15.17■□□□□ 0.02
PNKP-203ENST00000593946 TIMM8BQ9Y5J9 83 aaPredicted RBP15.17■□□□□ 0.02
PNKP-203ENST00000593946 CMYA5Q8N3K9 4069 aa15.16■□□□□ 0.02
PNKP-203ENST00000593946 TRGV11A0A075B6L2 103 aa15.16■□□□□ 0.02
PNKP-203ENST00000593946 APCSP02743 223 aa15.16■□□□□ 0.02
PNKP-203ENST00000593946 C1orf158Q8N1D5 194 aa15.16■□□□□ 0.02
PNKP-203ENST00000593946 TMEM256Q8N2U0 113 aa15.16■□□□□ 0.02
PNKP-203ENST00000593946 EGFEM1PQ0D2K5 195 aa15.15■□□□□ 0.02
PNKP-203ENST00000593946 C9orf85Q96MD7 179 aa15.15■□□□□ 0.02
PNKP-203ENST00000593946 C1QTNF4Q9BXJ3 329 aa15.15■□□□□ 0.02
PNKP-203ENST00000593946 MDFICQ9P1T7 246 aa15.15■□□□□ 0.02
PNKP-203ENST00000593946 PHLDA3Q9Y5J5 127 aa15.15■□□□□ 0.02
PNKP-203ENST00000593946 CBY3A6NI87 242 aa15.14■□□□□ 0.01
PNKP-203ENST00000593946 SPANXN1Q5VSR9 72 aa15.14■□□□□ 0.01
PNKP-203ENST00000593946 LINC01587Q99440 93 aa15.14■□□□□ 0.01
PNKP-203ENST00000593946 NXPH4O95158 308 aa15.14■□□□□ 0.01
PNKP-203ENST00000593946 LINC00518Q8N0U6 118 aa15.14■□□□□ 0.01
PNKP-203ENST00000593946 SPRY2O43597 315 aa15.13■□□□□ 0.01
PNKP-203ENST00000593946 KIAA1644Q3SXP7 199 aa15.13■□□□□ 0.01
PNKP-203ENST00000593946 LURAP1LQ8IV03 231 aa15.13■□□□□ 0.01
PNKP-203ENST00000593946 CSNK1G2-AS1Q8NCQ2 148 aa15.13■□□□□ 0.01
PNKP-203ENST00000593946 TMEM191AQ9H0A3 160 aa15.13■□□□□ 0.01
PNKP-203ENST00000593946 HTN1P15515 57 aa15.12■□□□□ 0.01
PNKP-203ENST00000593946 KRTAP10-11P60412 298 aa15.12■□□□□ 0.01
PNKP-203ENST00000593946 TMEM208Q9BTX3 173 aa15.12■□□□□ 0.01
PNKP-203ENST00000593946 M0R381 172 aa15.12■□□□□ 0.01
PNKP-203ENST00000593946 PRM2P04554 102 aa15.12■□□□□ 0.01
PNKP-203ENST00000593946 DMRTA1Q5VZB9 504 aa15.12■□□□□ 0.01
PNKP-203ENST00000593946 CSTL1Q9H114 145 aa15.12■□□□□ 0.01
PNKP-203ENST00000593946 LOC102724200A0A096LPH7 203 aaPredicted RBP15.11■□□□□ 0.01
PNKP-203ENST00000593946 FAM104BQ5XKR9 115 aa15.1■□□□□ 0.01
PNKP-203ENST00000593946 GOLT1BQ9Y3E0 138 aa15.1■□□□□ 0.01
PNKP-203ENST00000593946 AMN1Q8IY45 258 aa15.09■□□□□ 0.01
PNKP-203ENST00000593946 ZMAT5Q9UDW3 170 aaKnown RBP15.09■□□□□ 0.01
PNKP-203ENST00000593946 IGHV3OR16-12A0A075B7B8 117 aa15.09■□□□□ 0.01
PNKP-203ENST00000593946 S100A6P06703 90 aa15.09■□□□□ 0.01
PNKP-203ENST00000593946 EVI2AP22794 236 aa15.09■□□□□ 0.01
PNKP-203ENST00000593946 S100A12P80511 92 aa15.09■□□□□ 0.01
PNKP-203ENST00000593946 C11orf72Q8NBR9 251 aa15.09■□□□□ 0.01
PNKP-203ENST00000593946 SRIP30626 198 aa15.08■□□□□ 0
PNKP-203ENST00000593946 ZNF415Q09FC8 603 aa15.08■□□□□ 0
PNKP-203ENST00000593946 ZNF705AQ6ZN79 300 aaPredicted RBP15.08■□□□□ 0
PNKP-203ENST00000593946 KIR2DL5BA0A0G2JN68 375 aa15.07■□□□□ 0
PNKP-203ENST00000593946 KIR2DL5BA0A0G2JPC4 375 aa15.07■□□□□ 0
PNKP-203ENST00000593946 G3V4G9 280 aa15.07■□□□□ 0
PNKP-203ENST00000593946 NDUFA6P56556 154 aa15.07■□□□□ 0
PNKP-203ENST00000593946 SMIM15Q7Z3B0 74 aa15.07■□□□□ 0
PNKP-203ENST00000593946 KIR2DL5AQ8N109 375 aa15.07■□□□□ 0
PNKP-203ENST00000593946 KIR2DL5BQ8NHK3 375 aa15.07■□□□□ 0
PNKP-203ENST00000593946 ALKBH7Q9BT30 221 aaPredicted RBP15.07■□□□□ 0
PNKP-203ENST00000593946 AZU1P20160 251 aa15.06■□□□□ 0
PNKP-203ENST00000593946 SAMD5Q5TGI4 173 aa15.06■□□□□ 0
PNKP-203ENST00000593946 RNF185Q96GF1 192 aa15.06■□□□□ 0
PNKP-203ENST00000593946 IGHV4-30-4P0DP06 118 aa15.06■□□□□ 0
PNKP-203ENST00000593946 MRPL51Q4U2R6 128 aaKnown RBP15.06■□□□□ 0
PNKP-203ENST00000593946 RNASE8Q8TDE3 154 aaKnown RBP15.06■□□□□ 0
PNKP-203ENST00000593946 AP1S3Q96PC3 154 aa15.06■□□□□ 0
PNKP-203ENST00000593946 GSN-AS1Q9NRJ2 163 aa15.06■□□□□ 0
PNKP-203ENST00000593946 C5orf52A6NGY3 159 aa15.05■□□□□ -0
PNKP-203ENST00000593946 RAB4AP20338 218 aa15.05■□□□□ -0
PNKP-203ENST00000593946 SNRPEP62304 92 aaKnown RBP15.05■□□□□ -0
PNKP-203ENST00000593946 COA6Q5JTJ3 125 aaKnown RBP15.05■□□□□ -0
PNKP-203ENST00000593946 SYT8Q8NBV8 401 aa15.05■□□□□ -0
PNKP-203ENST00000593946 NOTCH1P46531 2555 aa15.05■□□□□ -0
PNKP-203ENST00000593946 APOC4P55056 127 aa15.04■□□□□ -0
PNKP-203ENST00000593946 TMEM263Q8WUH6 116 aaKnown RBP15.04■□□□□ -0
PNKP-203ENST00000593946 RCHY1Q96PM5 261 aa15.04■□□□□ -0
PNKP-203ENST00000593946 NBEAL1Q6ZS30 2694 aa15.04■□□□□ -0
PNKP-203ENST00000593946 Q0VG73 95 aa15.03■□□□□ -0
PNKP-203ENST00000593946 U3KQK5 164 aa15.03■□□□□ -0
PNKP-203ENST00000593946 ZNF876PQ49A33 203 aa15.03■□□□□ -0
PNKP-203ENST00000593946 OR10J3Q5JRS4 329 aa15.03■□□□□ -0
PNKP-203ENST00000593946 C14orf178Q8N769 122 aaPredicted RBP15.03■□□□□ -0
PNKP-203ENST00000593946 IL17DQ8TAD2 202 aa15.03■□□□□ -0
PNKP-203ENST00000593946 C18orf32Q8TCD1 76 aa15.03■□□□□ -0
PNKP-203ENST00000593946 PTH2Q96A98 100 aa15.03■□□□□ -0
PNKP-203ENST00000593946 SPXQ9BT56 116 aa15.03■□□□□ -0
PNKP-203ENST00000593946 DPH3P1Q9H4G8 78 aa15.03■□□□□ -0
PNKP-203ENST00000593946 NACAE9PAV3 2078 aa15.02■□□□□ -0
PNKP-203ENST00000593946 D6R8Y8 96 aa15.02□□□□□ -0.01
PNKP-203ENST00000593946 M0R2P5 195 aa15.02□□□□□ -0.01
PNKP-203ENST00000593946 PIK3CD-AS1Q5SR53 167 aa15.02□□□□□ -0.01
PNKP-203ENST00000593946 JPT2Q9H910 190 aa15.02□□□□□ -0.01
PNKP-203ENST00000593946 KIF25-AS1Q9Y6Z4 181 aa15.02□□□□□ -0.01
PNKP-203ENST00000593946 NBEAL2Q6ZNJ1 2754 aa15.01□□□□□ -0.01
PNKP-203ENST00000593946 CTAG1AP78358 180 aa15.01□□□□□ -0.01
PNKP-203ENST00000593946 ORMDL3Q8N138 153 aa15□□□□□ -0.01
PNKP-203ENST00000593946 C16orf74Q96GX8 76 aa15□□□□□ -0.01
PNKP-203ENST00000593946 DNAH3Q8TD57 4116 aa15□□□□□ -0.01
PNKP-203ENST00000593946 MGAM2Q2M2H8 2515 aa15□□□□□ -0.01
PNKP-203ENST00000593946 A8MZ25 164 aa15□□□□□ -0.01
PNKP-203ENST00000593946 HOXA5P20719 270 aa15□□□□□ -0.01
PNKP-203ENST00000593946 RRN3P1Q2M238 152 aa15□□□□□ -0.01
PNKP-203ENST00000593946 UBE2CO00762 179 aa14.99□□□□□ -0.01
PNKP-203ENST00000593946 PPBPP02775 128 aa14.99□□□□□ -0.01
PNKP-203ENST00000593946 CKS2P33552 79 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 169 ms