RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 K7EQM0 130 aa9.95□□□□□ -0.82
PNKP-202ENST00000593706 PFN1P07737 140 aaKnown RBP9.95□□□□□ -0.82
PNKP-202ENST00000593706 HAMPP81172 84 aa9.95□□□□□ -0.82
PNKP-202ENST00000593706 NDFIP1Q9BT67 221 aa9.95□□□□□ -0.82
PNKP-202ENST00000593706 MAP1LC3BQ9GZQ8 125 aa9.95□□□□□ -0.82
PNKP-202ENST00000593706 SDF2L1Q9HCN8 221 aa9.95□□□□□ -0.82
PNKP-202ENST00000593706 IGLV5-52A0A0A0MRZ9 124 aa9.94□□□□□ -0.82
PNKP-202ENST00000593706 M0R2P5 195 aa9.94□□□□□ -0.82
PNKP-202ENST00000593706 PEX7O00628 323 aa9.94□□□□□ -0.82
PNKP-202ENST00000593706 GCGP01275 180 aa9.94□□□□□ -0.82
PNKP-202ENST00000593706 UBE2G2P60604 165 aa9.94□□□□□ -0.82
PNKP-202ENST00000593706 Q6ZSN1 163 aa9.94□□□□□ -0.82
PNKP-202ENST00000593706 PRNTQ86SH4 94 aa9.94□□□□□ -0.82
PNKP-202ENST00000593706 Q86TA4 180 aa9.94□□□□□ -0.82
PNKP-202ENST00000593706 NHLRC2Q8NBF2 726 aa9.94□□□□□ -0.82
PNKP-202ENST00000593706 KCNS1Q96KK3 526 aa9.94□□□□□ -0.82
PNKP-202ENST00000593706 TRAV4A0A0B4J268 109 aa9.93□□□□□ -0.82
PNKP-202ENST00000593706 TRAV34A0A0B4J273 112 aa9.93□□□□□ -0.82
PNKP-202ENST00000593706 BCL2L11O43521 198 aa9.93□□□□□ -0.82
PNKP-202ENST00000593706 SEC11BP0C7V7 166 aa9.93□□□□□ -0.82
PNKP-202ENST00000593706 PPT1P50897 306 aa9.93□□□□□ -0.82
PNKP-202ENST00000593706 SAPCD1Q5SSQ6 148 aa9.93□□□□□ -0.82
PNKP-202ENST00000593706 COX8CQ7Z4L0 72 aa9.93□□□□□ -0.82
PNKP-202ENST00000593706 OR4C5Q8NGB2 326 aa9.93□□□□□ -0.82
PNKP-202ENST00000593706 C9orf85Q96MD7 179 aa9.93□□□□□ -0.82
PNKP-202ENST00000593706 NKX6-2Q9C056 277 aaPredicted RBP9.93□□□□□ -0.82
PNKP-202ENST00000593706 ARL2-SNX15V9GYD0 113 aa9.93□□□□□ -0.82
PNKP-202ENST00000593706 A0A0D9SG52 128 aa9.92□□□□□ -0.82
PNKP-202ENST00000593706 RNASE3P12724 160 aaKnown RBP9.92□□□□□ -0.82
PNKP-202ENST00000593706 SMUG1Q53HV7 270 aa9.92□□□□□ -0.82
PNKP-202ENST00000593706 SH2D6Q7Z4S9 175 aa9.92□□□□□ -0.82
PNKP-202ENST00000593706 HIST1H2BAQ96A08 127 aa9.92□□□□□ -0.82
PNKP-202ENST00000593706 IGHV3-38A0A0C4DH36 116 aa9.91□□□□□ -0.82
PNKP-202ENST00000593706 LOC100131303A0A0U1RQF7 123 aa9.91□□□□□ -0.82
PNKP-202ENST00000593706 UMAD1C9J7I0 102 aa9.91□□□□□ -0.82
PNKP-202ENST00000593706 IFNA7P01567 189 aa9.91□□□□□ -0.82
PNKP-202ENST00000593706 NTN5Q8WTR8 489 aaPredicted RBP9.91□□□□□ -0.82
PNKP-202ENST00000593706 MBD3L1Q8WWY6 194 aa9.91□□□□□ -0.82
PNKP-202ENST00000593706 PTH2Q96A98 100 aa9.91□□□□□ -0.82
PNKP-202ENST00000593706 TCEAL7Q9BRU2 100 aa9.91□□□□□ -0.82
PNKP-202ENST00000593706 TMEM70Q9BUB7 260 aa9.91□□□□□ -0.82
PNKP-202ENST00000593706 Q9HAA7 133 aa9.91□□□□□ -0.82
PNKP-202ENST00000593706 DNAH8Q96JB1 4490 aa9.9□□□□□ -0.82
PNKP-202ENST00000593706 IGKV3D-20A0A0C4DH25 116 aa9.9□□□□□ -0.82
PNKP-202ENST00000593706 TRBV6-1A0A0K0K1D8 114 aa9.9□□□□□ -0.82
PNKP-202ENST00000593706 ZFP69Q49AA0 526 aa9.9□□□□□ -0.82
PNKP-202ENST00000593706 DPPA3Q6W0C5 159 aa9.9□□□□□ -0.82
PNKP-202ENST00000593706 ZNF471Q9BX82 626 aaPredicted RBP9.9□□□□□ -0.82
PNKP-202ENST00000593706 GATA1P15976 413 aaPredicted RBP9.89□□□□□ -0.83
PNKP-202ENST00000593706 CRIP1P50238 77 aa9.89□□□□□ -0.83
PNKP-202ENST00000593706 OR10J3Q5JRS4 329 aa9.89□□□□□ -0.83
PNKP-202ENST00000593706 TMUB2Q71RG4 321 aa9.89□□□□□ -0.83
PNKP-202ENST00000593706 STOML3Q8TAV4 291 aa9.89□□□□□ -0.83
PNKP-202ENST00000593706 FAM213BQ8TBF2 198 aa9.89□□□□□ -0.83
PNKP-202ENST00000593706 ZC2HC1AQ96GY0 325 aa9.89□□□□□ -0.83
PNKP-202ENST00000593706 hCG_2014768A0A024R1R8 64 aa9.88□□□□□ -0.83
PNKP-202ENST00000593706 TRAV8-6A0A0B4J262 113 aa9.88□□□□□ -0.83
PNKP-202ENST00000593706 KANTRA0A1W2PQU2 76 aa9.88□□□□□ -0.83
PNKP-202ENST00000593706 LTAP01374 205 aa9.88□□□□□ -0.83
PNKP-202ENST00000593706 ZNF876PQ49A33 203 aa9.88□□□□□ -0.83
PNKP-202ENST00000593706 LINC01556Q5JQF7 62 aa9.88□□□□□ -0.83
PNKP-202ENST00000593706 ZNF506Q5JVG8 444 aa9.88□□□□□ -0.83
PNKP-202ENST00000593706 CFAP126Q5VTH2 177 aa9.88□□□□□ -0.83
PNKP-202ENST00000593706 TCTE3Q8IZS6 198 aa9.88□□□□□ -0.83
PNKP-202ENST00000593706 FMC1Q96HJ9 113 aa9.88□□□□□ -0.83
PNKP-202ENST00000593706 LRCOL1A6NCL2 159 aa9.87□□□□□ -0.83
PNKP-202ENST00000593706 J3QL48 77 aa9.87□□□□□ -0.83
PNKP-202ENST00000593706 RS1O15537 224 aa9.87□□□□□ -0.83
PNKP-202ENST00000593706 TIRAPP58753 221 aa9.87□□□□□ -0.83
PNKP-202ENST00000593706 Q8N814 137 aa9.87□□□□□ -0.83
PNKP-202ENST00000593706 SFT2D1Q8WV19 159 aa9.87□□□□□ -0.83
PNKP-202ENST00000593706 ZFP30Q9Y2G7 519 aa9.87□□□□□ -0.83
PNKP-202ENST00000593706 BOLA1Q9Y3E2 137 aa9.87□□□□□ -0.83
PNKP-202ENST00000593706 PGPEP1LA6NFU8 196 aa9.86□□□□□ -0.83
PNKP-202ENST00000593706 FABP5P3A8MUU1 101 aa9.86□□□□□ -0.83
PNKP-202ENST00000593706 IBA57-AS1B1ANH7 110 aa9.86□□□□□ -0.83
PNKP-202ENST00000593706 PAGE4O60829 102 aa9.86□□□□□ -0.83
PNKP-202ENST00000593706 IGHV3-30P01768 117 aa9.86□□□□□ -0.83
PNKP-202ENST00000593706 IGHV3-33P01772 117 aa9.86□□□□□ -0.83
PNKP-202ENST00000593706 IGHV3-30-3P0DP02 117 aa9.86□□□□□ -0.83
PNKP-202ENST00000593706 IGHV3-30-5P0DP03 117 aa9.86□□□□□ -0.83
PNKP-202ENST00000593706 LGALSLQ3ZCW2 172 aaPredicted RBP9.86□□□□□ -0.83
PNKP-202ENST00000593706 PIK3CD-AS1Q5SR53 167 aa9.86□□□□□ -0.83
PNKP-202ENST00000593706 DNLZQ5SXM8 178 aa9.86□□□□□ -0.83
PNKP-202ENST00000593706 CST9LP1Q5W188 147 aa9.86□□□□□ -0.83
PNKP-202ENST00000593706 KRBOX1C9JBD0 128 aa9.85□□□□□ -0.83
PNKP-202ENST00000593706 SH2D1AO60880 128 aa9.85□□□□□ -0.83
PNKP-202ENST00000593706 TPT1P13693 172 aaKnown RBP9.85□□□□□ -0.83
PNKP-202ENST00000593706 EIF5AP63241 154 aaKnown RBP9.85□□□□□ -0.83
PNKP-202ENST00000593706 RHOHQ15669 191 aa9.85□□□□□ -0.83
PNKP-202ENST00000593706 ZNF674Q2M3X9 581 aa9.85□□□□□ -0.83
PNKP-202ENST00000593706 SLC25A29Q8N8R3 303 aa9.85□□□□□ -0.83
PNKP-202ENST00000593706 PRADC1Q9BSG0 188 aa9.85□□□□□ -0.83
PNKP-202ENST00000593706 IL36BQ9NZH7 164 aa9.85□□□□□ -0.83
PNKP-202ENST00000593706 TRAV1-1A0A0B4J248 108 aa9.84□□□□□ -0.83
PNKP-202ENST00000593706 A0A1B0GVG6 124 aa9.84□□□□□ -0.83
PNKP-202ENST00000593706 CIDEAO60543 219 aa9.84□□□□□ -0.83
PNKP-202ENST00000593706 PFDN1O60925 122 aa9.84□□□□□ -0.83
PNKP-202ENST00000593706 FAM162BQ5T6X4 162 aa9.84□□□□□ -0.83
PNKP-202ENST00000593706 UFSP1Q6NVU6 142 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms