RNA–Protein interactions for RNA: ENST00000593504.5

SYMPK-202, Transcript of symplekin, humanhuman

TSL 2

Gene SYMPK, Length 5,107 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-202ENST00000593504 GAGE12HA6NDE8 117 aa11.73□□□□□ -0.53
SYMPK-202ENST00000593504 A0A0U1RRA0 63 aa11.73□□□□□ -0.53
SYMPK-202ENST00000593504 TRBV12-3P01733 135 aa11.73□□□□□ -0.53
SYMPK-202ENST00000593504 C1orf159Q96HA4 380 aa11.73□□□□□ -0.53
SYMPK-202ENST00000593504 I3L3M4 83 aa11.73□□□□□ -0.53
SYMPK-202ENST00000593504 DEFB130BP0DP73 79 aa11.73□□□□□ -0.53
SYMPK-202ENST00000593504 DEFB130AP0DP74 79 aa11.73□□□□□ -0.53
SYMPK-202ENST00000593504 CFAP161Q6P656 301 aa11.73□□□□□ -0.53
SYMPK-202ENST00000593504 CCDC140Q96MF4 163 aa11.73□□□□□ -0.53
SYMPK-202ENST00000593504 IGLV2-8P01709 118 aa11.73□□□□□ -0.53
SYMPK-202ENST00000593504 PGPEP1Q9NXJ5 209 aa11.73□□□□□ -0.53
SYMPK-202ENST00000593504 GATA1P15976 413 aaPredicted RBP11.72□□□□□ -0.53
SYMPK-202ENST00000593504 ADAMTS20P59510 1910 aa11.72□□□□□ -0.53
SYMPK-202ENST00000593504 TRBV6-1A0A0K0K1D8 114 aa11.72□□□□□ -0.53
SYMPK-202ENST00000593504 UNQ9165/PRO28630Q6UXU0 137 aa11.72□□□□□ -0.53
SYMPK-202ENST00000593504 IGHV4OR15-8A0A075B7B6 117 aa11.72□□□□□ -0.53
SYMPK-202ENST00000593504 A0A087WW49 117 aa11.72□□□□□ -0.53
SYMPK-202ENST00000593504 HCFC1P51610 2035 aa11.72□□□□□ -0.53
SYMPK-202ENST00000593504 C20orf78Q9BR46 151 aa11.72□□□□□ -0.53
SYMPK-202ENST00000593504 C19orf71A6NCJ1 209 aa11.71□□□□□ -0.53
SYMPK-202ENST00000593504 AZU1P20160 251 aa11.71□□□□□ -0.53
SYMPK-202ENST00000593504 EBI3Q14213 229 aa11.71□□□□□ -0.53
SYMPK-202ENST00000593504 PPDPFLQ8WWR9 84 aa11.71□□□□□ -0.53
SYMPK-202ENST00000593504 TMEM141Q96I45 108 aa11.71□□□□□ -0.53
SYMPK-202ENST00000593504 ZNF747Q9BV97 191 aa11.71□□□□□ -0.53
SYMPK-202ENST00000593504 TNFRSF13BO14836 293 aaPredicted RBP11.71□□□□□ -0.53
SYMPK-202ENST00000593504 MALP21145 153 aa11.71□□□□□ -0.53
SYMPK-202ENST00000593504 CFHR3Q02985 330 aa11.71□□□□□ -0.53
SYMPK-202ENST00000593504 RBMY1BA6NDE4 496 aaKnown RBP11.71□□□□□ -0.54
SYMPK-202ENST00000593504 RBMY1EA6NEQ0 496 aaKnown RBP11.71□□□□□ -0.54
SYMPK-202ENST00000593504 CCL24O00175 119 aa11.71□□□□□ -0.54
SYMPK-202ENST00000593504 RBMY1DP0C7P1 496 aaKnown RBP11.71□□□□□ -0.54
SYMPK-202ENST00000593504 RBMY1A1P0DJD3 496 aaKnown RBP11.71□□□□□ -0.54
SYMPK-202ENST00000593504 RBMY1CP0DJD4 496 aa11.71□□□□□ -0.54
SYMPK-202ENST00000593504 PLXNB1O43157 2135 aa11.71□□□□□ -0.54
SYMPK-202ENST00000593504 CEP295Q9C0D2 2601 aa11.71□□□□□ -0.54
SYMPK-202ENST00000593504 CSPG4Q6UVK1 2322 aa11.71□□□□□ -0.54
SYMPK-202ENST00000593504 C9orf47Q6ZRZ4 202 aa11.71□□□□□ -0.54
SYMPK-202ENST00000593504 GHRHP01286 108 aa11.7□□□□□ -0.54
SYMPK-202ENST00000593504 COX8AP10176 69 aa11.7□□□□□ -0.54
SYMPK-202ENST00000593504 C2orf82Q6UX34 121 aa11.7□□□□□ -0.54
SYMPK-202ENST00000593504 SPXQ9BT56 116 aa11.7□□□□□ -0.54
SYMPK-202ENST00000593504 K7EMT4 169 aa11.7□□□□□ -0.54
SYMPK-202ENST00000593504 M0R2P5 195 aa11.7□□□□□ -0.54
SYMPK-202ENST00000593504 PMVKQ15126 192 aa11.7□□□□□ -0.54
SYMPK-202ENST00000593504 MRPL35Q9NZE8 188 aaKnown RBP11.7□□□□□ -0.54
SYMPK-202ENST00000593504 TRBV7-9A0A0J9YWB2 115 aa11.7□□□□□ -0.54
SYMPK-202ENST00000593504 BVES-AS1Q5T3Y7 98 aa11.7□□□□□ -0.54
SYMPK-202ENST00000593504 CHD7Q9P2D1 2997 aa11.69□□□□□ -0.54
SYMPK-202ENST00000593504 TRBV20-1A0A075B6N2 111 aa11.69□□□□□ -0.54
SYMPK-202ENST00000593504 A0A1W2PPM0 123 aa11.69□□□□□ -0.54
SYMPK-202ENST00000593504 GPHB5Q86YW7 130 aa11.69□□□□□ -0.54
SYMPK-202ENST00000593504 TRAV13-1A0A0B4J241 112 aa11.69□□□□□ -0.54
SYMPK-202ENST00000593504 GAGE12JA6NER3 117 aa11.69□□□□□ -0.54
SYMPK-202ENST00000593504 DEFB1P60022 68 aa11.69□□□□□ -0.54
SYMPK-202ENST00000593504 GAGE4Q13068 117 aa11.69□□□□□ -0.54
SYMPK-202ENST00000593504 GAGE5Q13069 117 aa11.69□□□□□ -0.54
SYMPK-202ENST00000593504 TIMM21Q9BVV7 248 aa11.69□□□□□ -0.54
SYMPK-202ENST00000593504 CCL25O15444 150 aa11.69□□□□□ -0.54
SYMPK-202ENST00000593504 LOXL1Q08397 574 aaPredicted RBP11.68□□□□□ -0.54
SYMPK-202ENST00000593504 C9orf153Q5TBE3 101 aa11.68□□□□□ -0.54
SYMPK-202ENST00000593504 LINC00322Q6ZN03 302 aaPredicted RBP11.68□□□□□ -0.54
SYMPK-202ENST00000593504 DKK2Q9UBU2 259 aa11.68□□□□□ -0.54
SYMPK-202ENST00000593504 A0A087WX48 190 aa11.68□□□□□ -0.54
SYMPK-202ENST00000593504 TMEM89A2RUT3 159 aa11.68□□□□□ -0.54
SYMPK-202ENST00000593504 NPC2P61916 151 aa11.68□□□□□ -0.54
SYMPK-202ENST00000593504 MORN3Q6PF18 240 aaPredicted RBP11.68□□□□□ -0.54
SYMPK-202ENST00000593504 APRG1Q8IVJ8 170 aa11.68□□□□□ -0.54
SYMPK-202ENST00000593504 SPANXCQ9NY87 97 aa11.68□□□□□ -0.54
SYMPK-202ENST00000593504 IGHV3-38A0A0C4DH36 116 aa11.67□□□□□ -0.54
SYMPK-202ENST00000593504 GAGE7O76087 117 aa11.67□□□□□ -0.54
SYMPK-202ENST00000593504 GAGE12FP0CL80 117 aa11.67□□□□□ -0.54
SYMPK-202ENST00000593504 GAGE12GP0CL81 117 aa11.67□□□□□ -0.54
SYMPK-202ENST00000593504 GAGE12IP0CL82 117 aa11.67□□□□□ -0.54
SYMPK-202ENST00000593504 RASL10AQ92737 203 aa11.67□□□□□ -0.54
SYMPK-202ENST00000593504 C2orf70A6NJV1 201 aa11.67□□□□□ -0.54
SYMPK-202ENST00000593504 ETDBQ3ZM63 59 aa11.67□□□□□ -0.54
SYMPK-202ENST00000593504 LINC00173Q6ZV60 143 aa11.67□□□□□ -0.54
SYMPK-202ENST00000593504 SRSF2Q01130 221 aaKnown RBP11.67□□□□□ -0.54
SYMPK-202ENST00000593504 ZNRF2Q8NHG8 242 aa11.67□□□□□ -0.54
SYMPK-202ENST00000593504 EDA2RQ9HAV5 297 aa11.67□□□□□ -0.54
SYMPK-202ENST00000593504 ZNF493Q6ZR52 646 aa11.66□□□□□ -0.54
SYMPK-202ENST00000593504 NOTCH2Q04721 2471 aa11.66□□□□□ -0.54
SYMPK-202ENST00000593504 SIVA1O15304 175 aa11.66□□□□□ -0.54
SYMPK-202ENST00000593504 IFITM1P13164 125 aa11.66□□□□□ -0.54
SYMPK-202ENST00000593504 HLA-DRB4P13762 266 aa11.66□□□□□ -0.54
SYMPK-202ENST00000593504 HLA-DRB4X5D2U9 266 aa11.66□□□□□ -0.54
SYMPK-202ENST00000593504 F8VRH5 84 aa11.66□□□□□ -0.54
SYMPK-202ENST00000593504 IGF1P05019 195 aa11.65□□□□□ -0.54
SYMPK-202ENST00000593504 CTRLP40313 264 aa11.65□□□□□ -0.54
SYMPK-202ENST00000593504 MLST8Q9BVC4 326 aa11.65□□□□□ -0.54
SYMPK-202ENST00000593504 S100A7L2Q5SY68 101 aa11.65□□□□□ -0.54
SYMPK-202ENST00000593504 DEFB125Q8N687 156 aa11.65□□□□□ -0.55
SYMPK-202ENST00000593504 RPL39LQ96EH5 51 aaKnown RBP11.65□□□□□ -0.55
SYMPK-202ENST00000593504 LINC00158P58513 81 aa11.64□□□□□ -0.55
SYMPK-202ENST00000593504 C3orf56Q8N813 242 aa11.64□□□□□ -0.55
SYMPK-202ENST00000593504 C9JAW5 83 aa11.64□□□□□ -0.55
SYMPK-202ENST00000593504 CRPP02741 224 aa11.64□□□□□ -0.55
SYMPK-202ENST00000593504 YPEL4Q96NS1 127 aa11.64□□□□□ -0.55
SYMPK-202ENST00000593504 RNASE8Q8TDE3 154 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms