RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 RNF212Q495C1 297 aa6.85□□□□□ -1.31
DDX39A-220ENST00000593008 CEMP1Q6PRD7 247 aaPredicted RBP6.85□□□□□ -1.31
DDX39A-220ENST00000593008 ATRAIDQ6UW56 229 aa6.85□□□□□ -1.31
DDX39A-220ENST00000593008 FAM231DQ6ZW35 169 aa6.85□□□□□ -1.31
DDX39A-220ENST00000593008 PHLDA1Q8WV24 401 aaPredicted RBP6.85□□□□□ -1.31
DDX39A-220ENST00000593008 DAZAP1Q96EP5 407 aaKnown RBP6.85□□□□□ -1.31
DDX39A-220ENST00000593008 C16orf74Q96GX8 76 aa6.85□□□□□ -1.31
DDX39A-220ENST00000593008 KCNS1Q96KK3 526 aa6.85□□□□□ -1.31
DDX39A-220ENST00000593008 JPT2Q9H910 190 aa6.85□□□□□ -1.31
DDX39A-220ENST00000593008 DKK2Q9UBU2 259 aa6.85□□□□□ -1.31
DDX39A-220ENST00000593008 MUC4Q99102 2169 aa6.85□□□□□ -1.31
DDX39A-220ENST00000593008 RYR2Q92736 4967 aa6.85□□□□□ -1.31
DDX39A-220ENST00000593008 TRGV1A0A0A0MS02 117 aa6.84□□□□□ -1.31
DDX39A-220ENST00000593008 NUPR2A6NF83 97 aa6.84□□□□□ -1.31
DDX39A-220ENST00000593008 IGHV3-53P01767 116 aa6.84□□□□□ -1.31
DDX39A-220ENST00000593008 APOC3P02656 99 aa6.84□□□□□ -1.31
DDX39A-220ENST00000593008 DEFB130BP0DP73 79 aa6.84□□□□□ -1.31
DDX39A-220ENST00000593008 DEFB130AP0DP74 79 aa6.84□□□□□ -1.31
DDX39A-220ENST00000593008 C12orf74Q32Q52 190 aa6.84□□□□□ -1.31
DDX39A-220ENST00000593008 OR10G8Q8NGN5 311 aa6.84□□□□□ -1.31
DDX39A-220ENST00000593008 OSTCQ9NRP0 149 aa6.84□□□□□ -1.31
DDX39A-220ENST00000593008 DNAH1Q9P2D7 4330 aa6.84□□□□□ -1.31
DDX39A-220ENST00000593008 SACSQ9NZJ4 4579 aa6.84□□□□□ -1.32
DDX39A-220ENST00000593008 SNURFLB1AK76 121 aa6.83□□□□□ -1.32
DDX39A-220ENST00000593008 M0R381 172 aa6.83□□□□□ -1.32
DDX39A-220ENST00000593008 SPINK4O60575 86 aa6.83□□□□□ -1.32
DDX39A-220ENST00000593008 SPART-AS1P0CW21 52 aa6.83□□□□□ -1.32
DDX39A-220ENST00000593008 S100A4P26447 101 aaKnown RBP6.83□□□□□ -1.32
DDX39A-220ENST00000593008 DMRTA1Q5VZB9 504 aa6.83□□□□□ -1.32
DDX39A-220ENST00000593008 Q6ZTC4 211 aa6.83□□□□□ -1.32
DDX39A-220ENST00000593008 CLRN3Q8NCR9 226 aa6.83□□□□□ -1.32
DDX39A-220ENST00000593008 PGLYRP4Q96LB8 373 aa6.83□□□□□ -1.32
DDX39A-220ENST00000593008 SCRT2Q9NQ03 307 aa6.83□□□□□ -1.32
DDX39A-220ENST00000593008 MSRB1Q9NZV6 116 aa6.83□□□□□ -1.32
DDX39A-220ENST00000593008 ALMS1Q8TCU4 4167 aa6.83□□□□□ -1.32
DDX39A-220ENST00000593008 IGHV3-73A0A0B4J1V6 119 aa6.82□□□□□ -1.32
DDX39A-220ENST00000593008 DAZ2Q13117 558 aaKnown RBP6.82□□□□□ -1.32
DDX39A-220ENST00000593008 LYZL1Q6UWQ5 148 aa6.82□□□□□ -1.32
DDX39A-220ENST00000593008 LINC00612Q8N6U2 182 aa6.82□□□□□ -1.32
DDX39A-220ENST00000593008 POM121L12Q8N7R1 296 aa6.82□□□□□ -1.32
DDX39A-220ENST00000593008 FER1L6-AS1Q8NA97 138 aa6.82□□□□□ -1.32
DDX39A-220ENST00000593008 SAMD10Q9BYL1 202 aa6.82□□□□□ -1.32
DDX39A-220ENST00000593008 KLK5Q9Y337 293 aaPredicted RBP6.82□□□□□ -1.32
DDX39A-220ENST00000593008 VPS13DQ5THJ4 4388 aa6.81□□□□□ -1.32
DDX39A-220ENST00000593008 C7orf77A4D0Y5 90 aa6.81□□□□□ -1.32
DDX39A-220ENST00000593008 SNAI2O43623 268 aa6.81□□□□□ -1.32
DDX39A-220ENST00000593008 LY6G6CO95867 125 aa6.81□□□□□ -1.32
DDX39A-220ENST00000593008 HTN3P15516 51 aa6.81□□□□□ -1.32
DDX39A-220ENST00000593008 HOXA5P20719 270 aa6.81□□□□□ -1.32
DDX39A-220ENST00000593008 CTRLP40313 264 aa6.81□□□□□ -1.32
DDX39A-220ENST00000593008 FOXA3P55318 350 aaPredicted RBP6.81□□□□□ -1.32
DDX39A-220ENST00000593008 PNRC1Q12796 327 aaPredicted RBP6.81□□□□□ -1.32
DDX39A-220ENST00000593008 ZNF876PQ49A33 203 aa6.81□□□□□ -1.32
DDX39A-220ENST00000593008 DNLZQ5SXM8 178 aa6.81□□□□□ -1.32
DDX39A-220ENST00000593008 C15orf54Q8N8G6 183 aa6.81□□□□□ -1.32
DDX39A-220ENST00000593008 IL36BQ9NZH7 164 aa6.81□□□□□ -1.32
DDX39A-220ENST00000593008 A0A087WWL8 130 aa6.8□□□□□ -1.32
DDX39A-220ENST00000593008 LYRM9A8MSI8 78 aa6.8□□□□□ -1.32
DDX39A-220ENST00000593008 HIGD1CA8MV81 97 aa6.8□□□□□ -1.32
DDX39A-220ENST00000593008 M0R2P5 195 aa6.8□□□□□ -1.32
DDX39A-220ENST00000593008 ATP6V1G1O75348 118 aa6.8□□□□□ -1.32
DDX39A-220ENST00000593008 NXPH4O95158 308 aa6.8□□□□□ -1.32
DDX39A-220ENST00000593008 CXCL1P09341 107 aa6.8□□□□□ -1.32
DDX39A-220ENST00000593008 FAM3BP58499 235 aaPredicted RBP6.8□□□□□ -1.32
DDX39A-220ENST00000593008 RPS20P60866 119 aaKnown RBP6.8□□□□□ -1.32
DDX39A-220ENST00000593008 NDUFA5Q16718 116 aa6.8□□□□□ -1.32
DDX39A-220ENST00000593008 CT83Q5H943 113 aa6.8□□□□□ -1.32
DDX39A-220ENST00000593008 NUP35Q8NFH5 326 aa6.8□□□□□ -1.32
DDX39A-220ENST00000593008 TSKUQ8WUA8 353 aa6.8□□□□□ -1.32
DDX39A-220ENST00000593008 LINC00476Q8WZB0 136 aa6.8□□□□□ -1.32
DDX39A-220ENST00000593008 ZNF479Q96JC4 524 aa6.8□□□□□ -1.32
DDX39A-220ENST00000593008 SPXQ9BT56 116 aa6.8□□□□□ -1.32
DDX39A-220ENST00000593008 SSBP4Q9BWG4 385 aaPredicted RBP6.8□□□□□ -1.32
DDX39A-220ENST00000593008 PHLDA3Q9Y5J5 127 aa6.8□□□□□ -1.32
DDX39A-220ENST00000593008 NACAE9PAV3 2078 aa6.8□□□□□ -1.32
DDX39A-220ENST00000593008 SMIM27A0A1W2PRY6 76 aa6.79□□□□□ -1.32
DDX39A-220ENST00000593008 XKRY2A2RUG3 117 aa6.79□□□□□ -1.32
DDX39A-220ENST00000593008 IGLL5B9A064 214 aa6.79□□□□□ -1.32
DDX39A-220ENST00000593008 CIDEAO60543 219 aa6.79□□□□□ -1.32
DDX39A-220ENST00000593008 SCO1O75880 301 aa6.79□□□□□ -1.32
DDX39A-220ENST00000593008 TCTAP57738 103 aa6.79□□□□□ -1.32
DDX39A-220ENST00000593008 DAD1P61803 113 aa6.79□□□□□ -1.32
DDX39A-220ENST00000593008 Q6ZSN1 163 aa6.79□□□□□ -1.32
DDX39A-220ENST00000593008 RPS10P5Q9NQ39 176 aa6.79□□□□□ -1.32
DDX39A-220ENST00000593008 HYDINQ4G0P3 5121 aa6.78□□□□□ -1.32
DDX39A-220ENST00000593008 TRGV2A0A075B6R0 118 aa6.78□□□□□ -1.32
DDX39A-220ENST00000593008 A8MWL6 223 aa6.78□□□□□ -1.32
DDX39A-220ENST00000593008 RS1O15537 224 aa6.78□□□□□ -1.32
DDX39A-220ENST00000593008 MT-ND4LP03901 98 aa6.78□□□□□ -1.32
DDX39A-220ENST00000593008 OR5AL1P0C617 328 aa6.78□□□□□ -1.32
DDX39A-220ENST00000593008 MED14OSP0DP75 135 aa6.78□□□□□ -1.32
DDX39A-220ENST00000593008 FAM74A4Q5TZK3 123 aa6.78□□□□□ -1.32
DDX39A-220ENST00000593008 CFAP126Q5VTH2 177 aa6.78□□□□□ -1.32
DDX39A-220ENST00000593008 MRPL54Q6P161 138 aaKnown RBP6.78□□□□□ -1.32
DDX39A-220ENST00000593008 CBLN2Q8IUK8 224 aa6.78□□□□□ -1.32
DDX39A-220ENST00000593008 RASL10AQ92737 203 aa6.78□□□□□ -1.32
DDX39A-220ENST00000593008 NDUFAF3Q9BU61 184 aa6.78□□□□□ -1.32
DDX39A-220ENST00000593008 Q9UF83 564 aa6.78□□□□□ -1.32
DDX39A-220ENST00000593008 URGCP-MRPS24S4R325 110 aa6.78□□□□□ -1.32
DDX39A-220ENST00000593008 TRAV10A0A0B4J240 114 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms