RNA–Protein interactions for RNA: ENST00000592923.5

CNN1-210, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-210ENST00000592923 OR2K2Q8NGT1 345 aa11.72□□□□□ -0.53
CNN1-210ENST00000592923 PEMTQ9UBM1 199 aa11.72□□□□□ -0.53
CNN1-210ENST00000592923 PHLDA3Q9Y5J5 127 aa11.72□□□□□ -0.53
CNN1-210ENST00000592923 TIMM8BQ9Y5J9 83 aaPredicted RBP11.72□□□□□ -0.53
CNN1-210ENST00000592923 C7orf71A4D174 169 aa11.72□□□□□ -0.53
CNN1-210ENST00000592923 HINT1P49773 126 aaPredicted RBP11.72□□□□□ -0.53
CNN1-210ENST00000592923 NRACQ8N912 160 aa11.72□□□□□ -0.53
CNN1-210ENST00000592923 TRAV2A0A0B4J234 112 aa11.71□□□□□ -0.54
CNN1-210ENST00000592923 PRSS47A8MTI9 375 aa11.71□□□□□ -0.54
CNN1-210ENST00000592923 M0R381 172 aa11.71□□□□□ -0.54
CNN1-210ENST00000592923 CCL25O15444 150 aa11.71□□□□□ -0.54
CNN1-210ENST00000592923 DUSP14O95147 198 aaKnown RBP11.71□□□□□ -0.54
CNN1-210ENST00000592923 RNASE3P12724 160 aaKnown RBP11.71□□□□□ -0.54
CNN1-210ENST00000592923 GATA1P15976 413 aaPredicted RBP11.71□□□□□ -0.54
CNN1-210ENST00000592923 FOXI2Q6ZQN5 318 aa11.71□□□□□ -0.54
CNN1-210ENST00000592923 OR11H1Q8NG94 326 aa11.71□□□□□ -0.54
CNN1-210ENST00000592923 WFDC12Q8WWY7 111 aa11.71□□□□□ -0.54
CNN1-210ENST00000592923 DPF1Q92782 380 aa11.71□□□□□ -0.54
CNN1-210ENST00000592923 FLNAP21333 2647 aaKnown RBP11.71□□□□□ -0.54
CNN1-210ENST00000592923 KHDC1LQ5JSQ8 128 aa11.7□□□□□ -0.54
CNN1-210ENST00000592923 FAM159AQ6UWV7 190 aa11.7□□□□□ -0.54
CNN1-210ENST00000592923 Q8N8P6 123 aa11.7□□□□□ -0.54
CNN1-210ENST00000592923 OR9G4Q8NGQ1 327 aa11.7□□□□□ -0.54
CNN1-210ENST00000592923 OR1N2Q8NGR9 330 aa11.7□□□□□ -0.54
CNN1-210ENST00000592923 AP1S3Q96PC3 154 aa11.7□□□□□ -0.54
CNN1-210ENST00000592923 PMCHL2Q9BQD1 86 aa11.7□□□□□ -0.54
CNN1-210ENST00000592923 DPH3P1Q9H4G8 78 aa11.7□□□□□ -0.54
CNN1-210ENST00000592923 ESM1Q9NQ30 184 aa11.7□□□□□ -0.54
CNN1-210ENST00000592923 TLN2Q9Y4G6 2542 aa11.7□□□□□ -0.54
CNN1-210ENST00000592923 CCDC168Q8NDH2 2452 aa11.7□□□□□ -0.54
CNN1-210ENST00000592923 IGLV2-18A0A075B6J9 118 aa11.7□□□□□ -0.54
CNN1-210ENST00000592923 HSBP1L1C9JCN9 74 aa11.7□□□□□ -0.54
CNN1-210ENST00000592923 GNRH2O43555 120 aa11.7□□□□□ -0.54
CNN1-210ENST00000592923 PCP4P48539 62 aa11.7□□□□□ -0.54
CNN1-210ENST00000592923 C12orf54Q6X4T0 127 aa11.7□□□□□ -0.54
CNN1-210ENST00000592923 KLHL30-AS1Q8NEE0 82 aa11.7□□□□□ -0.54
CNN1-210ENST00000592923 CDKN1BP46527 198 aa11.69□□□□□ -0.54
CNN1-210ENST00000592923 TRAV26-2A0A0B4J265 109 aa11.68□□□□□ -0.54
CNN1-210ENST00000592923 H0Y8G0 127 aa11.68□□□□□ -0.54
CNN1-210ENST00000592923 SLC25A34Q6PIV7 304 aa11.68□□□□□ -0.54
CNN1-210ENST00000592923 YAE1D1Q9NRH1 226 aa11.68□□□□□ -0.54
CNN1-210ENST00000592923 MYO9AB2RTY4 2548 aa11.68□□□□□ -0.54
CNN1-210ENST00000592923 PDZD2O15018 2839 aa11.68□□□□□ -0.54
CNN1-210ENST00000592923 TRAV12-3A0A0B4J271 114 aa11.67□□□□□ -0.54
CNN1-210ENST00000592923 FCER1GP30273 86 aa11.67□□□□□ -0.54
CNN1-210ENST00000592923 SCGB2A2Q13296 93 aa11.67□□□□□ -0.54
CNN1-210ENST00000592923 RBX1P62877 108 aa11.67□□□□□ -0.54
CNN1-210ENST00000592923 LGALS9BQ3B8N2 356 aa11.67□□□□□ -0.54
CNN1-210ENST00000592923 ANKRD39Q53RE8 183 aa11.67□□□□□ -0.54
CNN1-210ENST00000592923 LGALS9CQ6DKI2 356 aa11.67□□□□□ -0.54
CNN1-210ENST00000592923 IFI27L1Q96BM0 104 aa11.67□□□□□ -0.54
CNN1-210ENST00000592923 FXYD7P58549 80 aa11.66□□□□□ -0.54
CNN1-210ENST00000592923 AMTNQ6UX39 209 aa11.66□□□□□ -0.54
CNN1-210ENST00000592923 POM121L12Q8N7R1 296 aa11.66□□□□□ -0.54
CNN1-210ENST00000592923 SONP18583 2426 aaKnown RBP11.66□□□□□ -0.54
CNN1-210ENST00000592923 AKAP9Q99996 3911 aa11.66□□□□□ -0.54
CNN1-210ENST00000592923 HELZ2Q9BYK8 2649 aaKnown RBP11.66□□□□□ -0.54
CNN1-210ENST00000592923 hDV102S1A0JD36 115 aa11.65□□□□□ -0.54
CNN1-210ENST00000592923 A8MTW9 85 aa11.65□□□□□ -0.54
CNN1-210ENST00000592923 IGKV3-20P01619 116 aa11.65□□□□□ -0.54
CNN1-210ENST00000592923 RNASE1P07998 156 aaKnown RBP11.65□□□□□ -0.54
CNN1-210ENST00000592923 C14orf178Q8N769 122 aaPredicted RBP11.65□□□□□ -0.54
CNN1-210ENST00000592923 OR4C5Q8NGB2 326 aa11.65□□□□□ -0.54
CNN1-210ENST00000592923 DLX4Q92988 240 aaPredicted RBP11.65□□□□□ -0.54
CNN1-210ENST00000592923 DUX3Q96PT4 197 aa11.65□□□□□ -0.54
CNN1-210ENST00000592923 MCRIP2Q9BUT9 160 aaKnown RBP11.65□□□□□ -0.54
CNN1-210ENST00000592923 SPRY2O43597 315 aa11.65□□□□□ -0.55
CNN1-210ENST00000592923 CD7P09564 240 aa11.65□□□□□ -0.55
CNN1-210ENST00000592923 SPINK13Q1W4C9 94 aa11.65□□□□□ -0.55
CNN1-210ENST00000592923 DYNLRB2Q8TF09 96 aa11.65□□□□□ -0.55
CNN1-210ENST00000592923 C9orf85Q96MD7 179 aa11.65□□□□□ -0.55
CNN1-210ENST00000592923 SMIM2Q9BVW6 85 aa11.65□□□□□ -0.55
CNN1-210ENST00000592923 IGHV3-16A0A0C4DH30 117 aa11.64□□□□□ -0.55
CNN1-210ENST00000592923 HLA-DRB4P13762 266 aa11.64□□□□□ -0.55
CNN1-210ENST00000592923 FHL3Q13643 280 aa11.64□□□□□ -0.55
CNN1-210ENST00000592923 BVES-AS1Q5T3Y7 98 aa11.64□□□□□ -0.55
CNN1-210ENST00000592923 TMEM61Q8N0U2 210 aa11.64□□□□□ -0.55
CNN1-210ENST00000592923 RASL10AQ92737 203 aa11.64□□□□□ -0.55
CNN1-210ENST00000592923 C20orf78Q9BR46 151 aa11.64□□□□□ -0.55
CNN1-210ENST00000592923 HLA-DRB4X5D2U9 266 aa11.64□□□□□ -0.55
CNN1-210ENST00000592923 TRAV12-2A0A075B6T6 113 aa11.63□□□□□ -0.55
CNN1-210ENST00000592923 IGHV1OR15-1A0A075B7D0 117 aa11.63□□□□□ -0.55
CNN1-210ENST00000592923 MGPP08493 103 aa11.63□□□□□ -0.55
CNN1-210ENST00000592923 LAGE3Q14657 143 aa11.63□□□□□ -0.55
CNN1-210ENST00000592923 TMEM158Q8WZ71 300 aa11.63□□□□□ -0.55
CNN1-210ENST00000592923 C16orf95Q9H693 158 aa11.63□□□□□ -0.55
CNN1-210ENST00000592923 UNC79Q9P2D8 2635 aa11.63□□□□□ -0.55
CNN1-210ENST00000592923 PPP1R17O96001 155 aa11.63□□□□□ -0.55
CNN1-210ENST00000592923 RNASE8Q8TDE3 154 aaKnown RBP11.63□□□□□ -0.55
CNN1-210ENST00000592923 RAX2Q96IS3 184 aa11.63□□□□□ -0.55
CNN1-210ENST00000592923 TMEM160Q9NX00 188 aa11.63□□□□□ -0.55
CNN1-210ENST00000592923 KIF25-AS1Q9Y6Z4 181 aa11.63□□□□□ -0.55
CNN1-210ENST00000592923 MUC4Q99102 2169 aa11.62□□□□□ -0.55
CNN1-210ENST00000592923 TAX1BP3O14907 124 aa11.62□□□□□ -0.55
CNN1-210ENST00000592923 DEFB131AP59861 70 aa11.62□□□□□ -0.55
CNN1-210ENST00000592923 SUMO2P61956 95 aaKnown RBP11.62□□□□□ -0.55
CNN1-210ENST00000592923 VAMP3Q15836 100 aa11.62□□□□□ -0.55
CNN1-210ENST00000592923 K7EMI3 77 aa11.61□□□□□ -0.55
CNN1-210ENST00000592923 SMIM17P0DL12 118 aa11.61□□□□□ -0.55
CNN1-210ENST00000592923 DEFB114Q30KQ6 69 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms