RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 MRPS24Q96EL2 167 aaKnown RBP4.11□□□□□ -1.75
VMP1-215ENST00000592619 HIST1H2BNQ99877 126 aa4.11□□□□□ -1.75
VMP1-215ENST00000592619 HIST1H2BMQ99879 126 aa4.11□□□□□ -1.75
VMP1-215ENST00000592619 CHAC1Q9BUX1 264 aa4.11□□□□□ -1.75
VMP1-215ENST00000592619 TMEM106BQ9NUM4 274 aa4.11□□□□□ -1.75
VMP1-215ENST00000592619 C21orf62Q9NYP8 219 aa4.11□□□□□ -1.75
VMP1-215ENST00000592619 ZNF835Q9Y2P0 537 aa4.11□□□□□ -1.75
VMP1-215ENST00000592619 SHANK1Q9Y566 2161 aa4.11□□□□□ -1.75
VMP1-215ENST00000592619 EML6Q6ZMW3 1958 aa4.11□□□□□ -1.75
VMP1-215ENST00000592619 PRRC2CQ9Y520 2896 aaKnown RBP4.1□□□□□ -1.75
VMP1-215ENST00000592619 TRGV5A0A0B4J1U4 118 aa4.1□□□□□ -1.75
VMP1-215ENST00000592619 IGHV3-66A0A0C4DH42 116 aa4.1□□□□□ -1.75
VMP1-215ENST00000592619 M0R2P5 195 aa4.1□□□□□ -1.75
VMP1-215ENST00000592619 CD7P09564 240 aa4.1□□□□□ -1.75
VMP1-215ENST00000592619 DSCR4P56555 118 aaPredicted RBP4.1□□□□□ -1.75
VMP1-215ENST00000592619 FUT5Q11128 374 aa4.1□□□□□ -1.75
VMP1-215ENST00000592619 LGALS9BQ3B8N2 356 aa4.1□□□□□ -1.75
VMP1-215ENST00000592619 C9orf153Q5TBE3 101 aa4.1□□□□□ -1.75
VMP1-215ENST00000592619 TIMM17AQ99595 171 aa4.1□□□□□ -1.75
VMP1-215ENST00000592619 NPVFQ9HCQ7 196 aa4.1□□□□□ -1.75
VMP1-215ENST00000592619 TENM4Q6N022 2769 aa4.1□□□□□ -1.75
VMP1-215ENST00000592619 ZNF462Q96JM2 2506 aa4.1□□□□□ -1.75
VMP1-215ENST00000592619 C19orf84I3L1E1 186 aa4.09□□□□□ -1.75
VMP1-215ENST00000592619 TMEM256-PLSCR3K7ERE1 68 aa4.09□□□□□ -1.75
VMP1-215ENST00000592619 SLC25A5P05141 298 aaKnown RBP4.09□□□□□ -1.75
VMP1-215ENST00000592619 SNCAP37840 140 aa4.09□□□□□ -1.75
VMP1-215ENST00000592619 ZNF117Q03924 483 aa4.09□□□□□ -1.75
VMP1-215ENST00000592619 AKR1C1Q04828 323 aa4.09□□□□□ -1.75
VMP1-215ENST00000592619 TMEM155Q4W5P6 130 aa4.09□□□□□ -1.75
VMP1-215ENST00000592619 ALKAL2Q6UX46 152 aa4.09□□□□□ -1.75
VMP1-215ENST00000592619 ARPINQ7Z6K5 226 aa4.09□□□□□ -1.75
VMP1-215ENST00000592619 Q8N7P7 452 aa4.09□□□□□ -1.75
VMP1-215ENST00000592619 ATP6V0E2Q8NHE4 81 aa4.09□□□□□ -1.75
VMP1-215ENST00000592619 SND1-IT1Q9HBX3 110 aa4.09□□□□□ -1.75
VMP1-215ENST00000592619 BCL2L10Q9HD36 194 aa4.09□□□□□ -1.75
VMP1-215ENST00000592619 INS-IGF2F8WCM5 200 aa4.08□□□□□ -1.76
VMP1-215ENST00000592619 FXYD1O00168 92 aa4.08□□□□□ -1.76
VMP1-215ENST00000592619 HRASP01112 189 aa4.08□□□□□ -1.76
VMP1-215ENST00000592619 PRM2P04554 102 aa4.08□□□□□ -1.76
VMP1-215ENST00000592619 INAFM2P0DMQ5 153 aa4.08□□□□□ -1.76
VMP1-215ENST00000592619 KRTAP10-5P60370 271 aa4.08□□□□□ -1.76
VMP1-215ENST00000592619 UBE2BP63146 152 aa4.08□□□□□ -1.76
VMP1-215ENST00000592619 OR2T2Q6IF00 324 aa4.08□□□□□ -1.76
VMP1-215ENST00000592619 BPIFA4PQ86YQ2 179 aa4.08□□□□□ -1.76
VMP1-215ENST00000592619 SLC25A29Q8N8R3 303 aa4.08□□□□□ -1.76
VMP1-215ENST00000592619 OR8A1Q8NGG7 326 aa4.08□□□□□ -1.76
VMP1-215ENST00000592619 GCN1Q92616 2671 aaKnown RBP4.08□□□□□ -1.76
VMP1-215ENST00000592619 RMI2Q96E14 147 aa4.08□□□□□ -1.76
VMP1-215ENST00000592619 CYYR1Q96J86 154 aa4.08□□□□□ -1.76
VMP1-215ENST00000592619 YPEL2Q96QA6 119 aa4.08□□□□□ -1.76
VMP1-215ENST00000592619 RPP21Q9H633 154 aaKnown RBP4.08□□□□□ -1.76
VMP1-215ENST00000592619 UQCR10Q9UDW1 63 aa4.08□□□□□ -1.76
VMP1-215ENST00000592619 KLK5Q9Y337 293 aaPredicted RBP4.08□□□□□ -1.76
VMP1-215ENST00000592619 SERP1Q9Y6X1 66 aa4.08□□□□□ -1.76
VMP1-215ENST00000592619 SPTA1P02549 2419 aa4.07□□□□□ -1.76
VMP1-215ENST00000592619 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.07□□□□□ -1.76
VMP1-215ENST00000592619 TRBV20-1A0A075B6N2 111 aa4.07□□□□□ -1.76
VMP1-215ENST00000592619 IGHV3OR15-7A0A075B7D8 119 aa4.07□□□□□ -1.76
VMP1-215ENST00000592619 A0A0D9SG52 128 aa4.07□□□□□ -1.76
VMP1-215ENST00000592619 A0A0J9YW62 118 aa4.07□□□□□ -1.76
VMP1-215ENST00000592619 LOC107986453A0A1B0GWG9 222 aa4.07□□□□□ -1.76
VMP1-215ENST00000592619 C17orf51A8MQB3 221 aa4.07□□□□□ -1.76
VMP1-215ENST00000592619 BUB1B-PAK6H3BSN5 160 aa4.07□□□□□ -1.76
VMP1-215ENST00000592619 H3BT86 120 aa4.07□□□□□ -1.76
VMP1-215ENST00000592619 K7EP34 96 aa4.07□□□□□ -1.76
VMP1-215ENST00000592619 SYNGR2O43760 224 aa4.07□□□□□ -1.76
VMP1-215ENST00000592619 GABARAPO95166 117 aa4.07□□□□□ -1.76
VMP1-215ENST00000592619 TRACP01848 142 aa4.07□□□□□ -1.76
VMP1-215ENST00000592619 CXCL1P09341 107 aa4.07□□□□□ -1.76
VMP1-215ENST00000592619 S100A4P26447 101 aaKnown RBP4.07□□□□□ -1.76
VMP1-215ENST00000592619 DYNLT3P51808 116 aa4.07□□□□□ -1.76
VMP1-215ENST00000592619 TAS2R45P59539 299 aa4.07□□□□□ -1.76
VMP1-215ENST00000592619 YPEL3P61236 119 aaPredicted RBP4.07□□□□□ -1.76
VMP1-215ENST00000592619 FOXF1Q12946 379 aa4.07□□□□□ -1.76
VMP1-215ENST00000592619 TDRG1Q3Y452 100 aa4.07□□□□□ -1.76
VMP1-215ENST00000592619 LAIR2Q6ISS4 152 aa4.07□□□□□ -1.76
VMP1-215ENST00000592619 UNQ5815/PRO19632Q6UWF5 114 aa4.07□□□□□ -1.76
VMP1-215ENST00000592619 SH2D6Q7Z4S9 175 aa4.07□□□□□ -1.76
VMP1-215ENST00000592619 ZNF645Q8N7E2 425 aa4.07□□□□□ -1.76
VMP1-215ENST00000592619 C15orf56Q8N910 161 aa4.07□□□□□ -1.76
VMP1-215ENST00000592619 WFDC11Q8NEX6 87 aa4.07□□□□□ -1.76
VMP1-215ENST00000592619 ZNF431Q8TF32 576 aaPredicted RBP4.07□□□□□ -1.76
VMP1-215ENST00000592619 POP5Q969H6 163 aaKnown RBP4.07□□□□□ -1.76
VMP1-215ENST00000592619 MAL2Q969L2 176 aa4.07□□□□□ -1.76
VMP1-215ENST00000592619 RBMXL1Q96E39 390 aaKnown RBP4.07□□□□□ -1.76
VMP1-215ENST00000592619 FAM215AQ9Y5M1 114 aa4.07□□□□□ -1.76
VMP1-215ENST00000592619 NUP214P35658 2090 aaPredicted RBP4.07□□□□□ -1.76
VMP1-215ENST00000592619 ARHGAP21Q5T5U3 1957 aa4.07□□□□□ -1.76
VMP1-215ENST00000592619 COL12A1Q99715 3063 aa4.06□□□□□ -1.76
VMP1-215ENST00000592619 NINQ8N4C6 2090 aa4.06□□□□□ -1.76
VMP1-215ENST00000592619 A0A096LNJ9 63 aa4.06□□□□□ -1.76
VMP1-215ENST00000592619 F8W1H4 67 aa4.06□□□□□ -1.76
VMP1-215ENST00000592619 MT-ATP8P03928 68 aa4.06□□□□□ -1.76
VMP1-215ENST00000592619 LINC01554Q52M75 96 aa4.06□□□□□ -1.76
VMP1-215ENST00000592619 LGALS9CQ6DKI2 356 aa4.06□□□□□ -1.76
VMP1-215ENST00000592619 ZNF563Q8TA94 476 aa4.06□□□□□ -1.76
VMP1-215ENST00000592619 HIST1H2BLQ99880 126 aa4.06□□□□□ -1.76
VMP1-215ENST00000592619 NCOA6Q14686 2063 aaPredicted RBP4.06□□□□□ -1.76
VMP1-215ENST00000592619 KIAA1549Q9HCM3 1950 aa4.05□□□□□ -1.76
VMP1-215ENST00000592619 CNTRLQ7Z7A1 2325 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms