RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 IGKV3D-20A0A0C4DH25 116 aa9.46□□□□□ -0.9
APOC1-208ENST00000592535 PGPEP1LA6NFU8 196 aa9.46□□□□□ -0.9
APOC1-208ENST00000592535 UMAD1C9J7I0 102 aa9.46□□□□□ -0.9
APOC1-208ENST00000592535 RS1O15537 224 aa9.46□□□□□ -0.9
APOC1-208ENST00000592535 SULT1A2P50226 295 aa9.46□□□□□ -0.9
APOC1-208ENST00000592535 ZNF506Q5JVG8 444 aa9.46□□□□□ -0.9
APOC1-208ENST00000592535 CFAP126Q5VTH2 177 aa9.46□□□□□ -0.9
APOC1-208ENST00000592535 ALKAL2Q6UX46 152 aa9.46□□□□□ -0.9
APOC1-208ENST00000592535 WFDC10BQ8IUB3 73 aa9.46□□□□□ -0.9
APOC1-208ENST00000592535 HIST1H2BAQ96A08 127 aa9.46□□□□□ -0.9
APOC1-208ENST00000592535 TXNDC17Q9BRA2 123 aa9.46□□□□□ -0.9
APOC1-208ENST00000592535 KRTAP17-1Q9BYP8 105 aa9.46□□□□□ -0.9
APOC1-208ENST00000592535 IGHV3-73A0A0B4J1V6 119 aa9.45□□□□□ -0.9
APOC1-208ENST00000592535 FABP5P3A8MUU1 101 aa9.45□□□□□ -0.9
APOC1-208ENST00000592535 RAB5CP51148 216 aa9.45□□□□□ -0.9
APOC1-208ENST00000592535 Q6ZRN7 208 aaPredicted RBP9.45□□□□□ -0.9
APOC1-208ENST00000592535 SPATA12Q7Z6I5 190 aa9.45□□□□□ -0.9
APOC1-208ENST00000592535 PTH2Q96A98 100 aa9.45□□□□□ -0.9
APOC1-208ENST00000592535 TNFRSF18Q9Y5U5 241 aa9.45□□□□□ -0.9
APOC1-208ENST00000592535 CRIP1P50238 77 aa9.44□□□□□ -0.9
APOC1-208ENST00000592535 CST9LP1Q5W188 147 aa9.44□□□□□ -0.9
APOC1-208ENST00000592535 SLC25A29Q8N8R3 303 aa9.44□□□□□ -0.9
APOC1-208ENST00000592535 NHLRC2Q8NBF2 726 aa9.44□□□□□ -0.9
APOC1-208ENST00000592535 ZC2HC1AQ96GY0 325 aa9.44□□□□□ -0.9
APOC1-208ENST00000592535 LY96Q9Y6Y9 160 aa9.44□□□□□ -0.9
APOC1-208ENST00000592535 CIDEAO60543 219 aa9.43□□□□□ -0.9
APOC1-208ENST00000592535 S100A4P26447 101 aaKnown RBP9.43□□□□□ -0.9
APOC1-208ENST00000592535 UBE2G1P62253 170 aa9.43□□□□□ -0.9
APOC1-208ENST00000592535 FAM213BQ8TBF2 198 aa9.43□□□□□ -0.9
APOC1-208ENST00000592535 MBD3L1Q8WWY6 194 aa9.43□□□□□ -0.9
APOC1-208ENST00000592535 FMC1Q96HJ9 113 aa9.43□□□□□ -0.9
APOC1-208ENST00000592535 A0A1B0GV50 99 aa9.42□□□□□ -0.9
APOC1-208ENST00000592535 TRBV6-4A0A1B0GX49 114 aa9.42□□□□□ -0.9
APOC1-208ENST00000592535 B4DEV8 164 aa9.42□□□□□ -0.9
APOC1-208ENST00000592535 M0R036 132 aa9.42□□□□□ -0.9
APOC1-208ENST00000592535 PAGE4O60829 102 aa9.42□□□□□ -0.9
APOC1-208ENST00000592535 SH2D1AO60880 128 aa9.42□□□□□ -0.9
APOC1-208ENST00000592535 DNAH10OSP0CZ25 163 aa9.42□□□□□ -0.9
APOC1-208ENST00000592535 ASIPP42127 132 aa9.42□□□□□ -0.9
APOC1-208ENST00000592535 KRTAP10-2P60368 255 aa9.42□□□□□ -0.9
APOC1-208ENST00000592535 RHOHQ15669 191 aa9.42□□□□□ -0.9
APOC1-208ENST00000592535 COX8CQ7Z4L0 72 aa9.42□□□□□ -0.9
APOC1-208ENST00000592535 SH2D6Q7Z4S9 175 aa9.42□□□□□ -0.9
APOC1-208ENST00000592535 SFT2D1Q8WV19 159 aa9.42□□□□□ -0.9
APOC1-208ENST00000592535 PRADC1Q9BSG0 188 aa9.42□□□□□ -0.9
APOC1-208ENST00000592535 ZFP30Q9Y2G7 519 aa9.42□□□□□ -0.9
APOC1-208ENST00000592535 TRAV9-2A0A087WT02 112 aa9.41□□□□□ -0.9
APOC1-208ENST00000592535 TRAV1-1A0A0B4J248 108 aa9.41□□□□□ -0.9
APOC1-208ENST00000592535 TRBV6-1A0A0K0K1D8 114 aa9.41□□□□□ -0.9
APOC1-208ENST00000592535 KRBOX1C9JBD0 128 aa9.41□□□□□ -0.9
APOC1-208ENST00000592535 H3BVH4 76 aa9.41□□□□□ -0.9
APOC1-208ENST00000592535 AKR1C3P42330 323 aa9.41□□□□□ -0.9
APOC1-208ENST00000592535 TIRAPP58753 221 aa9.41□□□□□ -0.9
APOC1-208ENST00000592535 LYPD6BQ8NI32 183 aa9.41□□□□□ -0.9
APOC1-208ENST00000592535 TCEAL7Q9BRU2 100 aa9.41□□□□□ -0.9
APOC1-208ENST00000592535 PARLQ9H300 379 aa9.41□□□□□ -0.9
APOC1-208ENST00000592535 IL36BQ9NZH7 164 aa9.41□□□□□ -0.9
APOC1-208ENST00000592535 GRIFINA4D1Z8 144 aa9.4□□□□□ -0.9
APOC1-208ENST00000592535 LTAP01374 205 aa9.4□□□□□ -0.9
APOC1-208ENST00000592535 MGST1P10620 155 aaKnown RBP9.4□□□□□ -0.9
APOC1-208ENST00000592535 EVI2AP22794 236 aa9.4□□□□□ -0.9
APOC1-208ENST00000592535 BLOC1S1P78537 153 aa9.4□□□□□ -0.9
APOC1-208ENST00000592535 CLLU1Q5K131 121 aa9.4□□□□□ -0.9
APOC1-208ENST00000592535 FAM162BQ5T6X4 162 aa9.4□□□□□ -0.9
APOC1-208ENST00000592535 Q6ZSN1 163 aa9.4□□□□□ -0.9
APOC1-208ENST00000592535 JPT2Q9H910 190 aa9.4□□□□□ -0.9
APOC1-208ENST00000592535 RYR1P21817 5038 aa9.4□□□□□ -0.91
APOC1-208ENST00000592535 A8MWV9 139 aa9.39□□□□□ -0.91
APOC1-208ENST00000592535 ARMS2P0C7Q2 107 aa9.39□□□□□ -0.91
APOC1-208ENST00000592535 ZNF674Q2M3X9 581 aa9.39□□□□□ -0.91
APOC1-208ENST00000592535 PIK3CD-AS1Q5SR53 167 aa9.39□□□□□ -0.91
APOC1-208ENST00000592535 DNLZQ5SXM8 178 aa9.39□□□□□ -0.91
APOC1-208ENST00000592535 NFE4Q86UQ8 179 aa9.39□□□□□ -0.91
APOC1-208ENST00000592535 SAMD10Q9BYL1 202 aa9.39□□□□□ -0.91
APOC1-208ENST00000592535 MSRB1Q9NZV6 116 aa9.39□□□□□ -0.91
APOC1-208ENST00000592535 LRP1BQ9NZR2 4599 aa9.39□□□□□ -0.91
APOC1-208ENST00000592535 TMSB15BA0A087X1C1 80 aa9.38□□□□□ -0.91
APOC1-208ENST00000592535 IGHV3-38A0A0C4DH36 116 aa9.38□□□□□ -0.91
APOC1-208ENST00000592535 SCO2A0A1W2PP80 73 aa9.38□□□□□ -0.91
APOC1-208ENST00000592535 K7EP13 123 aa9.38□□□□□ -0.91
APOC1-208ENST00000592535 CDK2AP2O75956 126 aa9.38□□□□□ -0.91
APOC1-208ENST00000592535 CRYGDP07320 174 aa9.38□□□□□ -0.91
APOC1-208ENST00000592535 H2AFB1P0C5Y9 115 aa9.38□□□□□ -0.91
APOC1-208ENST00000592535 ERVFC1-1P60608 527 aa9.38□□□□□ -0.91
APOC1-208ENST00000592535 LINC01559Q495D7 138 aa9.38□□□□□ -0.91
APOC1-208ENST00000592535 DMRTA1Q5VZB9 504 aa9.38□□□□□ -0.91
APOC1-208ENST00000592535 ZFP2Q6ZN57 461 aa9.38□□□□□ -0.91
APOC1-208ENST00000592535 CCL20P78556 96 aa9.37□□□□□ -0.91
APOC1-208ENST00000592535 OR10J3Q5JRS4 329 aa9.37□□□□□ -0.91
APOC1-208ENST00000592535 UFSP1Q6NVU6 142 aa9.37□□□□□ -0.91
APOC1-208ENST00000592535 SYT8Q8NBV8 401 aa9.37□□□□□ -0.91
APOC1-208ENST00000592535 ATP6V0E2Q8NHE4 81 aa9.37□□□□□ -0.91
APOC1-208ENST00000592535 TRAV8-6A0A0B4J262 113 aa9.36□□□□□ -0.91
APOC1-208ENST00000592535 GAGE12JA6NER3 117 aa9.36□□□□□ -0.91
APOC1-208ENST00000592535 FUSP35637 526 aaKnown RBP eCLIP9.36□□□□□ -0.91
APOC1-208ENST00000592535 GAGE1Q13065 139 aa9.36□□□□□ -0.91
APOC1-208ENST00000592535 GAGE4Q13068 117 aa9.36□□□□□ -0.91
APOC1-208ENST00000592535 GAGE5Q13069 117 aa9.36□□□□□ -0.91
APOC1-208ENST00000592535 GAGE13Q4V321 117 aa9.36□□□□□ -0.91
APOC1-208ENST00000592535 LINC01556Q5JQF7 62 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms