RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 ALG5Q9Y673 324 aa12.67□□□□□ -0.38
CCDC43-205ENST00000592333 LRCOL1A6NCL2 159 aa12.66□□□□□ -0.38
CCDC43-205ENST00000592333 OR10J3Q5JRS4 329 aa12.66□□□□□ -0.38
CCDC43-205ENST00000592333 SGK494Q96LW2 274 aa12.66□□□□□ -0.38
CCDC43-205ENST00000592333 TMEM70Q9BUB7 260 aa12.66□□□□□ -0.38
CCDC43-205ENST00000592333 A8MWV9 139 aa12.65□□□□□ -0.38
CCDC43-205ENST00000592333 GGTLC3B5MD39 225 aa12.65□□□□□ -0.38
CCDC43-205ENST00000592333 PTTG1O95997 202 aa12.65□□□□□ -0.38
CCDC43-205ENST00000592333 RNASE3P12724 160 aaKnown RBP12.65□□□□□ -0.38
CCDC43-205ENST00000592333 ZNF506Q5JVG8 444 aa12.65□□□□□ -0.38
CCDC43-205ENST00000592333 DPPA3Q6W0C5 159 aa12.65□□□□□ -0.38
CCDC43-205ENST00000592333 ATP6V0E2Q8NHE4 81 aa12.65□□□□□ -0.38
CCDC43-205ENST00000592333 NKX6-2Q9C056 277 aaPredicted RBP12.65□□□□□ -0.38
CCDC43-205ENST00000592333 BATF3Q9NR55 127 aa12.65□□□□□ -0.38
CCDC43-205ENST00000592333 INAFM2P0DMQ5 153 aa12.64□□□□□ -0.39
CCDC43-205ENST00000592333 FUSP35637 526 aaKnown RBP eCLIP12.64□□□□□ -0.39
CCDC43-205ENST00000592333 PRNTQ86SH4 94 aa12.64□□□□□ -0.39
CCDC43-205ENST00000592333 MED28Q9H204 178 aa12.64□□□□□ -0.39
CCDC43-205ENST00000592333 IGLV5-52A0A0A0MRZ9 124 aa12.63□□□□□ -0.39
CCDC43-205ENST00000592333 PGPEP1LA6NFU8 196 aa12.63□□□□□ -0.39
CCDC43-205ENST00000592333 FABP5P3A8MUU1 101 aa12.63□□□□□ -0.39
CCDC43-205ENST00000592333 C1QBP02746 253 aa12.63□□□□□ -0.39
CCDC43-205ENST00000592333 Q5VSD8 79 aa12.63□□□□□ -0.39
CCDC43-205ENST00000592333 INO80EQ8NBZ0 244 aaPredicted RBP12.63□□□□□ -0.39
CCDC43-205ENST00000592333 TM2D2Q9BX73 214 aa12.63□□□□□ -0.39
CCDC43-205ENST00000592333 BORCS7-ASMTA0A0B4J1R7 106 aa12.62□□□□□ -0.39
CCDC43-205ENST00000592333 Q8N814 137 aa12.62□□□□□ -0.39
CCDC43-205ENST00000592333 GIPP09681 153 aaPredicted RBP12.61□□□□□ -0.39
CCDC43-205ENST00000592333 DNLZQ5SXM8 178 aa12.61□□□□□ -0.39
CCDC43-205ENST00000592333 HIST1H2BAQ96A08 127 aa12.61□□□□□ -0.39
CCDC43-205ENST00000592333 PARLQ9H300 379 aa12.61□□□□□ -0.39
CCDC43-205ENST00000592333 IL36BQ9NZH7 164 aa12.61□□□□□ -0.39
CCDC43-205ENST00000592333 A0A087WWC5 75 aa12.6□□□□□ -0.39
CCDC43-205ENST00000592333 CTXND1A0A1B0GTU2 59 aa12.6□□□□□ -0.39
CCDC43-205ENST00000592333 FAM229AH3BQW9 127 aa12.6□□□□□ -0.39
CCDC43-205ENST00000592333 S100A4P26447 101 aaKnown RBP12.6□□□□□ -0.39
CCDC43-205ENST00000592333 FGF8P55075 233 aaPredicted RBP12.6□□□□□ -0.39
CCDC43-205ENST00000592333 TOR2AQ5JU69 321 aa12.6□□□□□ -0.39
CCDC43-205ENST00000592333 COX8CQ7Z4L0 72 aa12.6□□□□□ -0.39
CCDC43-205ENST00000592333 TRAV8-3A0A0A6YYJ7 113 aa12.59□□□□□ -0.39
CCDC43-205ENST00000592333 IGHV3-73A0A0B4J1V6 119 aa12.59□□□□□ -0.39
CCDC43-205ENST00000592333 IGKV3D-20A0A0C4DH25 116 aa12.59□□□□□ -0.39
CCDC43-205ENST00000592333 LINC00694P0DN24 101 aa12.59□□□□□ -0.39
CCDC43-205ENST00000592333 ASIPP42127 132 aa12.59□□□□□ -0.39
CCDC43-205ENST00000592333 ZFP30Q9Y2G7 519 aa12.59□□□□□ -0.39
CCDC43-205ENST00000592333 ARL2-SNX15V9GYD0 113 aa12.59□□□□□ -0.39
CCDC43-205ENST00000592333 IFNA7P01567 189 aa12.58□□□□□ -0.4
CCDC43-205ENST00000592333 LINC00479Q96M42 142 aa12.58□□□□□ -0.4
CCDC43-205ENST00000592333 TCEAL7Q9BRU2 100 aa12.58□□□□□ -0.4
CCDC43-205ENST00000592333 COX11Q9Y6N1 276 aa12.58□□□□□ -0.4
CCDC43-205ENST00000592333 FAT1Q14517 4588 aa12.57□□□□□ -0.4
CCDC43-205ENST00000592333 DMBT1Q9UGM3 2413 aaPredicted RBP12.57□□□□□ -0.4
CCDC43-205ENST00000592333 RHODO00212 210 aa12.57□□□□□ -0.4
CCDC43-205ENST00000592333 IGHV3-30P01768 117 aa12.57□□□□□ -0.4
CCDC43-205ENST00000592333 IGHV3-33P01772 117 aa12.57□□□□□ -0.4
CCDC43-205ENST00000592333 IGHV3-30-3P0DP02 117 aa12.57□□□□□ -0.4
CCDC43-205ENST00000592333 IGHV3-30-5P0DP03 117 aa12.57□□□□□ -0.4
CCDC43-205ENST00000592333 RPL7L1Q6DKI1 246 aaKnown RBP12.57□□□□□ -0.4
CCDC43-205ENST00000592333 UFSP1Q6NVU6 142 aa12.57□□□□□ -0.4
CCDC43-205ENST00000592333 Q9HAA7 133 aa12.57□□□□□ -0.4
CCDC43-205ENST00000592333 RNF222A6NCQ9 220 aa12.56□□□□□ -0.4
CCDC43-205ENST00000592333 PEX7O00628 323 aa12.56□□□□□ -0.4
CCDC43-205ENST00000592333 SEC11BP0C7V7 166 aa12.56□□□□□ -0.4
CCDC43-205ENST00000592333 LGALSLQ3ZCW2 172 aaPredicted RBP12.56□□□□□ -0.4
CCDC43-205ENST00000592333 Q5BKY6 102 aa12.56□□□□□ -0.4
CCDC43-205ENST00000592333 SYT8Q8NBV8 401 aa12.56□□□□□ -0.4
CCDC43-205ENST00000592333 FAM74A7A6NL05 159 aa12.55□□□□□ -0.4
CCDC43-205ENST00000592333 ZNF726P1Q15940 193 aa12.55□□□□□ -0.4
CCDC43-205ENST00000592333 Q6ZSN1 163 aa12.55□□□□□ -0.4
CCDC43-205ENST00000592333 Q86TA4 180 aa12.55□□□□□ -0.4
CCDC43-205ENST00000592333 SRRM2Q9UQ35 2752 aaKnown RBP12.55□□□□□ -0.4
CCDC43-205ENST00000592333 TRAV34A0A0B4J273 112 aa12.54□□□□□ -0.4
CCDC43-205ENST00000592333 TRBV6-1A0A0K0K1D8 114 aa12.54□□□□□ -0.4
CCDC43-205ENST00000592333 B4DEV8 164 aa12.54□□□□□ -0.4
CCDC43-205ENST00000592333 AKR1C8PQ5T2L2 129 aa12.54□□□□□ -0.4
CCDC43-205ENST00000592333 FMC1Q96HJ9 113 aa12.54□□□□□ -0.4
CCDC43-205ENST00000592333 HERC1Q15751 4861 aa12.54□□□□□ -0.4
CCDC43-205ENST00000592333 GAGE12JA6NER3 117 aa12.53□□□□□ -0.4
CCDC43-205ENST00000592333 KRBOX1C9JBD0 128 aa12.53□□□□□ -0.4
CCDC43-205ENST00000592333 LCE2BO14633 110 aa12.53□□□□□ -0.4
CCDC43-205ENST00000592333 FHITP49789 147 aa12.53□□□□□ -0.4
CCDC43-205ENST00000592333 GAGE1Q13065 139 aa12.53□□□□□ -0.4
CCDC43-205ENST00000592333 GAGE4Q13068 117 aa12.53□□□□□ -0.4
CCDC43-205ENST00000592333 GAGE5Q13069 117 aa12.53□□□□□ -0.4
CCDC43-205ENST00000592333 GAGE13Q4V321 117 aa12.53□□□□□ -0.4
CCDC43-205ENST00000592333 FAM162BQ5T6X4 162 aa12.53□□□□□ -0.4
CCDC43-205ENST00000592333 FXYD6-FXYD2A0A087WZ82 144 aa12.52□□□□□ -0.41
CCDC43-205ENST00000592333 SMR3BP02814 79 aaPredicted RBP12.52□□□□□ -0.41
CCDC43-205ENST00000592333 OR11H4Q8NGC9 324 aa12.52□□□□□ -0.41
CCDC43-205ENST00000592333 OR2T35Q8NGX2 323 aa12.52□□□□□ -0.41
CCDC43-205ENST00000592333 RMI2Q96E14 147 aa12.52□□□□□ -0.41
CCDC43-205ENST00000592333 CHCHD7Q9BUK0 85 aa12.52□□□□□ -0.41
CCDC43-205ENST00000592333 VPS13BQ7Z7G8 4022 aa12.51□□□□□ -0.41
CCDC43-205ENST00000592333 TRBV10-1A0A0K0K1A3 114 aa12.51□□□□□ -0.41
CCDC43-205ENST00000592333 ARMS2P0C7Q2 107 aa12.51□□□□□ -0.41
CCDC43-205ENST00000592333 CRIP1P50238 77 aa12.51□□□□□ -0.41
CCDC43-205ENST00000592333 UBE2G2P60604 165 aa12.51□□□□□ -0.41
CCDC43-205ENST00000592333 UBE2G1P62253 170 aa12.51□□□□□ -0.41
CCDC43-205ENST00000592333 ZC2HC1AQ96GY0 325 aa12.51□□□□□ -0.41
CCDC43-205ENST00000592333 SFRP2Q96HF1 295 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms