RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 RBFOX3A6NFN3 312 aa10.6□□□□□ -0.71
DDX39A-216ENST00000591275 PPT1P50897 306 aa10.6□□□□□ -0.71
DDX39A-216ENST00000591275 TMEM183BQ1AE95 376 aa10.6□□□□□ -0.71
DDX39A-216ENST00000591275 GCSAMLQ5JQS6 135 aa10.6□□□□□ -0.71
DDX39A-216ENST00000591275 ZNF506Q5JVG8 444 aa10.6□□□□□ -0.71
DDX39A-216ENST00000591275 SERTAD4-AS1Q5TG53 156 aa10.6□□□□□ -0.71
DDX39A-216ENST00000591275 TMEM183AQ8IXX5 376 aa10.6□□□□□ -0.71
DDX39A-216ENST00000591275 NHLRC2Q8NBF2 726 aa10.6□□□□□ -0.71
DDX39A-216ENST00000591275 HMCN2Q8NDA2 5059 aa10.6□□□□□ -0.71
DDX39A-216ENST00000591275 LRP1Q07954 4544 aaKnown RBP10.6□□□□□ -0.71
DDX39A-216ENST00000591275 IBA57-AS1B1ANH7 110 aa10.59□□□□□ -0.71
DDX39A-216ENST00000591275 F8W036 122 aa10.59□□□□□ -0.71
DDX39A-216ENST00000591275 SNAPINO95295 136 aa10.59□□□□□ -0.71
DDX39A-216ENST00000591275 APOC3P02656 99 aa10.59□□□□□ -0.71
DDX39A-216ENST00000591275 ZNF138P52744 262 aa10.59□□□□□ -0.71
DDX39A-216ENST00000591275 LINC01556Q5JQF7 62 aa10.59□□□□□ -0.71
DDX39A-216ENST00000591275 SYT8Q8NBV8 401 aa10.59□□□□□ -0.71
DDX39A-216ENST00000591275 OR10G9Q8NGN4 311 aa10.59□□□□□ -0.71
DDX39A-216ENST00000591275 OR10G7Q8NGN6 311 aa10.59□□□□□ -0.71
DDX39A-216ENST00000591275 SUN5Q8TC36 379 aa10.59□□□□□ -0.71
DDX39A-216ENST00000591275 RASL10AQ92737 203 aa10.59□□□□□ -0.71
DDX39A-216ENST00000591275 EIF5A2Q9GZV4 153 aaKnown RBP10.59□□□□□ -0.71
DDX39A-216ENST00000591275 IGHV3-16A0A0C4DH30 117 aa10.58□□□□□ -0.72
DDX39A-216ENST00000591275 IFNA1P01562 189 aa10.58□□□□□ -0.72
DDX39A-216ENST00000591275 SRSF3P84103 164 aaKnown RBP10.58□□□□□ -0.72
DDX39A-216ENST00000591275 WFDC2Q14508 124 aa10.58□□□□□ -0.72
DDX39A-216ENST00000591275 FFAR4Q5NUL3 377 aa10.58□□□□□ -0.72
DDX39A-216ENST00000591275 OR4C5Q8NGB2 326 aa10.58□□□□□ -0.72
DDX39A-216ENST00000591275 SPXQ9BT56 116 aa10.58□□□□□ -0.72
DDX39A-216ENST00000591275 SLC25A2Q9BXI2 301 aa10.58□□□□□ -0.72
DDX39A-216ENST00000591275 TRAV4A0A0B4J268 109 aa10.57□□□□□ -0.72
DDX39A-216ENST00000591275 IGHV3-30P01768 117 aa10.57□□□□□ -0.72
DDX39A-216ENST00000591275 IGHV3-33P01772 117 aa10.57□□□□□ -0.72
DDX39A-216ENST00000591275 IGHV3-30-3P0DP02 117 aa10.57□□□□□ -0.72
DDX39A-216ENST00000591275 IGHV3-30-5P0DP03 117 aa10.57□□□□□ -0.72
DDX39A-216ENST00000591275 ZNF726P1Q15940 193 aa10.57□□□□□ -0.72
DDX39A-216ENST00000591275 Q6ZSA8 131 aa10.57□□□□□ -0.72
DDX39A-216ENST00000591275 NBEAP1P0C6P0 100 aa10.56□□□□□ -0.72
DDX39A-216ENST00000591275 CCL20P78556 96 aa10.56□□□□□ -0.72
DDX39A-216ENST00000591275 OR10J3Q5JRS4 329 aa10.56□□□□□ -0.72
DDX39A-216ENST00000591275 MIR17HGQ75NE6 70 aa10.56□□□□□ -0.72
DDX39A-216ENST00000591275 SH2D6Q7Z4S9 175 aa10.56□□□□□ -0.72
DDX39A-216ENST00000591275 FAM167A-AS1Q96KT0 104 aa10.56□□□□□ -0.72
DDX39A-216ENST00000591275 NAGKQ9UJ70 344 aa10.56□□□□□ -0.72
DDX39A-216ENST00000591275 TRGV11A0A075B6L2 103 aa10.55□□□□□ -0.72
DDX39A-216ENST00000591275 TRAV8-6A0A0B4J262 113 aa10.55□□□□□ -0.72
DDX39A-216ENST00000591275 MAP1LC3B2A6NCE7 125 aa10.55□□□□□ -0.72
DDX39A-216ENST00000591275 LECT2O14960 151 aa10.55□□□□□ -0.72
DDX39A-216ENST00000591275 OR10J4P0C629 311 aa10.55□□□□□ -0.72
DDX39A-216ENST00000591275 TIRAPP58753 221 aa10.55□□□□□ -0.72
DDX39A-216ENST00000591275 FAM159AQ6UWV7 190 aa10.55□□□□□ -0.72
DDX39A-216ENST00000591275 RAB24Q969Q5 203 aa10.55□□□□□ -0.72
DDX39A-216ENST00000591275 MAP1LC3BQ9GZQ8 125 aa10.55□□□□□ -0.72
DDX39A-216ENST00000591275 MANBALQ9NQG1 85 aa10.55□□□□□ -0.72
DDX39A-216ENST00000591275 VAX2Q9UIW0 290 aa10.55□□□□□ -0.72
DDX39A-216ENST00000591275 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.54□□□□□ -0.72
DDX39A-216ENST00000591275 TRBV7-9A0A0J9YWB2 115 aa10.54□□□□□ -0.72
DDX39A-216ENST00000591275 A0A1W2PPV4 95 aa10.54□□□□□ -0.72
DDX39A-216ENST00000591275 SRP19P09132 144 aaKnown RBP10.54□□□□□ -0.72
DDX39A-216ENST00000591275 ADCYAP1P18509 176 aa10.54□□□□□ -0.72
DDX39A-216ENST00000591275 LINC01620Q4KN68 170 aa10.54□□□□□ -0.72
DDX39A-216ENST00000591275 Q6AWC8 147 aa10.54□□□□□ -0.72
DDX39A-216ENST00000591275 NKX6-2Q9C056 277 aaPredicted RBP10.54□□□□□ -0.72
DDX39A-216ENST00000591275 C9JQL5 133 aa10.53□□□□□ -0.72
DDX39A-216ENST00000591275 GNRH2O43555 120 aa10.53□□□□□ -0.72
DDX39A-216ENST00000591275 STAG3L2P0CL84 134 aa10.53□□□□□ -0.72
DDX39A-216ENST00000591275 STAG3L3P0CL85 134 aa10.53□□□□□ -0.72
DDX39A-216ENST00000591275 BCL2P10415 239 aa10.53□□□□□ -0.72
DDX39A-216ENST00000591275 GATA1P15976 413 aaPredicted RBP10.53□□□□□ -0.72
DDX39A-216ENST00000591275 CDC34P49427 236 aaPredicted RBP10.53□□□□□ -0.72
DDX39A-216ENST00000591275 SCXQ7RTU7 201 aa10.53□□□□□ -0.72
DDX39A-216ENST00000591275 FXYD5Q96DB9 178 aa10.53□□□□□ -0.72
DDX39A-216ENST00000591275 OR51M1Q9H341 326 aa10.53□□□□□ -0.72
DDX39A-216ENST00000591275 PLA2G2DQ9UNK4 145 aa10.53□□□□□ -0.72
DDX39A-216ENST00000591275 ARL2-SNX15V9GYD0 113 aa10.53□□□□□ -0.72
DDX39A-216ENST00000591275 TMEM250H0YL14 139 aa10.52□□□□□ -0.73
DDX39A-216ENST00000591275 M0R2P5 195 aa10.52□□□□□ -0.73
DDX39A-216ENST00000591275 CXorf1O96002 111 aa10.52□□□□□ -0.73
DDX39A-216ENST00000591275 CSN1S1P47710 185 aa10.52□□□□□ -0.73
DDX39A-216ENST00000591275 FAM74A3Q4VXF1 159 aa10.52□□□□□ -0.73
DDX39A-216ENST00000591275 Q8N3U1 123 aa10.52□□□□□ -0.73
DDX39A-216ENST00000591275 PAXXQ9BUH6 204 aa10.52□□□□□ -0.73
DDX39A-216ENST00000591275 PFN1P07737 140 aaKnown RBP10.51□□□□□ -0.73
DDX39A-216ENST00000591275 RANP62826 216 aaKnown RBP10.51□□□□□ -0.73
DDX39A-216ENST00000591275 SLC25A29Q8N8R3 303 aa10.51□□□□□ -0.73
DDX39A-216ENST00000591275 CLRN3Q8NCR9 226 aa10.51□□□□□ -0.73
DDX39A-216ENST00000591275 TM2D2Q9BX73 214 aa10.51□□□□□ -0.73
DDX39A-216ENST00000591275 RBAKDNA6NC62 111 aa10.5□□□□□ -0.73
DDX39A-216ENST00000591275 B4DEV8 164 aa10.5□□□□□ -0.73
DDX39A-216ENST00000591275 KRTAP10-4P60372 401 aaPredicted RBP10.5□□□□□ -0.73
DDX39A-216ENST00000591275 TDRG1Q3Y452 100 aa10.5□□□□□ -0.73
DDX39A-216ENST00000591275 GNG13Q9P2W3 67 aa10.5□□□□□ -0.73
DDX39A-216ENST00000591275 FBLL1A6NHQ2 334 aaKnown RBP10.49□□□□□ -0.73
DDX39A-216ENST00000591275 MEF2BQ02080 365 aaPredicted RBP10.49□□□□□ -0.73
DDX39A-216ENST00000591275 PNRC1Q12796 327 aaPredicted RBP10.49□□□□□ -0.73
DDX39A-216ENST00000591275 RHEBQ15382 184 aa10.49□□□□□ -0.73
DDX39A-216ENST00000591275 LELP1Q5T871 98 aa10.49□□□□□ -0.73
DDX39A-216ENST00000591275 PRADC1Q9BSG0 188 aa10.49□□□□□ -0.73
DDX39A-216ENST00000591275 IGHV3-73A0A0B4J1V6 119 aa10.48□□□□□ -0.73
DDX39A-216ENST00000591275 OR7C2O60412 319 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms