RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 MIFP14174 115 aa11.91□□□□□ -0.5
GCDH-213ENST00000590627 FOXA3P55318 350 aaPredicted RBP11.91□□□□□ -0.5
GCDH-213ENST00000590627 C16orf74Q96GX8 76 aa11.91□□□□□ -0.5
GCDH-213ENST00000590627 MDFICQ9P1T7 246 aa11.91□□□□□ -0.5
GCDH-213ENST00000590627 A0A1W2PPQ1 181 aa11.9□□□□□ -0.5
GCDH-213ENST00000590627 GRIFINA4D1Z8 144 aa11.9□□□□□ -0.5
GCDH-213ENST00000590627 IGLC6P0CF74 106 aa11.9□□□□□ -0.5
GCDH-213ENST00000590627 RNASE3P12724 160 aaKnown RBP11.9□□□□□ -0.5
GCDH-213ENST00000590627 SSBP4Q9BWG4 385 aaPredicted RBP11.9□□□□□ -0.5
GCDH-213ENST00000590627 SCRT2Q9NQ03 307 aa11.9□□□□□ -0.5
GCDH-213ENST00000590627 IL36BQ9NZH7 164 aa11.9□□□□□ -0.5
GCDH-213ENST00000590627 SMIM27A0A1W2PRY6 76 aa11.89□□□□□ -0.51
GCDH-213ENST00000590627 PLAC8L1A1L4L8 177 aa11.89□□□□□ -0.51
GCDH-213ENST00000590627 OR5AL1P0C617 328 aa11.89□□□□□ -0.51
GCDH-213ENST00000590627 GZMBP10144 247 aa11.89□□□□□ -0.51
GCDH-213ENST00000590627 TCL1AP56279 114 aa11.89□□□□□ -0.51
GCDH-213ENST00000590627 ZNF415Q09FC8 603 aa11.89□□□□□ -0.51
GCDH-213ENST00000590627 Q8NAQ8 132 aa11.89□□□□□ -0.51
GCDH-213ENST00000590627 GTSF1Q8WW33 167 aa11.89□□□□□ -0.51
GCDH-213ENST00000590627 C9orf85Q96MD7 179 aa11.89□□□□□ -0.51
GCDH-213ENST00000590627 IMMP2LQ96T52 175 aa11.89□□□□□ -0.51
GCDH-213ENST00000590627 RPS10P5Q9NQ39 176 aa11.89□□□□□ -0.51
GCDH-213ENST00000590627 F2Z2F3 143 aa11.88□□□□□ -0.51
GCDH-213ENST00000590627 SNAI2O43623 268 aa11.88□□□□□ -0.51
GCDH-213ENST00000590627 ARMS2P0C7Q2 107 aa11.88□□□□□ -0.51
GCDH-213ENST00000590627 S100A4P26447 101 aaKnown RBP11.88□□□□□ -0.51
GCDH-213ENST00000590627 ATRAIDQ6UW56 229 aa11.88□□□□□ -0.51
GCDH-213ENST00000590627 FER1L6-AS1Q8NA97 138 aa11.88□□□□□ -0.51
GCDH-213ENST00000590627 SPXQ9BT56 116 aa11.88□□□□□ -0.51
GCDH-213ENST00000590627 GSN-AS1Q9NRJ2 163 aa11.88□□□□□ -0.51
GCDH-213ENST00000590627 IGHV4-28A0A0C4DH34 117 aa11.87□□□□□ -0.51
GCDH-213ENST00000590627 H3BVH4 76 aa11.87□□□□□ -0.51
GCDH-213ENST00000590627 CTRLP40313 264 aa11.87□□□□□ -0.51
GCDH-213ENST00000590627 DAZ2Q13117 558 aaKnown RBP11.87□□□□□ -0.51
GCDH-213ENST00000590627 LINC00476Q8WZB0 136 aa11.87□□□□□ -0.51
GCDH-213ENST00000590627 PTH2Q96A98 100 aa11.87□□□□□ -0.51
GCDH-213ENST00000590627 CXorf65A6NEN9 183 aa11.86□□□□□ -0.51
GCDH-213ENST00000590627 HIGD1CA8MV81 97 aa11.86□□□□□ -0.51
GCDH-213ENST00000590627 WDR73Q6P4I2 378 aa11.86□□□□□ -0.51
GCDH-213ENST00000590627 CNFNQ9BYD5 112 aa11.86□□□□□ -0.51
GCDH-213ENST00000590627 NAT8BQ9UHF3 227 aa11.86□□□□□ -0.51
GCDH-213ENST00000590627 SNURFLB1AK76 121 aa11.85□□□□□ -0.51
GCDH-213ENST00000590627 C11orf68Q9H3H3 251 aaKnown RBP11.85□□□□□ -0.51
GCDH-213ENST00000590627 TIMM8BQ9Y5J9 83 aaPredicted RBP11.85□□□□□ -0.51
GCDH-213ENST00000590627 IGHV4-4A0A075B6R2 117 aa11.84□□□□□ -0.51
GCDH-213ENST00000590627 M0R2P5 195 aa11.84□□□□□ -0.51
GCDH-213ENST00000590627 NXPH4O95158 308 aa11.84□□□□□ -0.51
GCDH-213ENST00000590627 LGALS9BQ3B8N2 356 aa11.84□□□□□ -0.51
GCDH-213ENST00000590627 PIK3CD-AS1Q5SR53 167 aa11.84□□□□□ -0.51
GCDH-213ENST00000590627 LYZL1Q6UWQ5 148 aa11.84□□□□□ -0.51
GCDH-213ENST00000590627 NUP35Q8NFH5 326 aa11.84□□□□□ -0.51
GCDH-213ENST00000590627 NUPR2A6NF83 97 aa11.83□□□□□ -0.52
GCDH-213ENST00000590627 SPINK4O60575 86 aa11.83□□□□□ -0.52
GCDH-213ENST00000590627 CACNG7P62955 275 aa11.83□□□□□ -0.52
GCDH-213ENST00000590627 OR10AG1Q8NH19 301 aa11.83□□□□□ -0.52
GCDH-213ENST00000590627 PGLYRP4Q96LB8 373 aa11.83□□□□□ -0.52
GCDH-213ENST00000590627 NDUFAF3Q9BU61 184 aa11.83□□□□□ -0.52
GCDH-213ENST00000590627 TPPP3Q9BW30 176 aa11.83□□□□□ -0.52
GCDH-213ENST00000590627 PHLDA3Q9Y5J5 127 aa11.83□□□□□ -0.52
GCDH-213ENST00000590627 TRAV9-1A0A075B6T8 112 aa11.82□□□□□ -0.52
GCDH-213ENST00000590627 LYRM9A8MSI8 78 aa11.82□□□□□ -0.52
GCDH-213ENST00000590627 FAM3BP58499 235 aaPredicted RBP11.82□□□□□ -0.52
GCDH-213ENST00000590627 KCNIP4Q6PIL6 250 aa11.82□□□□□ -0.52
GCDH-213ENST00000590627 ZFP82Q8N141 532 aa11.82□□□□□ -0.52
GCDH-213ENST00000590627 LINC00612Q8N6U2 182 aa11.82□□□□□ -0.52
GCDH-213ENST00000590627 RASL10AQ92737 203 aa11.82□□□□□ -0.52
GCDH-213ENST00000590627 NOP10Q9NPE3 64 aaKnown RBP11.82□□□□□ -0.52
GCDH-213ENST00000590627 FRAS1Q86XX4 4008 aa11.82□□□□□ -0.52
GCDH-213ENST00000590627 A0A0J9YWU9 116 aa11.81□□□□□ -0.52
GCDH-213ENST00000590627 A0A1B0GUT8 65 aa11.81□□□□□ -0.52
GCDH-213ENST00000590627 LY6G6CO95867 125 aa11.81□□□□□ -0.52
GCDH-213ENST00000590627 S100PP25815 95 aa11.81□□□□□ -0.52
GCDH-213ENST00000590627 EMP1P54849 157 aa11.81□□□□□ -0.52
GCDH-213ENST00000590627 SYT8Q8NBV8 401 aa11.81□□□□□ -0.52
GCDH-213ENST00000590627 SMCO4Q9NRQ5 59 aa11.81□□□□□ -0.52
GCDH-213ENST00000590627 DKK2Q9UBU2 259 aa11.81□□□□□ -0.52
GCDH-213ENST00000590627 MUC4Q99102 2169 aa11.8□□□□□ -0.52
GCDH-213ENST00000590627 DEFB4AO15263 64 aa11.8□□□□□ -0.52
GCDH-213ENST00000590627 ZNF876PQ49A33 203 aa11.8□□□□□ -0.52
GCDH-213ENST00000590627 SPANXN1Q5VSR9 72 aa11.8□□□□□ -0.52
GCDH-213ENST00000590627 DMRTA1Q5VZB9 504 aa11.8□□□□□ -0.52
GCDH-213ENST00000590627 BORCS7Q96B45 105 aa11.8□□□□□ -0.52
GCDH-213ENST00000590627 BTF3L4Q96K17 158 aa11.8□□□□□ -0.52
GCDH-213ENST00000590627 KMT2AQ03164 3969 aa11.79□□□□□ -0.52
GCDH-213ENST00000590627 MUC21A0A0G2JKD1 596 aa11.79□□□□□ -0.52
GCDH-213ENST00000590627 MUC21A0A140T8X8 626 aa11.79□□□□□ -0.52
GCDH-213ENST00000590627 TEX48A0A1B0GUV7 120 aa11.79□□□□□ -0.52
GCDH-213ENST00000590627 M0R381 172 aa11.79□□□□□ -0.52
GCDH-213ENST00000590627 NTF3P20783 257 aa11.79□□□□□ -0.52
GCDH-213ENST00000590627 RIGQ13278 110 aa11.79□□□□□ -0.52
GCDH-213ENST00000590627 FAM222AQ5U5X8 452 aa11.79□□□□□ -0.52
GCDH-213ENST00000590627 CEMP1Q6PRD7 247 aaPredicted RBP11.79□□□□□ -0.52
GCDH-213ENST00000590627 Q6ZTI0 123 aa11.79□□□□□ -0.52
GCDH-213ENST00000590627 ATP5L2Q7Z4Y8 100 aa11.79□□□□□ -0.52
GCDH-213ENST00000590627 TRGV1A0A0A0MS02 117 aa11.78□□□□□ -0.52
GCDH-213ENST00000590627 A0A1B0GW15 77 aa11.78□□□□□ -0.52
GCDH-213ENST00000590627 SPART-AS1P0CW21 52 aa11.78□□□□□ -0.52
GCDH-213ENST00000590627 C18orf15Q96N68 181 aa11.78□□□□□ -0.52
GCDH-213ENST00000590627 YPEL4Q96NS1 127 aa11.78□□□□□ -0.52
GCDH-213ENST00000590627 MRPL16Q9NX20 251 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms