RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 MBD3L1Q8WWY6 194 aa7.76□□□□□ -1.17
SMAD4-211ENST00000590499 HIST1H2BAQ96A08 127 aa7.76□□□□□ -1.17
SMAD4-211ENST00000590499 KCNS1Q96KK3 526 aa7.76□□□□□ -1.17
SMAD4-211ENST00000590499 ARL2-SNX15V9GYD0 113 aa7.76□□□□□ -1.17
SMAD4-211ENST00000590499 KIAA1109Q2LD37 5005 aa7.75□□□□□ -1.17
SMAD4-211ENST00000590499 A0A096LPF7 62 aa7.75□□□□□ -1.17
SMAD4-211ENST00000590499 IFNA7P01567 189 aa7.75□□□□□ -1.17
SMAD4-211ENST00000590499 IGHV3-53P01767 116 aa7.75□□□□□ -1.17
SMAD4-211ENST00000590499 SLPIP03973 132 aa7.75□□□□□ -1.17
SMAD4-211ENST00000590499 CCL18P55774 89 aa7.75□□□□□ -1.17
SMAD4-211ENST00000590499 FHL2Q14192 279 aa7.75□□□□□ -1.17
SMAD4-211ENST00000590499 SAPCD1Q5SSQ6 148 aa7.75□□□□□ -1.17
SMAD4-211ENST00000590499 DPPA3Q6W0C5 159 aa7.75□□□□□ -1.17
SMAD4-211ENST00000590499 FAM213BQ8TBF2 198 aa7.75□□□□□ -1.17
SMAD4-211ENST00000590499 TCEAL7Q9BRU2 100 aa7.75□□□□□ -1.17
SMAD4-211ENST00000590499 SDF2L1Q9HCN8 221 aa7.75□□□□□ -1.17
SMAD4-211ENST00000590499 M0R2P5 195 aa7.74□□□□□ -1.17
SMAD4-211ENST00000590499 TPT1P13693 172 aaKnown RBP7.74□□□□□ -1.17
SMAD4-211ENST00000590499 CRYBA4P53673 196 aa7.74□□□□□ -1.17
SMAD4-211ENST00000590499 EIF5AP63241 154 aaKnown RBP7.74□□□□□ -1.17
SMAD4-211ENST00000590499 ESRGQ1W209 222 aa7.74□□□□□ -1.17
SMAD4-211ENST00000590499 LGALSLQ3ZCW2 172 aaPredicted RBP7.74□□□□□ -1.17
SMAD4-211ENST00000590499 ZFP69Q49AA0 526 aa7.74□□□□□ -1.17
SMAD4-211ENST00000590499 LINC00336Q6ZUF6 198 aa7.74□□□□□ -1.17
SMAD4-211ENST00000590499 COX8CQ7Z4L0 72 aa7.74□□□□□ -1.17
SMAD4-211ENST00000590499 UPK3BQ9BT76 320 aa7.74□□□□□ -1.17
SMAD4-211ENST00000590499 PRO0255Q9UI72 69 aa7.74□□□□□ -1.17
SMAD4-211ENST00000590499 TRAV4A0A0B4J268 109 aa7.73□□□□□ -1.17
SMAD4-211ENST00000590499 TRBV6-1A0A0K0K1D8 114 aa7.73□□□□□ -1.17
SMAD4-211ENST00000590499 PFDN1O60925 122 aa7.73□□□□□ -1.17
SMAD4-211ENST00000590499 C1QBP02746 253 aa7.73□□□□□ -1.17
SMAD4-211ENST00000590499 SFTA3P0C7M3 94 aa7.73□□□□□ -1.17
SMAD4-211ENST00000590499 PPT1P50897 306 aa7.73□□□□□ -1.17
SMAD4-211ENST00000590499 SFT2D1Q8WV19 159 aa7.73□□□□□ -1.17
SMAD4-211ENST00000590499 ZNF479Q96JC4 524 aa7.73□□□□□ -1.17
SMAD4-211ENST00000590499 C9orf85Q96MD7 179 aa7.73□□□□□ -1.17
SMAD4-211ENST00000590499 IGKV3D-20A0A0C4DH25 116 aa7.72□□□□□ -1.17
SMAD4-211ENST00000590499 NBDYA0A0U1RRE5 68 aa7.72□□□□□ -1.17
SMAD4-211ENST00000590499 A0A1B0GVY2 172 aa7.72□□□□□ -1.17
SMAD4-211ENST00000590499 PAGE4O60829 102 aa7.72□□□□□ -1.17
SMAD4-211ENST00000590499 SLAQ13239 276 aa7.72□□□□□ -1.17
SMAD4-211ENST00000590499 CST9LP1Q5W188 147 aa7.72□□□□□ -1.17
SMAD4-211ENST00000590499 ZC2HC1AQ96GY0 325 aa7.72□□□□□ -1.17
SMAD4-211ENST00000590499 FMC1Q96HJ9 113 aa7.72□□□□□ -1.17
SMAD4-211ENST00000590499 HHLA3Q9XRX5 114 aa7.72□□□□□ -1.17
SMAD4-211ENST00000590499 MRPS16Q9Y3D3 137 aaKnown RBP7.72□□□□□ -1.17
SMAD4-211ENST00000590499 DNAH5Q8TE73 4624 aa7.72□□□□□ -1.17
SMAD4-211ENST00000590499 A0A1B0GV50 99 aa7.71□□□□□ -1.18
SMAD4-211ENST00000590499 LTAP01374 205 aa7.71□□□□□ -1.18
SMAD4-211ENST00000590499 RNASE3P12724 160 aaKnown RBP7.71□□□□□ -1.18
SMAD4-211ENST00000590499 CRIP1P50238 77 aa7.71□□□□□ -1.18
SMAD4-211ENST00000590499 Q8N1X5 172 aa7.71□□□□□ -1.18
SMAD4-211ENST00000590499 PTH2Q96A98 100 aa7.71□□□□□ -1.18
SMAD4-211ENST00000590499 ZFP30Q9Y2G7 519 aa7.71□□□□□ -1.18
SMAD4-211ENST00000590499 ICOSQ9Y6W8 199 aa7.71□□□□□ -1.18
SMAD4-211ENST00000590499 LRP1BQ9NZR2 4599 aa7.71□□□□□ -1.18
SMAD4-211ENST00000590499 RYR1P21817 5038 aa7.71□□□□□ -1.18
SMAD4-211ENST00000590499 TRAV1-1A0A0B4J248 108 aa7.7□□□□□ -1.18
SMAD4-211ENST00000590499 TRGV4A0A0C4DH28 118 aa7.7□□□□□ -1.18
SMAD4-211ENST00000590499 FABP5P3A8MUU1 101 aa7.7□□□□□ -1.18
SMAD4-211ENST00000590499 ZNF575Q86XF7 245 aa7.7□□□□□ -1.18
SMAD4-211ENST00000590499 OR4C5Q8NGB2 326 aa7.7□□□□□ -1.18
SMAD4-211ENST00000590499 KRTAP1-5Q9BYS1 174 aa7.7□□□□□ -1.18
SMAD4-211ENST00000590499 Q9H8V8 135 aa7.7□□□□□ -1.18
SMAD4-211ENST00000590499 PGPEP1LA6NFU8 196 aa7.69□□□□□ -1.18
SMAD4-211ENST00000590499 PRSS29PA6NIE9 313 aa7.69□□□□□ -1.18
SMAD4-211ENST00000590499 K7EQD1 137 aa7.69□□□□□ -1.18
SMAD4-211ENST00000590499 RS1O15537 224 aa7.69□□□□□ -1.18
SMAD4-211ENST00000590499 AKR1C3P42330 323 aa7.69□□□□□ -1.18
SMAD4-211ENST00000590499 SULT1A2P50226 295 aa7.69□□□□□ -1.18
SMAD4-211ENST00000590499 RAB5CP51148 216 aa7.69□□□□□ -1.18
SMAD4-211ENST00000590499 UBE2G1P62253 170 aa7.69□□□□□ -1.18
SMAD4-211ENST00000590499 CCL20P78556 96 aa7.69□□□□□ -1.18
SMAD4-211ENST00000590499 MRPL23Q16540 153 aaKnown RBP7.69□□□□□ -1.18
SMAD4-211ENST00000590499 ZNF674Q2M3X9 581 aa7.69□□□□□ -1.18
SMAD4-211ENST00000590499 ZNF876PQ49A33 203 aa7.69□□□□□ -1.18
SMAD4-211ENST00000590499 ZNF506Q5JVG8 444 aa7.69□□□□□ -1.18
SMAD4-211ENST00000590499 DNLZQ5SXM8 178 aa7.69□□□□□ -1.18
SMAD4-211ENST00000590499 C1orf134Q5TEV5 83 aa7.69□□□□□ -1.18
SMAD4-211ENST00000590499 AKAP14Q86UN6 197 aa7.69□□□□□ -1.18
SMAD4-211ENST00000590499 SLC51BQ86UW2 128 aa7.69□□□□□ -1.18
SMAD4-211ENST00000590499 KRBOX1C9JBD0 128 aa7.68□□□□□ -1.18
SMAD4-211ENST00000590499 C9JCJ5 164 aa7.68□□□□□ -1.18
SMAD4-211ENST00000590499 SH2D1AO60880 128 aa7.68□□□□□ -1.18
SMAD4-211ENST00000590499 GYPEP15421 78 aa7.68□□□□□ -1.18
SMAD4-211ENST00000590499 GATA1P15976 413 aaPredicted RBP7.68□□□□□ -1.18
SMAD4-211ENST00000590499 SOHLH1Q5JUK2 328 aa7.68□□□□□ -1.18
SMAD4-211ENST00000590499 PIK3CD-AS1Q5SR53 167 aa7.68□□□□□ -1.18
SMAD4-211ENST00000590499 FAM162BQ5T6X4 162 aa7.68□□□□□ -1.18
SMAD4-211ENST00000590499 CFAP126Q5VTH2 177 aa7.68□□□□□ -1.18
SMAD4-211ENST00000590499 EIF5AL1Q6IS14 154 aaKnown RBP7.68□□□□□ -1.18
SMAD4-211ENST00000590499 LYPD5Q6UWN5 251 aa7.68□□□□□ -1.18
SMAD4-211ENST00000590499 C9orf62Q8N4C0 152 aa7.68□□□□□ -1.18
SMAD4-211ENST00000590499 IL36BQ9NZH7 164 aa7.68□□□□□ -1.18
SMAD4-211ENST00000590499 B4DEV8 164 aa7.67□□□□□ -1.18
SMAD4-211ENST00000590499 ZNF561-AS1K7EIQ3 104 aa7.67□□□□□ -1.18
SMAD4-211ENST00000590499 ORM1P02763 201 aa7.67□□□□□ -1.18
SMAD4-211ENST00000590499 S100A9P06702 114 aaKnown RBP7.67□□□□□ -1.18
SMAD4-211ENST00000590499 ASIPP42127 132 aa7.67□□□□□ -1.18
SMAD4-211ENST00000590499 NEGR1Q7Z3B1 354 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms