RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 IGLV2-11P01706 119 aa12.04□□□□□ -0.48
PRKCSH-211ENST00000590098 MGST1P10620 155 aaKnown RBP12.04□□□□□ -0.48
PRKCSH-211ENST00000590098 ZNF506Q5JVG8 444 aa12.04□□□□□ -0.48
PRKCSH-211ENST00000590098 LELP1Q5T871 98 aa12.04□□□□□ -0.48
PRKCSH-211ENST00000590098 TMEM75Q8N9X5 138 aa12.04□□□□□ -0.48
PRKCSH-211ENST00000590098 PTH2Q96A98 100 aa12.04□□□□□ -0.48
PRKCSH-211ENST00000590098 MED28Q9H204 178 aa12.04□□□□□ -0.48
PRKCSH-211ENST00000590098 TNFSF18Q9UNG2 199 aa12.04□□□□□ -0.48
PRKCSH-211ENST00000590098 LRCOL1A6NCL2 159 aa12.03□□□□□ -0.48
PRKCSH-211ENST00000590098 GGTLC3B5MD39 225 aa12.03□□□□□ -0.48
PRKCSH-211ENST00000590098 IGHV3-30P01768 117 aa12.03□□□□□ -0.48
PRKCSH-211ENST00000590098 IGHV3-33P01772 117 aa12.03□□□□□ -0.48
PRKCSH-211ENST00000590098 IGHV3-30-3P0DP02 117 aa12.03□□□□□ -0.48
PRKCSH-211ENST00000590098 IGHV3-30-5P0DP03 117 aa12.03□□□□□ -0.48
PRKCSH-211ENST00000590098 ATP6V0E2Q8NHE4 81 aa12.03□□□□□ -0.48
PRKCSH-211ENST00000590098 NTN5Q8WTR8 489 aaPredicted RBP12.03□□□□□ -0.48
PRKCSH-211ENST00000590098 GTSF1LQ9H1H1 148 aa12.03□□□□□ -0.48
PRKCSH-211ENST00000590098 S100A4P26447 101 aaKnown RBP12.02□□□□□ -0.49
PRKCSH-211ENST00000590098 SH3BGRL3Q9H299 93 aa12.02□□□□□ -0.49
PRKCSH-211ENST00000590098 SMR3BP02814 79 aaPredicted RBP12.01□□□□□ -0.49
PRKCSH-211ENST00000590098 RNASE3P12724 160 aaKnown RBP12.01□□□□□ -0.49
PRKCSH-211ENST00000590098 INO80EQ8NBZ0 244 aaPredicted RBP12.01□□□□□ -0.49
PRKCSH-211ENST00000590098 A0A1W2PRE2 83 aa12□□□□□ -0.49
PRKCSH-211ENST00000590098 A8MWV9 139 aa12□□□□□ -0.49
PRKCSH-211ENST00000590098 IFNA7P01567 189 aa12□□□□□ -0.49
PRKCSH-211ENST00000590098 LGALSLQ3ZCW2 172 aaPredicted RBP12□□□□□ -0.49
PRKCSH-211ENST00000590098 Q8N814 137 aa12□□□□□ -0.49
PRKCSH-211ENST00000590098 BORCS7-ASMTA0A0B4J1R7 106 aa11.99□□□□□ -0.49
PRKCSH-211ENST00000590098 TRAV34A0A0B4J273 112 aa11.99□□□□□ -0.49
PRKCSH-211ENST00000590098 FABP5P3A8MUU1 101 aa11.99□□□□□ -0.49
PRKCSH-211ENST00000590098 FAM229AH3BQW9 127 aa11.99□□□□□ -0.49
PRKCSH-211ENST00000590098 PTTG1O95997 202 aa11.99□□□□□ -0.49
PRKCSH-211ENST00000590098 ASIPP42127 132 aa11.99□□□□□ -0.49
PRKCSH-211ENST00000590098 LAGE3Q14657 143 aa11.99□□□□□ -0.49
PRKCSH-211ENST00000590098 PIK3CD-AS1Q5SR53 167 aa11.99□□□□□ -0.49
PRKCSH-211ENST00000590098 ZFP2Q6ZN57 461 aa11.99□□□□□ -0.49
PRKCSH-211ENST00000590098 LINC00479Q96M42 142 aa11.99□□□□□ -0.49
PRKCSH-211ENST00000590098 TMEM70Q9BUB7 260 aa11.99□□□□□ -0.49
PRKCSH-211ENST00000590098 TM2D2Q9BX73 214 aa11.99□□□□□ -0.49
PRKCSH-211ENST00000590098 PARLQ9H300 379 aa11.99□□□□□ -0.49
PRKCSH-211ENST00000590098 DNAH8Q96JB1 4490 aa11.98□□□□□ -0.49
PRKCSH-211ENST00000590098 IGKV3D-20A0A0C4DH25 116 aa11.98□□□□□ -0.49
PRKCSH-211ENST00000590098 GAGE12JA6NER3 117 aa11.98□□□□□ -0.49
PRKCSH-211ENST00000590098 GAGE1Q13065 139 aa11.98□□□□□ -0.49
PRKCSH-211ENST00000590098 GAGE4Q13068 117 aa11.98□□□□□ -0.49
PRKCSH-211ENST00000590098 GAGE5Q13069 117 aa11.98□□□□□ -0.49
PRKCSH-211ENST00000590098 GAGE13Q4V321 117 aa11.98□□□□□ -0.49
PRKCSH-211ENST00000590098 RPL7L1Q6DKI1 246 aaKnown RBP11.98□□□□□ -0.49
PRKCSH-211ENST00000590098 ARL2-SNX15V9GYD0 113 aa11.98□□□□□ -0.49
PRKCSH-211ENST00000590098 GIPP09681 153 aaPredicted RBP11.97□□□□□ -0.49
PRKCSH-211ENST00000590098 HAMPP81172 84 aa11.97□□□□□ -0.49
PRKCSH-211ENST00000590098 Q5BKY6 102 aa11.97□□□□□ -0.49
PRKCSH-211ENST00000590098 Q6ZSN1 163 aa11.97□□□□□ -0.49
PRKCSH-211ENST00000590098 CTXND1A0A1B0GTU2 59 aa11.96□□□□□ -0.49
PRKCSH-211ENST00000590098 B4DEV8 164 aa11.96□□□□□ -0.49
PRKCSH-211ENST00000590098 PEX7O00628 323 aa11.96□□□□□ -0.49
PRKCSH-211ENST00000590098 UBE2G2P60604 165 aa11.96□□□□□ -0.49
PRKCSH-211ENST00000590098 OR2T35Q8NGX2 323 aa11.96□□□□□ -0.49
PRKCSH-211ENST00000590098 NKX6-2Q9C056 277 aaPredicted RBP11.96□□□□□ -0.49
PRKCSH-211ENST00000590098 BATF3Q9NR55 127 aa11.96□□□□□ -0.49
PRKCSH-211ENST00000590098 MYCBP2O75592 4640 aa11.96□□□□□ -0.5
PRKCSH-211ENST00000590098 FLG2Q5D862 2391 aaPredicted RBP11.95□□□□□ -0.5
PRKCSH-211ENST00000590098 FXYD6-FXYD2A0A087WZ82 144 aa11.95□□□□□ -0.5
PRKCSH-211ENST00000590098 FGF8P55075 233 aaPredicted RBP11.95□□□□□ -0.5
PRKCSH-211ENST00000590098 SYT8Q8NBV8 401 aa11.95□□□□□ -0.5
PRKCSH-211ENST00000590098 IL36BQ9NZH7 164 aa11.95□□□□□ -0.5
PRKCSH-211ENST00000590098 A0A087WWC5 75 aa11.94□□□□□ -0.5
PRKCSH-211ENST00000590098 TRAV8-3A0A0A6YYJ7 113 aa11.94□□□□□ -0.5
PRKCSH-211ENST00000590098 ZNF726P1Q15940 193 aa11.94□□□□□ -0.5
PRKCSH-211ENST00000590098 TOR2AQ5JU69 321 aa11.94□□□□□ -0.5
PRKCSH-211ENST00000590098 Q86TA4 180 aa11.94□□□□□ -0.5
PRKCSH-211ENST00000590098 HIST1H2BAQ96A08 127 aa11.94□□□□□ -0.5
PRKCSH-211ENST00000590098 RNF222A6NCQ9 220 aa11.93□□□□□ -0.5
PRKCSH-211ENST00000590098 H3BVH4 76 aa11.93□□□□□ -0.5
PRKCSH-211ENST00000590098 AKR1C8PQ5T2L2 129 aa11.93□□□□□ -0.5
PRKCSH-211ENST00000590098 DMRTA1Q5VZB9 504 aa11.93□□□□□ -0.5
PRKCSH-211ENST00000590098 Q8N3U1 123 aa11.93□□□□□ -0.5
PRKCSH-211ENST00000590098 JPT2Q9H910 190 aa11.93□□□□□ -0.5
PRKCSH-211ENST00000590098 FAM74A7A6NL05 159 aa11.92□□□□□ -0.5
PRKCSH-211ENST00000590098 M0R036 132 aa11.92□□□□□ -0.5
PRKCSH-211ENST00000590098 RHODO00212 210 aa11.92□□□□□ -0.5
PRKCSH-211ENST00000590098 LINC00694P0DN24 101 aa11.92□□□□□ -0.5
PRKCSH-211ENST00000590098 C14orf178Q8N769 122 aaPredicted RBP11.92□□□□□ -0.5
PRKCSH-211ENST00000590098 OR11H4Q8NGC9 324 aa11.92□□□□□ -0.5
PRKCSH-211ENST00000590098 SAMD10Q9BYL1 202 aa11.92□□□□□ -0.5
PRKCSH-211ENST00000590098 ZFP30Q9Y2G7 519 aa11.92□□□□□ -0.5
PRKCSH-211ENST00000590098 URGCP-MRPS24S4R325 110 aa11.92□□□□□ -0.5
PRKCSH-211ENST00000590098 KRBOX1C9JBD0 128 aa11.91□□□□□ -0.5
PRKCSH-211ENST00000590098 C1QBP02746 253 aa11.91□□□□□ -0.5
PRKCSH-211ENST00000590098 ARMS2P0C7Q2 107 aa11.91□□□□□ -0.5
PRKCSH-211ENST00000590098 DNLZQ5SXM8 178 aa11.91□□□□□ -0.5
PRKCSH-211ENST00000590098 UFSP1Q6NVU6 142 aa11.91□□□□□ -0.5
PRKCSH-211ENST00000590098 DAZ4Q86SG3 579 aaKnown RBP11.91□□□□□ -0.5
PRKCSH-211ENST00000590098 ZC2HC1AQ96GY0 325 aa11.91□□□□□ -0.5
PRKCSH-211ENST00000590098 DAZ3Q9NR90 486 aaKnown RBP11.91□□□□□ -0.5
PRKCSH-211ENST00000590098 Q9UF83 564 aa11.91□□□□□ -0.5
PRKCSH-211ENST00000590098 GRIFINA4D1Z8 144 aa11.9□□□□□ -0.5
PRKCSH-211ENST00000590098 CRIP1P50238 77 aa11.9□□□□□ -0.5
PRKCSH-211ENST00000590098 UBE2G1P62253 170 aa11.9□□□□□ -0.5
PRKCSH-211ENST00000590098 FAM162BQ5T6X4 162 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 154.2 ms