RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 WWC2-AS2Q96NR7 200 aa9.71□□□□□ -0.86
VMP1-210ENST00000589823 TPPP3Q9BW30 176 aa9.71□□□□□ -0.86
VMP1-210ENST00000589823 MRPL16Q9NX20 251 aaKnown RBP9.71□□□□□ -0.86
VMP1-210ENST00000589823 PHLDA3Q9Y5J5 127 aa9.71□□□□□ -0.86
VMP1-210ENST00000589823 TRGV2A0A075B6R0 118 aa9.7□□□□□ -0.86
VMP1-210ENST00000589823 A8MWL6 223 aa9.7□□□□□ -0.86
VMP1-210ENST00000589823 C12orf74Q32Q52 190 aa9.7□□□□□ -0.86
VMP1-210ENST00000589823 ZNF876PQ49A33 203 aa9.7□□□□□ -0.86
VMP1-210ENST00000589823 CT83Q5H943 113 aa9.7□□□□□ -0.86
VMP1-210ENST00000589823 FER1L6-AS1Q8NA97 138 aa9.7□□□□□ -0.86
VMP1-210ENST00000589823 SYT8Q8NBV8 401 aa9.7□□□□□ -0.86
VMP1-210ENST00000589823 STAB2Q8WWQ8 2551 aa9.69□□□□□ -0.86
VMP1-210ENST00000589823 TGP01266 2768 aa9.69□□□□□ -0.86
VMP1-210ENST00000589823 A0A1W2PPQ1 181 aa9.69□□□□□ -0.86
VMP1-210ENST00000589823 PPP1R2P9O14990 202 aa9.69□□□□□ -0.86
VMP1-210ENST00000589823 Q6ZTC4 211 aa9.69□□□□□ -0.86
VMP1-210ENST00000589823 LINC00612Q8N6U2 182 aa9.69□□□□□ -0.86
VMP1-210ENST00000589823 RASL10AQ92737 203 aa9.69□□□□□ -0.86
VMP1-210ENST00000589823 PTH2Q96A98 100 aa9.69□□□□□ -0.86
VMP1-210ENST00000589823 F2Z2F3 143 aa9.68□□□□□ -0.86
VMP1-210ENST00000589823 M0R381 172 aa9.68□□□□□ -0.86
VMP1-210ENST00000589823 SNAI2O43623 268 aa9.68□□□□□ -0.86
VMP1-210ENST00000589823 MT-ND4LP03901 98 aa9.68□□□□□ -0.86
VMP1-210ENST00000589823 OR5AL1P0C617 328 aa9.68□□□□□ -0.86
VMP1-210ENST00000589823 IGLC6P0CF74 106 aa9.68□□□□□ -0.86
VMP1-210ENST00000589823 C10orf91Q5T1B1 145 aa9.68□□□□□ -0.86
VMP1-210ENST00000589823 SPANXN1Q5VSR9 72 aa9.68□□□□□ -0.86
VMP1-210ENST00000589823 SLC7A5P1Q8MH63 180 aa9.68□□□□□ -0.86
VMP1-210ENST00000589823 ZFP82Q8N141 532 aa9.68□□□□□ -0.86
VMP1-210ENST00000589823 TSKUQ8WUA8 353 aa9.68□□□□□ -0.86
VMP1-210ENST00000589823 NDUFAF3Q9BU61 184 aa9.68□□□□□ -0.86
VMP1-210ENST00000589823 SCRT2Q9NQ03 307 aa9.68□□□□□ -0.86
VMP1-210ENST00000589823 CARHSP1Q9Y2V2 147 aaKnown RBP9.68□□□□□ -0.86
VMP1-210ENST00000589823 V9GYV3 84 aa9.68□□□□□ -0.86
VMP1-210ENST00000589823 DNAH7Q8WXX0 4024 aa9.67□□□□□ -0.86
VMP1-210ENST00000589823 ATP5G1P05496 136 aa9.67□□□□□ -0.86
VMP1-210ENST00000589823 PIK3CD-AS1Q5SR53 167 aa9.67□□□□□ -0.86
VMP1-210ENST00000589823 C18orf15Q96N68 181 aa9.67□□□□□ -0.86
VMP1-210ENST00000589823 SSBP4Q9BWG4 385 aaPredicted RBP9.67□□□□□ -0.86
VMP1-210ENST00000589823 TRAV10A0A0B4J240 114 aa9.66□□□□□ -0.86
VMP1-210ENST00000589823 FAM231BA6NCW3 169 aa9.66□□□□□ -0.86
VMP1-210ENST00000589823 HTN3P15516 51 aa9.66□□□□□ -0.86
VMP1-210ENST00000589823 CACNG7P62955 275 aa9.66□□□□□ -0.86
VMP1-210ENST00000589823 RNF212Q495C1 297 aa9.66□□□□□ -0.86
VMP1-210ENST00000589823 DMRTA1Q5VZB9 504 aa9.66□□□□□ -0.86
VMP1-210ENST00000589823 LYZL1Q6UWQ5 148 aa9.66□□□□□ -0.86
VMP1-210ENST00000589823 OR10AG1Q8NH19 301 aa9.66□□□□□ -0.86
VMP1-210ENST00000589823 MUC7Q8TAX7 377 aa9.66□□□□□ -0.86
VMP1-210ENST00000589823 PHLDA1Q8WV24 401 aaPredicted RBP9.66□□□□□ -0.86
VMP1-210ENST00000589823 ANAPC16Q96DE5 110 aa9.66□□□□□ -0.86
VMP1-210ENST00000589823 GFRA4Q9GZZ7 299 aa9.66□□□□□ -0.86
VMP1-210ENST00000589823 TRAV4A0A0B4J268 109 aa9.65□□□□□ -0.86
VMP1-210ENST00000589823 MUC21A0A0G2JKD1 596 aa9.65□□□□□ -0.86
VMP1-210ENST00000589823 MUC21A0A140T8X8 626 aa9.65□□□□□ -0.86
VMP1-210ENST00000589823 A8MWV9 139 aa9.65□□□□□ -0.86
VMP1-210ENST00000589823 SSTP61278 116 aa9.65□□□□□ -0.86
VMP1-210ENST00000589823 OR4C5Q8NGB2 326 aa9.65□□□□□ -0.86
VMP1-210ENST00000589823 GTSF1Q8WW33 167 aa9.65□□□□□ -0.86
VMP1-210ENST00000589823 BORCS7Q96B45 105 aa9.65□□□□□ -0.86
VMP1-210ENST00000589823 DEFB131BA0A096LNP1 70 aa9.64□□□□□ -0.87
VMP1-210ENST00000589823 HIGD1CA8MV81 97 aa9.64□□□□□ -0.87
VMP1-210ENST00000589823 F5H768 121 aa9.64□□□□□ -0.87
VMP1-210ENST00000589823 RS1O15537 224 aa9.64□□□□□ -0.87
VMP1-210ENST00000589823 IGHV3-53P01767 116 aa9.64□□□□□ -0.87
VMP1-210ENST00000589823 APOC3P02656 99 aa9.64□□□□□ -0.87
VMP1-210ENST00000589823 CTRLP40313 264 aa9.64□□□□□ -0.87
VMP1-210ENST00000589823 FOXA3P55318 350 aaPredicted RBP9.64□□□□□ -0.87
VMP1-210ENST00000589823 WDR73Q6P4I2 378 aa9.64□□□□□ -0.87
VMP1-210ENST00000589823 PGLYRP4Q96LB8 373 aa9.64□□□□□ -0.87
VMP1-210ENST00000589823 CIDEAO60543 219 aa9.63□□□□□ -0.87
VMP1-210ENST00000589823 NXPH4O95158 308 aa9.63□□□□□ -0.87
VMP1-210ENST00000589823 CFAP126Q5VTH2 177 aa9.63□□□□□ -0.87
VMP1-210ENST00000589823 SVBPQ8N300 66 aa9.63□□□□□ -0.87
VMP1-210ENST00000589823 CLRN3Q8NCR9 226 aa9.63□□□□□ -0.87
VMP1-210ENST00000589823 NAT8BQ9UHF3 227 aa9.63□□□□□ -0.87
VMP1-210ENST00000589823 TRGV4A0A0C4DH28 118 aa9.62□□□□□ -0.87
VMP1-210ENST00000589823 SMIM27A0A1W2PRY6 76 aa9.62□□□□□ -0.87
VMP1-210ENST00000589823 NUPR2A6NF83 97 aa9.62□□□□□ -0.87
VMP1-210ENST00000589823 RHEBQ15382 184 aa9.62□□□□□ -0.87
VMP1-210ENST00000589823 CEMP1Q6PRD7 247 aaPredicted RBP9.62□□□□□ -0.87
VMP1-210ENST00000589823 ZNF479Q96JC4 524 aa9.62□□□□□ -0.87
VMP1-210ENST00000589823 AP1S3Q96PC3 154 aa9.62□□□□□ -0.87
VMP1-210ENST00000589823 CTDSP1Q9GZU7 261 aa9.62□□□□□ -0.87
VMP1-210ENST00000589823 JPT2Q9H910 190 aa9.62□□□□□ -0.87
VMP1-210ENST00000589823 MUC4Q99102 2169 aa9.62□□□□□ -0.87
VMP1-210ENST00000589823 IGHV4-4A0A075B6R2 117 aa9.61□□□□□ -0.87
VMP1-210ENST00000589823 RHODO00212 210 aa9.61□□□□□ -0.87
VMP1-210ENST00000589823 SNAPINO95295 136 aa9.61□□□□□ -0.87
VMP1-210ENST00000589823 TRGC1P0CF51 173 aa9.61□□□□□ -0.87
VMP1-210ENST00000589823 SMIM17P0DL12 118 aa9.61□□□□□ -0.87
VMP1-210ENST00000589823 NTF3P20783 257 aa9.61□□□□□ -0.87
VMP1-210ENST00000589823 SLAQ13239 276 aa9.61□□□□□ -0.87
VMP1-210ENST00000589823 TWIST1Q15672 202 aa9.61□□□□□ -0.87
VMP1-210ENST00000589823 ZFAND6Q6FIF0 208 aa9.61□□□□□ -0.87
VMP1-210ENST00000589823 POM121L12Q8N7R1 296 aa9.61□□□□□ -0.87
VMP1-210ENST00000589823 NUP35Q8NFH5 326 aa9.61□□□□□ -0.87
VMP1-210ENST00000589823 CNFNQ9BYD5 112 aa9.61□□□□□ -0.87
VMP1-210ENST00000589823 KLK5Q9Y337 293 aaPredicted RBP9.61□□□□□ -0.87
VMP1-210ENST00000589823 A0A087WWL8 130 aa9.6□□□□□ -0.87
VMP1-210ENST00000589823 A0A1B0GUT8 65 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 143.8 ms