RNA–Protein interactions for RNA: ENST00000589706.1

SMAD4-208, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-208ENST00000589706 IFI27L1Q96BM0 104 aa4.44□□□□□ -1.7
SMAD4-208ENST00000589706 TIMD4Q96H15 378 aa4.44□□□□□ -1.7
SMAD4-208ENST00000589706 IMMP1LQ96LU5 166 aa4.44□□□□□ -1.7
SMAD4-208ENST00000589706 DEFB127Q9H1M4 99 aa4.44□□□□□ -1.7
SMAD4-208ENST00000589706 FAM215AQ9Y5M1 114 aa4.44□□□□□ -1.7
SMAD4-208ENST00000589706 TENM1Q9UKZ4 2725 aa4.44□□□□□ -1.7
SMAD4-208ENST00000589706 CR1P17927 2039 aa4.43□□□□□ -1.7
SMAD4-208ENST00000589706 TRBV7-3A0A075B6L6 115 aa4.43□□□□□ -1.7
SMAD4-208ENST00000589706 IGKV1-8A0A0C4DH67 115 aa4.43□□□□□ -1.7
SMAD4-208ENST00000589706 HIGD1CA8MV81 97 aa4.43□□□□□ -1.7
SMAD4-208ENST00000589706 IGKV1-39P01597 117 aa4.43□□□□□ -1.7
SMAD4-208ENST00000589706 IGKV1D-16P01601 117 aa4.43□□□□□ -1.7
SMAD4-208ENST00000589706 TRACP01848 142 aa4.43□□□□□ -1.7
SMAD4-208ENST00000589706 HBDP02042 147 aa4.43□□□□□ -1.7
SMAD4-208ENST00000589706 IGKV1D-39P04432 117 aa4.43□□□□□ -1.7
SMAD4-208ENST00000589706 GP9P14770 177 aa4.43□□□□□ -1.7
SMAD4-208ENST00000589706 COX7CP15954 63 aa4.43□□□□□ -1.7
SMAD4-208ENST00000589706 CXCL5P42830 114 aa4.43□□□□□ -1.7
SMAD4-208ENST00000589706 PSMB2P49721 201 aa4.43□□□□□ -1.7
SMAD4-208ENST00000589706 CACNG7P62955 275 aa4.43□□□□□ -1.7
SMAD4-208ENST00000589706 PLGLB1Q02325 96 aa4.43□□□□□ -1.7
SMAD4-208ENST00000589706 FAM53BQ14153 422 aa4.43□□□□□ -1.7
SMAD4-208ENST00000589706 FBXL19-AS1Q494R0 122 aa4.43□□□□□ -1.7
SMAD4-208ENST00000589706 AMN1Q8IY45 258 aa4.43□□□□□ -1.7
SMAD4-208ENST00000589706 ABHD12Q8N2K0 398 aa4.43□□□□□ -1.7
SMAD4-208ENST00000589706 ANKRD29Q8N6D5 301 aa4.43□□□□□ -1.7
SMAD4-208ENST00000589706 DPH3Q96FX2 82 aa4.43□□□□□ -1.7
SMAD4-208ENST00000589706 FAM218AQ96MZ4 157 aa4.43□□□□□ -1.7
SMAD4-208ENST00000589706 RPP21Q9H633 154 aaKnown RBP4.43□□□□□ -1.7
SMAD4-208ENST00000589706 ZNF442Q9H7R0 627 aa4.43□□□□□ -1.7
SMAD4-208ENST00000589706 EDA2RQ9HAV5 297 aa4.43□□□□□ -1.7
SMAD4-208ENST00000589706 DNAJC13O75165 2243 aa4.42□□□□□ -1.7
SMAD4-208ENST00000589706 IGLV3-12A0A075B6K2 115 aa4.42□□□□□ -1.7
SMAD4-208ENST00000589706 NDUFC2-KCTD14E9PQ53 114 aa4.42□□□□□ -1.7
SMAD4-208ENST00000589706 OVOL1O14753 267 aa4.42□□□□□ -1.7
SMAD4-208ENST00000589706 DSCAMO60469 2012 aa4.42□□□□□ -1.7
SMAD4-208ENST00000589706 DPM2O94777 84 aa4.42□□□□□ -1.7
SMAD4-208ENST00000589706 P0C879 139 aa4.42□□□□□ -1.7
SMAD4-208ENST00000589706 FOXA3P55318 350 aaPredicted RBP4.42□□□□□ -1.7
SMAD4-208ENST00000589706 EDDM3BP56851 147 aa4.42□□□□□ -1.7
SMAD4-208ENST00000589706 RIGQ13278 110 aa4.42□□□□□ -1.7
SMAD4-208ENST00000589706 EBI3Q14213 229 aa4.42□□□□□ -1.7
SMAD4-208ENST00000589706 TMEM170BQ5T4T1 132 aa4.42□□□□□ -1.7
SMAD4-208ENST00000589706 LINC00596Q86U02 117 aa4.42□□□□□ -1.7
SMAD4-208ENST00000589706 Q8N9P0 234 aaPredicted RBP4.42□□□□□ -1.7
SMAD4-208ENST00000589706 PLEKHB2Q96CS7 222 aa4.42□□□□□ -1.7
SMAD4-208ENST00000589706 PRAC1Q96KF2 57 aa4.42□□□□□ -1.7
SMAD4-208ENST00000589706 ZNF488Q96MN9 340 aa4.42□□□□□ -1.7
SMAD4-208ENST00000589706 ODF3Q96PU9 254 aa4.42□□□□□ -1.7
SMAD4-208ENST00000589706 HIST1H4GQ99525 98 aa4.42□□□□□ -1.7
SMAD4-208ENST00000589706 TRGV9Q99603 122 aa4.42□□□□□ -1.7
SMAD4-208ENST00000589706 MRPL20Q9BYC9 149 aaKnown RBP4.42□□□□□ -1.7
SMAD4-208ENST00000589706 PLEKHA3Q9HB20 300 aa4.42□□□□□ -1.7
SMAD4-208ENST00000589706 ZNF355PQ9NSJ1 428 aa4.42□□□□□ -1.7
SMAD4-208ENST00000589706 F11RQ9Y624 299 aaKnown RBP4.42□□□□□ -1.7
SMAD4-208ENST00000589706 IGHV3OR15-7A0A075B7D8 119 aa4.41□□□□□ -1.7
SMAD4-208ENST00000589706 IGKV1D-13A0A0B4J2D9 117 aa4.41□□□□□ -1.7
SMAD4-208ENST00000589706 IGHV3-20A0A0C4DH32 117 aa4.41□□□□□ -1.7
SMAD4-208ENST00000589706 A0A1W2PQD3 144 aa4.41□□□□□ -1.7
SMAD4-208ENST00000589706 ATOX1O00244 68 aa4.41□□□□□ -1.7
SMAD4-208ENST00000589706 SLC25A20O43772 301 aa4.41□□□□□ -1.7
SMAD4-208ENST00000589706 IGKCP01834 107 aa4.41□□□□□ -1.7
SMAD4-208ENST00000589706 CD7P09564 240 aa4.41□□□□□ -1.7
SMAD4-208ENST00000589706 IGKV1-13P0DP09 117 aa4.41□□□□□ -1.7
SMAD4-208ENST00000589706 UBE2D1P51668 147 aa4.41□□□□□ -1.7
SMAD4-208ENST00000589706 FBXW4P57775 412 aa4.41□□□□□ -1.7
SMAD4-208ENST00000589706 DEFB121Q5J5C9 76 aa4.41□□□□□ -1.7
SMAD4-208ENST00000589706 Q5XG85 94 aa4.41□□□□□ -1.7
SMAD4-208ENST00000589706 FAM53AQ6NSI3 398 aaPredicted RBP4.41□□□□□ -1.7
SMAD4-208ENST00000589706 Q6ZR03 302 aa4.41□□□□□ -1.7
SMAD4-208ENST00000589706 ZNF493Q6ZR52 646 aa4.41□□□□□ -1.7
SMAD4-208ENST00000589706 SLC25A48Q6ZT89 311 aaKnown RBP4.41□□□□□ -1.7
SMAD4-208ENST00000589706 GOLT1AQ6ZVE7 132 aa4.41□□□□□ -1.7
SMAD4-208ENST00000589706 FGFRL1Q8N441 504 aa4.41□□□□□ -1.7
SMAD4-208ENST00000589706 TMEM86BQ8N661 226 aa4.41□□□□□ -1.7
SMAD4-208ENST00000589706 POM121L12Q8N7R1 296 aa4.41□□□□□ -1.7
SMAD4-208ENST00000589706 C3orf56Q8N813 242 aa4.41□□□□□ -1.7
SMAD4-208ENST00000589706 OR8A1Q8NGG7 326 aa4.41□□□□□ -1.7
SMAD4-208ENST00000589706 RFESDQ8TAC1 157 aa4.41□□□□□ -1.7
SMAD4-208ENST00000589706 FLVCR1-AS1Q8TAF5 88 aa4.41□□□□□ -1.7
SMAD4-208ENST00000589706 BORCS8Q96FH0 119 aa4.41□□□□□ -1.7
SMAD4-208ENST00000589706 DCTN5Q9BTE1 182 aa4.41□□□□□ -1.7
SMAD4-208ENST00000589706 JPT2Q9H910 190 aa4.41□□□□□ -1.7
SMAD4-208ENST00000589706 EPDR1Q9UM22 224 aa4.41□□□□□ -1.7
SMAD4-208ENST00000589706 HHLA3Q9XRX5 114 aa4.41□□□□□ -1.7
SMAD4-208ENST00000589706 KLF13Q9Y2Y9 288 aaPredicted RBP4.41□□□□□ -1.7
SMAD4-208ENST00000589706 ZNF407Q9C0G0 2248 aa4.41□□□□□ -1.7
SMAD4-208ENST00000589706 A0A087WW49 117 aa4.4□□□□□ -1.71
SMAD4-208ENST00000589706 LINC01546A6NGU7 62 aa4.4□□□□□ -1.71
SMAD4-208ENST00000589706 FRG2CA6NGY1 282 aa4.4□□□□□ -1.71
SMAD4-208ENST00000589706 NCBP2LA6PVI3 153 aaKnown RBP4.4□□□□□ -1.71
SMAD4-208ENST00000589706 OOSP1A8MZH6 123 aa4.4□□□□□ -1.71
SMAD4-208ENST00000589706 LGALS9O00182 355 aa4.4□□□□□ -1.71
SMAD4-208ENST00000589706 NBR2O15453 112 aa4.4□□□□□ -1.71
SMAD4-208ENST00000589706 CT62P0C5K7 136 aa4.4□□□□□ -1.71
SMAD4-208ENST00000589706 Q6ZQT7 251 aa4.4□□□□□ -1.71
SMAD4-208ENST00000589706 APRG1Q8IVJ8 170 aa4.4□□□□□ -1.71
SMAD4-208ENST00000589706 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.4□□□□□ -1.71
SMAD4-208ENST00000589706 MGST2Q99735 147 aa4.4□□□□□ -1.71
SMAD4-208ENST00000589706 CHCHD5Q9BSY4 110 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms