RNA–Protein interactions for RNA: ENST00000589140.1

SEPT9-223, Transcript of septin 9, human

TSL 4

Gene SEPT9, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEPT9-223	ENST00000589140	IGKV3D-20	A0A0C4DH25	116 aa		13.27	□□□□□ -0.29
SEPT9-223	ENST00000589140	PEX7	O00628	323 aa		13.27	□□□□□ -0.29
SEPT9-223	ENST00000589140	CRYGD	P07320	174 aa		13.27	□□□□□ -0.29
SEPT9-223	ENST00000589140	UBE2G2	P60604	165 aa		13.27	□□□□□ -0.29
SEPT9-223	ENST00000589140	AKR1C8P	Q5T2L2	129 aa		13.27	□□□□□ -0.29
SEPT9-223	ENST00000589140	ARL2-SNX15	V9GYD0	113 aa		13.27	□□□□□ -0.29
SEPT9-223	ENST00000589140		A0A087WTM6	91 aa		13.26	□□□□□ -0.29
SEPT9-223	ENST00000589140	IGHV3-73	A0A0B4J1V6	119 aa		13.26	□□□□□ -0.29
SEPT9-223	ENST00000589140	IGHV3-38	A0A0C4DH36	116 aa		13.26	□□□□□ -0.29
SEPT9-223	ENST00000589140	FAM74A7	A6NL05	159 aa		13.26	□□□□□ -0.29
SEPT9-223	ENST00000589140	FABP5P3	A8MUU1	101 aa		13.26	□□□□□ -0.29
SEPT9-223	ENST00000589140	FGF8	P55075	233 aa	Predicted RBP	13.26	□□□□□ -0.29
SEPT9-223	ENST00000589140	RGS21	Q2M5E4	152 aa		13.26	□□□□□ -0.29
SEPT9-223	ENST00000589140	CDPF1	Q6NVV7	123 aa		13.26	□□□□□ -0.29
SEPT9-223	ENST00000589140	ARPC5	O15511	151 aa		13.25	□□□□□ -0.29
SEPT9-223	ENST00000589140	MGST1	P10620	155 aa	Known RBP	13.25	□□□□□ -0.29
SEPT9-223	ENST00000589140	FUS	P35637	526 aa	Known RBP eCLIP	13.25	□□□□□ -0.29
SEPT9-223	ENST00000589140		Q86TA4	180 aa		13.25	□□□□□ -0.29
SEPT9-223	ENST00000589140	HIST1H2BA	Q96A08	127 aa		13.25	□□□□□ -0.29
SEPT9-223	ENST00000589140	CYTL1	Q9NRR1	136 aa		13.25	□□□□□ -0.29
SEPT9-223	ENST00000589140	BOLA1	Q9Y3E2	137 aa		13.25	□□□□□ -0.29
SEPT9-223	ENST00000589140	S100A4	P26447	101 aa	Known RBP	13.24	□□□□□ -0.29
SEPT9-223	ENST00000589140	LINC01556	Q5JQF7	62 aa		13.24	□□□□□ -0.29
SEPT9-223	ENST00000589140	PIK3CD-AS1	Q5SR53	167 aa		13.24	□□□□□ -0.29
SEPT9-223	ENST00000589140	SCRT2	Q9NQ03	307 aa		13.24	□□□□□ -0.29
SEPT9-223	ENST00000589140	TRAV8-6	A0A0B4J262	113 aa		13.23	□□□□□ -0.29
SEPT9-223	ENST00000589140	MAP1LC3B2	A6NCE7	125 aa		13.23	□□□□□ -0.29
SEPT9-223	ENST00000589140		A8MWV9	139 aa		13.23	□□□□□ -0.29
SEPT9-223	ENST00000589140	MAP1LC3B	Q9GZQ8	125 aa		13.23	□□□□□ -0.29
SEPT9-223	ENST00000589140	FAT1	Q14517	4588 aa		13.22	□□□□□ -0.29
SEPT9-223	ENST00000589140	ASIP	P42127	132 aa		13.22	□□□□□ -0.29
SEPT9-223	ENST00000589140	OR10J3	Q5JRS4	329 aa		13.22	□□□□□ -0.29
SEPT9-223	ENST00000589140	LELP1	Q5T871	98 aa		13.22	□□□□□ -0.29
SEPT9-223	ENST00000589140	ZFP2	Q6ZN57	461 aa		13.22	□□□□□ -0.29
SEPT9-223	ENST00000589140	COX8C	Q7Z4L0	72 aa		13.22	□□□□□ -0.29
SEPT9-223	ENST00000589140	PARL	Q9H300	379 aa		13.22	□□□□□ -0.29
SEPT9-223	ENST00000589140	IL36B	Q9NZH7	164 aa		13.22	□□□□□ -0.29
SEPT9-223	ENST00000589140	CRIP1	P50238	77 aa		13.21	□□□□□ -0.29
SEPT9-223	ENST00000589140		Q6ZSN1	163 aa		13.21	□□□□□ -0.29
SEPT9-223	ENST00000589140	ATP6V0E2	Q8NHE4	81 aa		13.21	□□□□□ -0.29
SEPT9-223	ENST00000589140	ZC2HC1A	Q96GY0	325 aa		13.21	□□□□□ -0.29
SEPT9-223	ENST00000589140	GTSF1L	Q9H1H1	148 aa		13.21	□□□□□ -0.29
SEPT9-223	ENST00000589140	ZFP30	Q9Y2G7	519 aa		13.21	□□□□□ -0.29
SEPT9-223	ENST00000589140	IBA57-AS1	B1ANH7	110 aa		13.2	□□□□□ -0.3
SEPT9-223	ENST00000589140		B4DEV8	164 aa		13.2	□□□□□ -0.3
SEPT9-223	ENST00000589140	LGALSL	Q3ZCW2	172 aa	Predicted RBP	13.2	□□□□□ -0.3
SEPT9-223	ENST00000589140	DNLZ	Q5SXM8	178 aa		13.2	□□□□□ -0.3
SEPT9-223	ENST00000589140	STOML3	Q8TAV4	291 aa		13.2	□□□□□ -0.3
SEPT9-223	ENST00000589140	FMC1	Q96HJ9	113 aa		13.2	□□□□□ -0.3
SEPT9-223	ENST00000589140	KRBOX1	C9JBD0	128 aa		13.19	□□□□□ -0.3
SEPT9-223	ENST00000589140	FHIT	P49789	147 aa		13.19	□□□□□ -0.3
SEPT9-223	ENST00000589140	TCEAL7	Q9BRU2	100 aa		13.19	□□□□□ -0.3
SEPT9-223	ENST00000589140	TRBV6-1	A0A0K0K1D8	114 aa		13.18	□□□□□ -0.3
SEPT9-223	ENST00000589140	SMLR1	H3BR10	107 aa		13.18	□□□□□ -0.3
SEPT9-223	ENST00000589140		H3BVH4	76 aa		13.18	□□□□□ -0.3
SEPT9-223	ENST00000589140	SH2D1A	O60880	128 aa		13.18	□□□□□ -0.3
SEPT9-223	ENST00000589140	UBE2G1	P62253	170 aa		13.18	□□□□□ -0.3
SEPT9-223	ENST00000589140	KCNRG	Q8N5I3	272 aa		13.18	□□□□□ -0.3
SEPT9-223	ENST00000589140		M0R036	132 aa		13.17	□□□□□ -0.3
SEPT9-223	ENST00000589140	PSCA	O43653	123 aa		13.17	□□□□□ -0.3
SEPT9-223	ENST00000589140	ARMS2	P0C7Q2	107 aa		13.17	□□□□□ -0.3
SEPT9-223	ENST00000589140	LINC00694	P0DN24	101 aa		13.17	□□□□□ -0.3
SEPT9-223	ENST00000589140	ZNF345	Q14585	488 aa		13.17	□□□□□ -0.3
SEPT9-223	ENST00000589140	FAM162B	Q5T6X4	162 aa		13.17	□□□□□ -0.3
SEPT9-223	ENST00000589140	DMRTA1	Q5VZB9	504 aa		13.17	□□□□□ -0.3
SEPT9-223	ENST00000589140	CST9LP1	Q5W188	147 aa		13.17	□□□□□ -0.3
SEPT9-223	ENST00000589140	UFSP1	Q6NVU6	142 aa		13.17	□□□□□ -0.3
SEPT9-223	ENST00000589140	SYT8	Q8NBV8	401 aa		13.17	□□□□□ -0.3
SEPT9-223	ENST00000589140	SAMD10	Q9BYL1	202 aa		13.17	□□□□□ -0.3
SEPT9-223	ENST00000589140	JPT2	Q9H910	190 aa		13.17	□□□□□ -0.3
SEPT9-223	ENST00000589140	DNAH8	Q96JB1	4490 aa		13.17	□□□□□ -0.3
SEPT9-223	ENST00000589140	GAGE12J	A6NER3	117 aa		13.16	□□□□□ -0.3
SEPT9-223	ENST00000589140	IGHV3-30	P01768	117 aa		13.16	□□□□□ -0.3
SEPT9-223	ENST00000589140	IGHV3-33	P01772	117 aa		13.16	□□□□□ -0.3
SEPT9-223	ENST00000589140	IGHV3-30-3	P0DP02	117 aa		13.16	□□□□□ -0.3
SEPT9-223	ENST00000589140	IGHV3-30-5	P0DP03	117 aa		13.16	□□□□□ -0.3
SEPT9-223	ENST00000589140	XG	P55808	180 aa		13.16	□□□□□ -0.3
SEPT9-223	ENST00000589140	KRTAP10-1	P60331	282 aa		13.16	□□□□□ -0.3
SEPT9-223	ENST00000589140	GAGE1	Q13065	139 aa		13.16	□□□□□ -0.3
SEPT9-223	ENST00000589140	GAGE4	Q13068	117 aa		13.16	□□□□□ -0.3
SEPT9-223	ENST00000589140	GAGE5	Q13069	117 aa		13.16	□□□□□ -0.3
SEPT9-223	ENST00000589140	ZNF674	Q2M3X9	581 aa		13.16	□□□□□ -0.3
SEPT9-223	ENST00000589140	GAGE13	Q4V321	117 aa		13.16	□□□□□ -0.3
SEPT9-223	ENST00000589140	GRIFIN	A4D1Z8	144 aa		13.15	□□□□□ -0.3
SEPT9-223	ENST00000589140	LRCOL1	A6NCL2	159 aa		13.15	□□□□□ -0.3
SEPT9-223	ENST00000589140	RHOD	O00212	210 aa		13.15	□□□□□ -0.3
SEPT9-223	ENST00000589140	LTA	P01374	205 aa		13.15	□□□□□ -0.3
SEPT9-223	ENST00000589140	OR11H4	Q8NGC9	324 aa		13.15	□□□□□ -0.3
SEPT9-223	ENST00000589140		Q9HAA7	133 aa		13.15	□□□□□ -0.3
SEPT9-223	ENST00000589140	SEC11B	P0C7V7	166 aa		13.14	□□□□□ -0.31
SEPT9-223	ENST00000589140	AKR1C3	P42330	323 aa		13.14	□□□□□ -0.31
SEPT9-223	ENST00000589140	LAGE3	Q14657	143 aa		13.14	□□□□□ -0.31
SEPT9-223	ENST00000589140	LINC01559	Q495D7	138 aa		13.14	□□□□□ -0.31
SEPT9-223	ENST00000589140	C14orf178	Q8N769	122 aa	Predicted RBP	13.14	□□□□□ -0.31
SEPT9-223	ENST00000589140	MBD3L1	Q8WWY6	194 aa		13.14	□□□□□ -0.31
SEPT9-223	ENST00000589140		Q9UF83	564 aa		13.14	□□□□□ -0.31
SEPT9-223	ENST00000589140	HMSD	A8MTL9	139 aa		13.13	□□□□□ -0.31
SEPT9-223	ENST00000589140	UMAD1	C9J7I0	102 aa		13.13	□□□□□ -0.31
SEPT9-223	ENST00000589140	PAGE4	O60829	102 aa		13.13	□□□□□ -0.31
SEPT9-223	ENST00000589140	GCSH	P23434	173 aa		13.13	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms