RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 MUC21A0A140T8X8 626 aa7.57□□□□□ -1.2
SMARCA4-213ENST00000587988 GATCO43716 136 aaKnown RBP7.57□□□□□ -1.2
SMARCA4-213ENST00000587988 PHLDA1Q8WV24 401 aaPredicted RBP7.57□□□□□ -1.2
SMARCA4-213ENST00000587988 RASL10AQ92737 203 aa7.57□□□□□ -1.2
SMARCA4-213ENST00000587988 SCRT2Q9NQ03 307 aa7.57□□□□□ -1.2
SMARCA4-213ENST00000587988 OSTCQ9NRP0 149 aa7.57□□□□□ -1.2
SMARCA4-213ENST00000587988 TRGV2A0A075B6R0 118 aa7.56□□□□□ -1.2
SMARCA4-213ENST00000587988 DEFB131BA0A096LNP1 70 aa7.56□□□□□ -1.2
SMARCA4-213ENST00000587988 F8W036 122 aa7.56□□□□□ -1.2
SMARCA4-213ENST00000587988 SNAI2O43623 268 aa7.56□□□□□ -1.2
SMARCA4-213ENST00000587988 IGHV3-53P01767 116 aa7.56□□□□□ -1.2
SMARCA4-213ENST00000587988 IGLC6P0CF74 106 aa7.56□□□□□ -1.2
SMARCA4-213ENST00000587988 MED14OSP0DP75 135 aa7.56□□□□□ -1.2
SMARCA4-213ENST00000587988 HTN3P15516 51 aa7.56□□□□□ -1.2
SMARCA4-213ENST00000587988 RPS20P60866 119 aaKnown RBP7.56□□□□□ -1.2
SMARCA4-213ENST00000587988 ZNF876PQ49A33 203 aa7.56□□□□□ -1.2
SMARCA4-213ENST00000587988 DMRTA1Q5VZB9 504 aa7.56□□□□□ -1.2
SMARCA4-213ENST00000587988 POM121L12Q8N7R1 296 aa7.56□□□□□ -1.2
SMARCA4-213ENST00000587988 OR10AG1Q8NH19 301 aa7.56□□□□□ -1.2
SMARCA4-213ENST00000587988 SFRP2Q96HF1 295 aa7.56□□□□□ -1.2
SMARCA4-213ENST00000587988 SSBP4Q9BWG4 385 aaPredicted RBP7.56□□□□□ -1.2
SMARCA4-213ENST00000587988 V9GYV3 84 aa7.56□□□□□ -1.2
SMARCA4-213ENST00000587988 TRAV10A0A0B4J240 114 aa7.55□□□□□ -1.2
SMARCA4-213ENST00000587988 FER1L6-AS1Q8NA97 138 aa7.55□□□□□ -1.2
SMARCA4-213ENST00000587988 OR10G8Q8NGN5 311 aa7.55□□□□□ -1.2
SMARCA4-213ENST00000587988 GTSF1Q8WW33 167 aa7.55□□□□□ -1.2
SMARCA4-213ENST00000587988 PTH2Q96A98 100 aa7.55□□□□□ -1.2
SMARCA4-213ENST00000587988 C18orf15Q96N68 181 aa7.55□□□□□ -1.2
SMARCA4-213ENST00000587988 SEC11CQ9BY50 192 aa7.55□□□□□ -1.2
SMARCA4-213ENST00000587988 JPT2Q9H910 190 aa7.55□□□□□ -1.2
SMARCA4-213ENST00000587988 PHLDA3Q9Y5J5 127 aa7.55□□□□□ -1.2
SMARCA4-213ENST00000587988 XKRY2A2RUG3 117 aa7.54□□□□□ -1.2
SMARCA4-213ENST00000587988 M0R381 172 aa7.54□□□□□ -1.2
SMARCA4-213ENST00000587988 ATP5G1P05496 136 aa7.54□□□□□ -1.2
SMARCA4-213ENST00000587988 OR5AL1P0C617 328 aa7.54□□□□□ -1.2
SMARCA4-213ENST00000587988 HOXA5P20719 270 aa7.54□□□□□ -1.2
SMARCA4-213ENST00000587988 SSTP61278 116 aa7.54□□□□□ -1.2
SMARCA4-213ENST00000587988 CEMP1Q6PRD7 247 aaPredicted RBP7.54□□□□□ -1.2
SMARCA4-213ENST00000587988 LYZL1Q6UWQ5 148 aa7.54□□□□□ -1.2
SMARCA4-213ENST00000587988 SLC7A5P1Q8MH63 180 aa7.54□□□□□ -1.2
SMARCA4-213ENST00000587988 C15orf54Q8N8G6 183 aa7.54□□□□□ -1.2
SMARCA4-213ENST00000587988 ZNF479Q96JC4 524 aa7.54□□□□□ -1.2
SMARCA4-213ENST00000587988 TPPP3Q9BW30 176 aa7.54□□□□□ -1.2
SMARCA4-213ENST00000587988 NACAE9PAV3 2078 aa7.54□□□□□ -1.2
SMARCA4-213ENST00000587988 CSMD3Q7Z407 3707 aa7.53□□□□□ -1.2
SMARCA4-213ENST00000587988 TRAV4A0A0B4J268 109 aa7.53□□□□□ -1.2
SMARCA4-213ENST00000587988 A8MWL6 223 aa7.53□□□□□ -1.2
SMARCA4-213ENST00000587988 F5H768 121 aa7.53□□□□□ -1.2
SMARCA4-213ENST00000587988 C3orf84H3BNL1 204 aa7.53□□□□□ -1.2
SMARCA4-213ENST00000587988 RS1O15537 224 aa7.53□□□□□ -1.2
SMARCA4-213ENST00000587988 NXPH4O95158 308 aa7.53□□□□□ -1.2
SMARCA4-213ENST00000587988 PNRC1Q12796 327 aaPredicted RBP7.53□□□□□ -1.2
SMARCA4-213ENST00000587988 RNF212Q495C1 297 aa7.53□□□□□ -1.2
SMARCA4-213ENST00000587988 CT83Q5H943 113 aa7.53□□□□□ -1.2
SMARCA4-213ENST00000587988 C10orf91Q5T1B1 145 aa7.53□□□□□ -1.2
SMARCA4-213ENST00000587988 CASC10Q5T4H9 136 aa7.53□□□□□ -1.2
SMARCA4-213ENST00000587988 CFAP126Q5VTH2 177 aa7.53□□□□□ -1.2
SMARCA4-213ENST00000587988 SAMD10Q9BYL1 202 aa7.53□□□□□ -1.2
SMARCA4-213ENST00000587988 IGHV3-73A0A0B4J1V6 119 aa7.52□□□□□ -1.21
SMARCA4-213ENST00000587988 A0A1W2PPQ1 181 aa7.52□□□□□ -1.21
SMARCA4-213ENST00000587988 NUPR2A6NF83 97 aa7.52□□□□□ -1.21
SMARCA4-213ENST00000587988 FHL2Q14192 279 aa7.52□□□□□ -1.21
SMARCA4-213ENST00000587988 PIK3CD-AS1Q5SR53 167 aa7.52□□□□□ -1.21
SMARCA4-213ENST00000587988 SPANXN1Q5VSR9 72 aa7.52□□□□□ -1.21
SMARCA4-213ENST00000587988 ZFP82Q8N141 532 aa7.52□□□□□ -1.21
SMARCA4-213ENST00000587988 SYT8Q8NBV8 401 aa7.52□□□□□ -1.21
SMARCA4-213ENST00000587988 OR4C5Q8NGB2 326 aa7.52□□□□□ -1.21
SMARCA4-213ENST00000587988 TSKUQ8WUA8 353 aa7.52□□□□□ -1.21
SMARCA4-213ENST00000587988 PGLYRP4Q96LB8 373 aa7.52□□□□□ -1.21
SMARCA4-213ENST00000587988 MSRB1Q9NZV6 116 aa7.52□□□□□ -1.21
SMARCA4-213ENST00000587988 IGLL5B9A064 214 aa7.51□□□□□ -1.21
SMARCA4-213ENST00000587988 F2Z2F3 143 aa7.51□□□□□ -1.21
SMARCA4-213ENST00000587988 NTF3P20783 257 aa7.51□□□□□ -1.21
SMARCA4-213ENST00000587988 CTRLP40313 264 aa7.51□□□□□ -1.21
SMARCA4-213ENST00000587988 FOXA3P55318 350 aaPredicted RBP7.51□□□□□ -1.21
SMARCA4-213ENST00000587988 UFSP1Q6NVU6 142 aa7.51□□□□□ -1.21
SMARCA4-213ENST00000587988 TMEM88Q6PEY1 159 aa7.51□□□□□ -1.21
SMARCA4-213ENST00000587988 NDUFAF3Q9BU61 184 aa7.51□□□□□ -1.21
SMARCA4-213ENST00000587988 CARHSP1Q9Y2V2 147 aaKnown RBP7.51□□□□□ -1.21
SMARCA4-213ENST00000587988 STARD9Q9P2P6 4700 aa7.51□□□□□ -1.21
SMARCA4-213ENST00000587988 IGHV4-4A0A075B6R2 117 aa7.5□□□□□ -1.21
SMARCA4-213ENST00000587988 A0A087WWL8 130 aa7.5□□□□□ -1.21
SMARCA4-213ENST00000587988 TRGV4A0A0C4DH28 118 aa7.5□□□□□ -1.21
SMARCA4-213ENST00000587988 A0A0J9YY99 117 aa7.5□□□□□ -1.21
SMARCA4-213ENST00000587988 HIGD1CA8MV81 97 aa7.5□□□□□ -1.21
SMARCA4-213ENST00000587988 A8MWV9 139 aa7.5□□□□□ -1.21
SMARCA4-213ENST00000587988 CRYGDP07320 174 aa7.5□□□□□ -1.21
SMARCA4-213ENST00000587988 CACNG7P62955 275 aa7.5□□□□□ -1.21
SMARCA4-213ENST00000587988 Q6ZSN1 163 aa7.5□□□□□ -1.21
SMARCA4-213ENST00000587988 NUP35Q8NFH5 326 aa7.5□□□□□ -1.21
SMARCA4-213ENST00000587988 VSIG2Q96IQ7 327 aa7.5□□□□□ -1.21
SMARCA4-213ENST00000587988 CNFNQ9BYD5 112 aa7.5□□□□□ -1.21
SMARCA4-213ENST00000587988 GFRA4Q9GZZ7 299 aa7.5□□□□□ -1.21
SMARCA4-213ENST00000587988 KLK5Q9Y337 293 aaPredicted RBP7.5□□□□□ -1.21
SMARCA4-213ENST00000587988 DYNC2H1Q8NCM8 4307 aaKnown RBP7.5□□□□□ -1.21
SMARCA4-213ENST00000587988 TRAV26-1A0A087WT03 109 aa7.49□□□□□ -1.21
SMARCA4-213ENST00000587988 SMIM27A0A1W2PRY6 76 aa7.49□□□□□ -1.21
SMARCA4-213ENST00000587988 FAM231BA6NCW3 169 aa7.49□□□□□ -1.21
SMARCA4-213ENST00000587988 FAM74A4Q5TZK3 123 aa7.49□□□□□ -1.21
SMARCA4-213ENST00000587988 WDR73Q6P4I2 378 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms