RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 A0A087WTM6 91 aa7.88□□□□□ -1.15
LIG3-207ENST00000586119 PEX7O00628 323 aa7.88□□□□□ -1.15
LIG3-207ENST00000586119 NDUFS6O75380 124 aaKnown RBP7.88□□□□□ -1.15
LIG3-207ENST00000586119 S100A9P06702 114 aaKnown RBP7.88□□□□□ -1.15
LIG3-207ENST00000586119 GPX1P07203 203 aa7.88□□□□□ -1.15
LIG3-207ENST00000586119 BCL2P10415 239 aa7.88□□□□□ -1.15
LIG3-207ENST00000586119 CRISP2P16562 243 aa7.88□□□□□ -1.15
LIG3-207ENST00000586119 CRYBA4P53673 196 aa7.88□□□□□ -1.15
LIG3-207ENST00000586119 UQCC3Q6UW78 93 aa7.88□□□□□ -1.15
LIG3-207ENST00000586119 GOLT1AQ6ZVE7 132 aa7.88□□□□□ -1.15
LIG3-207ENST00000586119 TMEM75Q8N9X5 138 aa7.88□□□□□ -1.15
LIG3-207ENST00000586119 LINC00467Q9BRT7 94 aa7.88□□□□□ -1.15
LIG3-207ENST00000586119 ZNF492Q9P255 531 aa7.88□□□□□ -1.15
LIG3-207ENST00000586119 VAX2Q9UIW0 290 aa7.88□□□□□ -1.15
LIG3-207ENST00000586119 HHLA3Q9XRX5 114 aa7.88□□□□□ -1.15
LIG3-207ENST00000586119 TRBV6-1A0A0K0K1D8 114 aa7.87□□□□□ -1.15
LIG3-207ENST00000586119 PDE6DO43924 150 aa7.87□□□□□ -1.15
LIG3-207ENST00000586119 SFTA3P0C7M3 94 aa7.87□□□□□ -1.15
LIG3-207ENST00000586119 ERVFC1-1P60608 527 aa7.87□□□□□ -1.15
LIG3-207ENST00000586119 GNG5P63218 68 aa7.87□□□□□ -1.15
LIG3-207ENST00000586119 MEF2BQ02080 365 aaPredicted RBP7.87□□□□□ -1.15
LIG3-207ENST00000586119 SMUG1Q53HV7 270 aa7.87□□□□□ -1.15
LIG3-207ENST00000586119 WFDC10BQ8IUB3 73 aa7.87□□□□□ -1.15
LIG3-207ENST00000586119 NDFIP1Q9BT67 221 aa7.87□□□□□ -1.15
LIG3-207ENST00000586119 PRO0255Q9UI72 69 aa7.87□□□□□ -1.15
LIG3-207ENST00000586119 RPH3ALQ9UNE2 315 aa7.87□□□□□ -1.15
LIG3-207ENST00000586119 DMBT1Q9UGM3 2413 aaPredicted RBP7.86□□□□□ -1.15
LIG3-207ENST00000586119 IGHV1OR15-1A0A075B7D0 117 aa7.86□□□□□ -1.15
LIG3-207ENST00000586119 MUC21Q5SSG8 566 aa7.86□□□□□ -1.15
LIG3-207ENST00000586119 SAPCD1Q5SSQ6 148 aa7.86□□□□□ -1.15
LIG3-207ENST00000586119 Q8TAT8 98 aa7.86□□□□□ -1.15
LIG3-207ENST00000586119 C11orf52Q96A22 123 aa7.86□□□□□ -1.15
LIG3-207ENST00000586119 ZNF479Q96JC4 524 aa7.86□□□□□ -1.15
LIG3-207ENST00000586119 RBFOX3A6NFN3 312 aa7.85□□□□□ -1.15
LIG3-207ENST00000586119 EREGO14944 169 aa7.85□□□□□ -1.15
LIG3-207ENST00000586119 IGLV2-11P01706 119 aa7.85□□□□□ -1.15
LIG3-207ENST00000586119 FLI1Q01543 452 aaPredicted RBP7.85□□□□□ -1.15
LIG3-207ENST00000586119 TMEM183BQ1AE95 376 aa7.85□□□□□ -1.15
LIG3-207ENST00000586119 ZNF506Q5JVG8 444 aa7.85□□□□□ -1.15
LIG3-207ENST00000586119 IBA57Q5T440 356 aaKnown RBP7.85□□□□□ -1.15
LIG3-207ENST00000586119 FMC1Q96HJ9 113 aa7.85□□□□□ -1.15
LIG3-207ENST00000586119 PSG8Q9UQ74 426 aa7.85□□□□□ -1.15
LIG3-207ENST00000586119 ZFP30Q9Y2G7 519 aa7.85□□□□□ -1.15
LIG3-207ENST00000586119 LOC100131303A0A0U1RQF7 123 aa7.84□□□□□ -1.15
LIG3-207ENST00000586119 RAB19A4D1S5 217 aa7.84□□□□□ -1.15
LIG3-207ENST00000586119 K7EQD1 137 aa7.84□□□□□ -1.15
LIG3-207ENST00000586119 AKR1C3P42330 323 aa7.84□□□□□ -1.15
LIG3-207ENST00000586119 UBE2G1P62253 170 aa7.84□□□□□ -1.15
LIG3-207ENST00000586119 MRPL23Q16540 153 aaKnown RBP7.84□□□□□ -1.15
LIG3-207ENST00000586119 NEGR1Q7Z3B1 354 aa7.84□□□□□ -1.15
LIG3-207ENST00000586119 SMDT1Q9H4I9 107 aa7.84□□□□□ -1.15
LIG3-207ENST00000586119 MSRB1Q9NZV6 116 aa7.84□□□□□ -1.15
LIG3-207ENST00000586119 LY96Q9Y6Y9 160 aa7.84□□□□□ -1.15
LIG3-207ENST00000586119 TRAV8-1A0A0A6YYK1 113 aa7.83□□□□□ -1.16
LIG3-207ENST00000586119 TRGV4A0A0C4DH28 118 aa7.83□□□□□ -1.16
LIG3-207ENST00000586119 SCO2A0A1W2PP80 73 aa7.83□□□□□ -1.16
LIG3-207ENST00000586119 TMEM250H0YL14 139 aa7.83□□□□□ -1.16
LIG3-207ENST00000586119 GYPEP15421 78 aa7.83□□□□□ -1.16
LIG3-207ENST00000586119 CDPF1Q6NVV7 123 aa7.83□□□□□ -1.16
LIG3-207ENST00000586119 PRNTQ86SH4 94 aa7.83□□□□□ -1.16
LIG3-207ENST00000586119 FRZBQ92765 325 aa7.83□□□□□ -1.16
LIG3-207ENST00000586119 TREM1Q9NP99 234 aa7.83□□□□□ -1.16
LIG3-207ENST00000586119 GCSHP23434 173 aa7.82□□□□□ -1.16
LIG3-207ENST00000586119 PEA15Q15121 130 aa7.82□□□□□ -1.16
LIG3-207ENST00000586119 COX8CQ7Z4L0 72 aa7.82□□□□□ -1.16
LIG3-207ENST00000586119 Q86TA4 180 aa7.82□□□□□ -1.16
LIG3-207ENST00000586119 NFE4Q86UQ8 179 aa7.82□□□□□ -1.16
LIG3-207ENST00000586119 SMIM12Q96EX1 92 aa7.82□□□□□ -1.16
LIG3-207ENST00000586119 LINC00479Q96M42 142 aa7.82□□□□□ -1.16
LIG3-207ENST00000586119 EIF5A2Q9GZV4 153 aaKnown RBP7.82□□□□□ -1.16
LIG3-207ENST00000586119 TRAV34A0A0B4J273 112 aa7.81□□□□□ -1.16
LIG3-207ENST00000586119 TRAV21A0A0B4J279 112 aa7.81□□□□□ -1.16
LIG3-207ENST00000586119 LRCOL1A6NCL2 159 aa7.81□□□□□ -1.16
LIG3-207ENST00000586119 GNRH2O43555 120 aa7.81□□□□□ -1.16
LIG3-207ENST00000586119 LTAP01374 205 aa7.81□□□□□ -1.16
LIG3-207ENST00000586119 SRIP30626 198 aa7.81□□□□□ -1.16
LIG3-207ENST00000586119 ZNF415Q09FC8 603 aa7.81□□□□□ -1.16
LIG3-207ENST00000586119 SLAQ13239 276 aa7.81□□□□□ -1.16
LIG3-207ENST00000586119 Q6AWC8 147 aa7.81□□□□□ -1.16
LIG3-207ENST00000586119 TMEM183AQ8IXX5 376 aa7.81□□□□□ -1.16
LIG3-207ENST00000586119 PCNPQ8WW12 178 aaKnown RBP7.81□□□□□ -1.16
LIG3-207ENST00000586119 TVP23CQ96ET8 276 aa7.81□□□□□ -1.16
LIG3-207ENST00000586119 SGK494Q96LW2 274 aa7.81□□□□□ -1.16
LIG3-207ENST00000586119 FAM30AQ9NZY2 134 aa7.81□□□□□ -1.16
LIG3-207ENST00000586119 SRRM2Q9UQ35 2752 aaKnown RBP7.81□□□□□ -1.16
LIG3-207ENST00000586119 TRAV9-2A0A087WT02 112 aa7.8□□□□□ -1.16
LIG3-207ENST00000586119 IGHV3-16A0A0C4DH30 117 aa7.8□□□□□ -1.16
LIG3-207ENST00000586119 SCO1O75880 301 aa7.8□□□□□ -1.16
LIG3-207ENST00000586119 RPL35P42766 123 aaKnown RBP7.8□□□□□ -1.16
LIG3-207ENST00000586119 BAGE2Q86Y30 109 aa7.8□□□□□ -1.16
LIG3-207ENST00000586119 RASL10AQ92737 203 aa7.8□□□□□ -1.16
LIG3-207ENST00000586119 CRYGDP07320 174 aa7.79□□□□□ -1.16
LIG3-207ENST00000586119 EVI2AP22794 236 aa7.79□□□□□ -1.16
LIG3-207ENST00000586119 SVBPQ8N300 66 aa7.79□□□□□ -1.16
LIG3-207ENST00000586119 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.79□□□□□ -1.16
LIG3-207ENST00000586119 CLRN3Q8NCR9 226 aa7.79□□□□□ -1.16
LIG3-207ENST00000586119 MLST8Q9BVC4 326 aa7.79□□□□□ -1.16
LIG3-207ENST00000586119 BIN3Q9NQY0 253 aa7.79□□□□□ -1.16
LIG3-207ENST00000586119 FABP5P3A8MUU1 101 aa7.78□□□□□ -1.16
LIG3-207ENST00000586119 C9JCJ5 164 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms