RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 SYT8Q8NBV8 401 aa9.23□□□□□ -0.93
VMP1-202ENST00000585847 NAGKQ9UJ70 344 aa9.23□□□□□ -0.93
VMP1-202ENST00000585847 TMSB15BA0A087X1C1 80 aa9.22□□□□□ -0.93
VMP1-202ENST00000585847 CRXO43186 299 aaPredicted RBP9.22□□□□□ -0.93
VMP1-202ENST00000585847 IGKV3-20P01619 116 aa9.22□□□□□ -0.93
VMP1-202ENST00000585847 APCSP02743 223 aa9.22□□□□□ -0.93
VMP1-202ENST00000585847 PPBPP02775 128 aa9.22□□□□□ -0.93
VMP1-202ENST00000585847 LYZL1Q6UWQ5 148 aa9.22□□□□□ -0.93
VMP1-202ENST00000585847 WWC2-AS2Q96NR7 200 aa9.22□□□□□ -0.93
VMP1-202ENST00000585847 TPPP3Q9BW30 176 aa9.22□□□□□ -0.93
VMP1-202ENST00000585847 TMEM191AQ9H0A3 160 aa9.22□□□□□ -0.93
VMP1-202ENST00000585847 C11orf21Q9P2W6 132 aa9.22□□□□□ -0.93
VMP1-202ENST00000585847 LAMTOR2Q9Y2Q5 125 aa9.22□□□□□ -0.93
VMP1-202ENST00000585847 PHLDA3Q9Y5J5 127 aa9.22□□□□□ -0.93
VMP1-202ENST00000585847 UBE2CO00762 179 aa9.21□□□□□ -0.94
VMP1-202ENST00000585847 TRGC2P03986 189 aa9.21□□□□□ -0.94
VMP1-202ENST00000585847 S100A6P06703 90 aa9.21□□□□□ -0.94
VMP1-202ENST00000585847 RAB4BP61018 213 aa9.21□□□□□ -0.94
VMP1-202ENST00000585847 ZNF415Q09FC8 603 aa9.21□□□□□ -0.94
VMP1-202ENST00000585847 SPANXN1Q5VSR9 72 aa9.21□□□□□ -0.94
VMP1-202ENST00000585847 SBSPONQ8IVN8 264 aa9.21□□□□□ -0.94
VMP1-202ENST00000585847 AP1S3Q96PC3 154 aa9.21□□□□□ -0.94
VMP1-202ENST00000585847 SPXQ9BT56 116 aa9.21□□□□□ -0.94
VMP1-202ENST00000585847 MRPL18Q9H0U6 180 aaKnown RBP9.21□□□□□ -0.94
VMP1-202ENST00000585847 IGHV3-16A0A0C4DH30 117 aa9.2□□□□□ -0.94
VMP1-202ENST00000585847 CBY3A6NI87 242 aa9.2□□□□□ -0.94
VMP1-202ENST00000585847 J3KRW8 73 aa9.2□□□□□ -0.94
VMP1-202ENST00000585847 PPP1R17O96001 155 aa9.2□□□□□ -0.94
VMP1-202ENST00000585847 GIG44P09565 113 aaPredicted RBP9.2□□□□□ -0.94
VMP1-202ENST00000585847 ARMS2P0C7Q2 107 aa9.2□□□□□ -0.94
VMP1-202ENST00000585847 GZMBP10144 247 aa9.2□□□□□ -0.94
VMP1-202ENST00000585847 RPL35AP18077 110 aaKnown RBP9.2□□□□□ -0.94
VMP1-202ENST00000585847 C9orf85Q96MD7 179 aa9.2□□□□□ -0.94
VMP1-202ENST00000585847 TMEM208Q9BTX3 173 aa9.2□□□□□ -0.94
VMP1-202ENST00000585847 TRAV12-2A0A075B6T6 113 aa9.19□□□□□ -0.94
VMP1-202ENST00000585847 LOC102724200A0A096LPH7 203 aaPredicted RBP9.19□□□□□ -0.94
VMP1-202ENST00000585847 SMIM9A6NGZ8 99 aa9.19□□□□□ -0.94
VMP1-202ENST00000585847 H3BVH4 76 aa9.19□□□□□ -0.94
VMP1-202ENST00000585847 PHOX2AO14813 284 aa9.19□□□□□ -0.94
VMP1-202ENST00000585847 CAMPP49913 170 aa9.19□□□□□ -0.94
VMP1-202ENST00000585847 FABP9Q0Z7S8 132 aa9.19□□□□□ -0.94
VMP1-202ENST00000585847 TWIST1Q15672 202 aa9.19□□□□□ -0.94
VMP1-202ENST00000585847 COA6Q5JTJ3 125 aaKnown RBP9.19□□□□□ -0.94
VMP1-202ENST00000585847 CSTL1Q9H114 145 aa9.19□□□□□ -0.94
VMP1-202ENST00000585847 GRIFINA4D1Z8 144 aa9.18□□□□□ -0.94
VMP1-202ENST00000585847 OR10J3Q5JRS4 329 aa9.18□□□□□ -0.94
VMP1-202ENST00000585847 MUC21Q5SSG8 566 aa9.18□□□□□ -0.94
VMP1-202ENST00000585847 TMEM263Q8WUH6 116 aaKnown RBP9.18□□□□□ -0.94
VMP1-202ENST00000585847 LINC01587Q99440 93 aa9.18□□□□□ -0.94
VMP1-202ENST00000585847 B9D2Q9BPU9 175 aa9.18□□□□□ -0.94
VMP1-202ENST00000585847 CIDEAO60543 219 aa9.17□□□□□ -0.94
VMP1-202ENST00000585847 HIST1H2BKO60814 126 aa9.17□□□□□ -0.94
VMP1-202ENST00000585847 HIST1H2BJP06899 126 aa9.17□□□□□ -0.94
VMP1-202ENST00000585847 RNASE3P12724 160 aaKnown RBP9.17□□□□□ -0.94
VMP1-202ENST00000585847 NTF3P20783 257 aa9.17□□□□□ -0.94
VMP1-202ENST00000585847 HIST1H2BOP23527 126 aa9.17□□□□□ -0.94
VMP1-202ENST00000585847 HIST1H2BBP33778 126 aa9.17□□□□□ -0.94
VMP1-202ENST00000585847 HIST1H2BDP58876 126 aa9.17□□□□□ -0.94
VMP1-202ENST00000585847 HIST1H2BCP62807 126 aa9.17□□□□□ -0.94
VMP1-202ENST00000585847 HIST2H2BEQ16778 126 aa9.17□□□□□ -0.94
VMP1-202ENST00000585847 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.17□□□□□ -0.94
VMP1-202ENST00000585847 FAM104BQ5XKR9 115 aa9.17□□□□□ -0.94
VMP1-202ENST00000585847 ZNF705AQ6ZN79 300 aaPredicted RBP9.17□□□□□ -0.94
VMP1-202ENST00000585847 ZNF575Q86XF7 245 aa9.17□□□□□ -0.94
VMP1-202ENST00000585847 HIST1H2BHQ93079 126 aa9.17□□□□□ -0.94
VMP1-202ENST00000585847 MRAP2Q96G30 205 aa9.17□□□□□ -0.94
VMP1-202ENST00000585847 C16orf74Q96GX8 76 aa9.17□□□□□ -0.94
VMP1-202ENST00000585847 HIST1H2BNQ99877 126 aa9.17□□□□□ -0.94
VMP1-202ENST00000585847 HIST1H2BMQ99879 126 aa9.17□□□□□ -0.94
VMP1-202ENST00000585847 SPINK4O60575 86 aa9.16□□□□□ -0.94
VMP1-202ENST00000585847 SMIM17P0DL12 118 aa9.16□□□□□ -0.94
VMP1-202ENST00000585847 Q0VG73 95 aa9.16□□□□□ -0.94
VMP1-202ENST00000585847 KIR3DS1Q14943 382 aa9.16□□□□□ -0.94
VMP1-202ENST00000585847 ORMDL3Q8N138 153 aa9.16□□□□□ -0.94
VMP1-202ENST00000585847 OR10AG1Q8NH19 301 aa9.16□□□□□ -0.94
VMP1-202ENST00000585847 DPH3P1Q9H4G8 78 aa9.16□□□□□ -0.94
VMP1-202ENST00000585847 XCL2Q9UBD3 114 aa9.16□□□□□ -0.94
VMP1-202ENST00000585847 TMA7Q9Y2S6 64 aaKnown RBP9.16□□□□□ -0.94
VMP1-202ENST00000585847 A8MWV9 139 aa9.15□□□□□ -0.94
VMP1-202ENST00000585847 M0R2P5 195 aa9.15□□□□□ -0.94
VMP1-202ENST00000585847 M0R381 172 aa9.15□□□□□ -0.94
VMP1-202ENST00000585847 RHODO00212 210 aa9.15□□□□□ -0.94
VMP1-202ENST00000585847 FXYD7P58549 80 aa9.15□□□□□ -0.94
VMP1-202ENST00000585847 SLAQ13239 276 aa9.15□□□□□ -0.94
VMP1-202ENST00000585847 LGALS9BQ3B8N2 356 aa9.15□□□□□ -0.94
VMP1-202ENST00000585847 Q6ZWC4 215 aa9.15□□□□□ -0.94
VMP1-202ENST00000585847 TM2D3Q9BRN9 247 aa9.15□□□□□ -0.94
VMP1-202ENST00000585847 GSN-AS1Q9NRJ2 163 aa9.15□□□□□ -0.94
VMP1-202ENST00000585847 DAZ2Q13117 558 aaKnown RBP9.14□□□□□ -0.95
VMP1-202ENST00000585847 RRN3P1Q2M238 152 aa9.14□□□□□ -0.95
VMP1-202ENST00000585847 C1orf158Q8N1D5 194 aa9.14□□□□□ -0.95
VMP1-202ENST00000585847 CSNK1G2-AS1Q8NCQ2 148 aa9.14□□□□□ -0.95
VMP1-202ENST00000585847 RETNQ9HD89 108 aa9.14□□□□□ -0.95
VMP1-202ENST00000585847 U3KQK5 164 aa9.14□□□□□ -0.95
VMP1-202ENST00000585847 GNRH2O43555 120 aa9.13□□□□□ -0.95
VMP1-202ENST00000585847 RBMY1A1P0DJD3 496 aaKnown RBP9.13□□□□□ -0.95
VMP1-202ENST00000585847 RBMY1CP0DJD4 496 aa9.13□□□□□ -0.95
VMP1-202ENST00000585847 RBMY1FQ15415 496 aaKnown RBP9.13□□□□□ -0.95
VMP1-202ENST00000585847 POM121L12Q8N7R1 296 aa9.13□□□□□ -0.95
VMP1-202ENST00000585847 IL17DQ8TAD2 202 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms