RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 Q86TA4 180 aa4□□□□□ -1.77
CDH8-213ENST00000584966 C11orf72Q8NBR9 251 aa4□□□□□ -1.77
CDH8-213ENST00000584966 RNASE8Q8TDE3 154 aaKnown RBP4□□□□□ -1.77
CDH8-213ENST00000584966 ZC2HC1AQ96GY0 325 aa4□□□□□ -1.77
CDH8-213ENST00000584966 FMC1Q96HJ9 113 aa4□□□□□ -1.77
CDH8-213ENST00000584966 FAM210AQ96ND0 272 aa4□□□□□ -1.77
CDH8-213ENST00000584966 TXNDC17Q9BRA2 123 aa4□□□□□ -1.77
CDH8-213ENST00000584966 DERL1Q9BUN8 251 aa4□□□□□ -1.77
CDH8-213ENST00000584966 TREM1Q9NP99 234 aa4□□□□□ -1.77
CDH8-213ENST00000584966 VAX2Q9UIW0 290 aa4□□□□□ -1.77
CDH8-213ENST00000584966 DNAH11Q96DT5 4516 aa4□□□□□ -1.77
CDH8-213ENST00000584966 FAT2Q9NYQ8 4349 aa3.99□□□□□ -1.77
CDH8-213ENST00000584966 TRBV20OR9-2A0A075B6H5 130 aa3.99□□□□□ -1.77
CDH8-213ENST00000584966 IGHV1OR15-1A0A075B7D0 117 aa3.99□□□□□ -1.77
CDH8-213ENST00000584966 IGKV3D-20A0A0C4DH25 116 aa3.99□□□□□ -1.77
CDH8-213ENST00000584966 RAB19A4D1S5 217 aa3.99□□□□□ -1.77
CDH8-213ENST00000584966 TEX46H3BTG2 121 aa3.99□□□□□ -1.77
CDH8-213ENST00000584966 K7EQM0 130 aa3.99□□□□□ -1.77
CDH8-213ENST00000584966 GNRH2O43555 120 aa3.99□□□□□ -1.77
CDH8-213ENST00000584966 NDUFS6O75380 124 aaKnown RBP3.99□□□□□ -1.77
CDH8-213ENST00000584966 GCGP01275 180 aa3.99□□□□□ -1.77
CDH8-213ENST00000584966 S100A9P06702 114 aaKnown RBP3.99□□□□□ -1.77
CDH8-213ENST00000584966 RPL35P42766 123 aaKnown RBP3.99□□□□□ -1.77
CDH8-213ENST00000584966 NANOS2P60321 138 aaKnown RBP3.99□□□□□ -1.77
CDH8-213ENST00000584966 RRN3P1Q2M238 152 aa3.99□□□□□ -1.77
CDH8-213ENST00000584966 ZNF674Q2M3X9 581 aa3.99□□□□□ -1.77
CDH8-213ENST00000584966 C12orf74Q32Q52 190 aa3.99□□□□□ -1.77
CDH8-213ENST00000584966 TDRG1Q3Y452 100 aa3.99□□□□□ -1.77
CDH8-213ENST00000584966 SMUG1Q53HV7 270 aa3.99□□□□□ -1.77
CDH8-213ENST00000584966 SAPCD1Q5SSQ6 148 aa3.99□□□□□ -1.77
CDH8-213ENST00000584966 C10orf25Q5T742 122 aa3.99□□□□□ -1.77
CDH8-213ENST00000584966 PET117Q6UWS5 81 aa3.99□□□□□ -1.77
CDH8-213ENST00000584966 TMEM183AQ8IXX5 376 aa3.99□□□□□ -1.77
CDH8-213ENST00000584966 EIF4E3Q8N5X7 224 aaKnown RBP3.99□□□□□ -1.77
CDH8-213ENST00000584966 LINC00612Q8N6U2 182 aa3.99□□□□□ -1.77
CDH8-213ENST00000584966 PYGO2Q9BRQ0 406 aa3.99□□□□□ -1.77
CDH8-213ENST00000584966 NIPSNAP3BQ9BS92 247 aa3.99□□□□□ -1.77
CDH8-213ENST00000584966 KRTAP2-2Q9BYT5 123 aa3.99□□□□□ -1.77
CDH8-213ENST00000584966 ZFP30Q9Y2G7 519 aa3.99□□□□□ -1.77
CDH8-213ENST00000584966 TRAV21A0A0B4J279 112 aa3.98□□□□□ -1.77
CDH8-213ENST00000584966 PDE6DO43924 150 aa3.98□□□□□ -1.77
CDH8-213ENST00000584966 IFNA1P01562 189 aa3.98□□□□□ -1.77
CDH8-213ENST00000584966 TYMSP04818 313 aa3.98□□□□□ -1.77
CDH8-213ENST00000584966 PFN1P07737 140 aaKnown RBP3.98□□□□□ -1.77
CDH8-213ENST00000584966 SRP19P09132 144 aaKnown RBP3.98□□□□□ -1.77
CDH8-213ENST00000584966 VPREB1P12018 145 aa3.98□□□□□ -1.77
CDH8-213ENST00000584966 HTN1P15515 57 aa3.98□□□□□ -1.77
CDH8-213ENST00000584966 TAGLN2P37802 199 aaKnown RBP3.98□□□□□ -1.77
CDH8-213ENST00000584966 AKR1C3P42330 323 aa3.98□□□□□ -1.77
CDH8-213ENST00000584966 MUC21Q5SSG8 566 aa3.98□□□□□ -1.77
CDH8-213ENST00000584966 FAM222AQ5U5X8 452 aa3.98□□□□□ -1.77
CDH8-213ENST00000584966 ZNF493Q6ZR52 646 aa3.98□□□□□ -1.77
CDH8-213ENST00000584966 NHLRC2Q8NBF2 726 aa3.98□□□□□ -1.77
CDH8-213ENST00000584966 MPLKIPQ8TAP9 179 aa3.98□□□□□ -1.77
CDH8-213ENST00000584966 TMEM263Q8WUH6 116 aaKnown RBP3.98□□□□□ -1.77
CDH8-213ENST00000584966 C16orf74Q96GX8 76 aa3.98□□□□□ -1.77
CDH8-213ENST00000584966 TMEM208Q9BTX3 173 aa3.98□□□□□ -1.77
CDH8-213ENST00000584966 MDFICQ9P1T7 246 aa3.98□□□□□ -1.77
CDH8-213ENST00000584966 IGHV3-16A0A0C4DH30 117 aa3.97□□□□□ -1.77
CDH8-213ENST00000584966 TMEM189A5PLL7 270 aa3.97□□□□□ -1.77
CDH8-213ENST00000584966 C19orf71A6NCJ1 209 aa3.97□□□□□ -1.77
CDH8-213ENST00000584966 LYRM9A8MSI8 78 aa3.97□□□□□ -1.77
CDH8-213ENST00000584966 FABP5P3A8MUU1 101 aa3.97□□□□□ -1.77
CDH8-213ENST00000584966 KRBOX1C9JBD0 128 aa3.97□□□□□ -1.77
CDH8-213ENST00000584966 TMEM250H0YL14 139 aa3.97□□□□□ -1.77
CDH8-213ENST00000584966 SPINK4O60575 86 aa3.97□□□□□ -1.77
CDH8-213ENST00000584966 SH2D1AO60880 128 aa3.97□□□□□ -1.77
CDH8-213ENST00000584966 RNASE3P12724 160 aaKnown RBP3.97□□□□□ -1.77
CDH8-213ENST00000584966 EMP1P54849 157 aa3.97□□□□□ -1.77
CDH8-213ENST00000584966 TCL1AP56279 114 aa3.97□□□□□ -1.77
CDH8-213ENST00000584966 UBE2G1P62253 170 aa3.97□□□□□ -1.77
CDH8-213ENST00000584966 DAZ2Q13117 558 aaKnown RBP3.97□□□□□ -1.77
CDH8-213ENST00000584966 CENPWQ5EE01 88 aa3.97□□□□□ -1.77
CDH8-213ENST00000584966 CLLU1Q5K131 121 aa3.97□□□□□ -1.77
CDH8-213ENST00000584966 DNLZQ5SXM8 178 aa3.97□□□□□ -1.77
CDH8-213ENST00000584966 IBA57Q5T440 356 aaKnown RBP3.97□□□□□ -1.77
CDH8-213ENST00000584966 CASC10Q5T4H9 136 aa3.97□□□□□ -1.77
CDH8-213ENST00000584966 LCE1EQ5T753 118 aa3.97□□□□□ -1.77
CDH8-213ENST00000584966 Q6ZTC4 211 aa3.97□□□□□ -1.77
CDH8-213ENST00000584966 ZNF767PQ75MW2 155 aa3.97□□□□□ -1.77
CDH8-213ENST00000584966 BAGE2Q86Y30 109 aa3.97□□□□□ -1.77
CDH8-213ENST00000584966 OCC1Q8TAD7 63 aa3.97□□□□□ -1.77
CDH8-213ENST00000584966 C11orf45Q8TAV5 145 aa3.97□□□□□ -1.77
CDH8-213ENST00000584966 MUC7Q8TAX7 377 aa3.97□□□□□ -1.77
CDH8-213ENST00000584966 NDFIP1Q9BT67 221 aa3.97□□□□□ -1.77
CDH8-213ENST00000584966 PARLQ9H300 379 aa3.97□□□□□ -1.77
CDH8-213ENST00000584966 NOP10Q9NPE3 64 aaKnown RBP3.97□□□□□ -1.77
CDH8-213ENST00000584966 GSN-AS1Q9NRJ2 163 aa3.97□□□□□ -1.77
CDH8-213ENST00000584966 MED9Q9NWA0 146 aa3.97□□□□□ -1.77
CDH8-213ENST00000584966 PKD1P98161 4303 aa3.97□□□□□ -1.77
CDH8-213ENST00000584966 HECTD4Q9Y4D8 3996 aa3.96□□□□□ -1.78
CDH8-213ENST00000584966 C9JCJ5 164 aa3.96□□□□□ -1.78
CDH8-213ENST00000584966 C3orf84H3BNL1 204 aa3.96□□□□□ -1.78
CDH8-213ENST00000584966 K7EN84 100 aa3.96□□□□□ -1.78
CDH8-213ENST00000584966 SPART-AS1P0CW21 52 aa3.96□□□□□ -1.78
CDH8-213ENST00000584966 FAM162BQ5T6X4 162 aa3.96□□□□□ -1.78
CDH8-213ENST00000584966 FAM159AQ6UWV7 190 aa3.96□□□□□ -1.78
CDH8-213ENST00000584966 Q6ZTI0 123 aa3.96□□□□□ -1.78
CDH8-213ENST00000584966 POM121L12Q8N7R1 296 aa3.96□□□□□ -1.78
CDH8-213ENST00000584966 Q8N9P0 234 aaPredicted RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms