RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 A0A1W2PPQ1 181 aa8.38□□□□□ -1.07
CDRT1-207ENST00000583965 SNURFLB1AK76 121 aa8.38□□□□□ -1.07
CDRT1-207ENST00000583965 GNRH2O43555 120 aa8.38□□□□□ -1.07
CDRT1-207ENST00000583965 S100A4P26447 101 aaKnown RBP8.38□□□□□ -1.07
CDRT1-207ENST00000583965 FOXA3P55318 350 aaPredicted RBP8.38□□□□□ -1.07
CDRT1-207ENST00000583965 RPL19P84098 196 aaKnown RBP8.38□□□□□ -1.07
CDRT1-207ENST00000583965 SPXQ9BT56 116 aa8.38□□□□□ -1.07
CDRT1-207ENST00000583965 TIMM8BQ9Y5J9 83 aaPredicted RBP8.38□□□□□ -1.07
CDRT1-207ENST00000583965 HUWE1Q7Z6Z7 4374 aaKnown RBP8.38□□□□□ -1.07
CDRT1-207ENST00000583965 TMSB15BA0A087X1C1 80 aa8.37□□□□□ -1.07
CDRT1-207ENST00000583965 TEX48A0A1B0GUV7 120 aa8.37□□□□□ -1.07
CDRT1-207ENST00000583965 PLAC8L1A1L4L8 177 aa8.37□□□□□ -1.07
CDRT1-207ENST00000583965 MED14OSP0DP75 135 aa8.37□□□□□ -1.07
CDRT1-207ENST00000583965 FAM3BP58499 235 aaPredicted RBP8.37□□□□□ -1.07
CDRT1-207ENST00000583965 DAZ2Q13117 558 aaKnown RBP8.37□□□□□ -1.07
CDRT1-207ENST00000583965 COX19Q49B96 90 aa8.37□□□□□ -1.07
CDRT1-207ENST00000583965 RASL11AQ6T310 242 aa8.37□□□□□ -1.07
CDRT1-207ENST00000583965 ZNF575Q86XF7 245 aa8.37□□□□□ -1.07
CDRT1-207ENST00000583965 IL17DQ8TAD2 202 aa8.37□□□□□ -1.07
CDRT1-207ENST00000583965 GSN-AS1Q9NRJ2 163 aa8.37□□□□□ -1.07
CDRT1-207ENST00000583965 MDFICQ9P1T7 246 aa8.37□□□□□ -1.07
CDRT1-207ENST00000583965 NAT8BQ9UHF3 227 aa8.37□□□□□ -1.07
CDRT1-207ENST00000583965 U3KQK5 164 aa8.37□□□□□ -1.07
CDRT1-207ENST00000583965 LYRM9A8MSI8 78 aa8.36□□□□□ -1.07
CDRT1-207ENST00000583965 RNASE3P12724 160 aaKnown RBP8.36□□□□□ -1.07
CDRT1-207ENST00000583965 ATP5L2Q7Z4Y8 100 aa8.36□□□□□ -1.07
CDRT1-207ENST00000583965 C9orf85Q96MD7 179 aa8.36□□□□□ -1.07
CDRT1-207ENST00000583965 A0A0J9YWU9 116 aa8.35□□□□□ -1.07
CDRT1-207ENST00000583965 GRIFINA4D1Z8 144 aa8.35□□□□□ -1.07
CDRT1-207ENST00000583965 HIGD1CA8MV81 97 aa8.35□□□□□ -1.07
CDRT1-207ENST00000583965 H3BVH4 76 aa8.35□□□□□ -1.07
CDRT1-207ENST00000583965 OR5AL1P0C617 328 aa8.35□□□□□ -1.07
CDRT1-207ENST00000583965 RPS10P46783 165 aaKnown RBP8.35□□□□□ -1.07
CDRT1-207ENST00000583965 EMP1P54849 157 aa8.35□□□□□ -1.07
CDRT1-207ENST00000583965 LGALS9BQ3B8N2 356 aa8.35□□□□□ -1.07
CDRT1-207ENST00000583965 NUP35Q8NFH5 326 aa8.35□□□□□ -1.07
CDRT1-207ENST00000583965 GTSF1Q8WW33 167 aa8.35□□□□□ -1.07
CDRT1-207ENST00000583965 PTH2Q96A98 100 aa8.35□□□□□ -1.07
CDRT1-207ENST00000583965 NDUFAF3Q9BU61 184 aa8.35□□□□□ -1.07
CDRT1-207ENST00000583965 NOP10Q9NPE3 64 aaKnown RBP8.35□□□□□ -1.07
CDRT1-207ENST00000583965 C1orf196B1AJZ1 125 aa8.34□□□□□ -1.07
CDRT1-207ENST00000583965 F2Z2F3 143 aa8.34□□□□□ -1.07
CDRT1-207ENST00000583965 M0R2P5 195 aa8.34□□□□□ -1.07
CDRT1-207ENST00000583965 PHOX2AO14813 284 aa8.34□□□□□ -1.07
CDRT1-207ENST00000583965 DEFB4AO15263 64 aa8.34□□□□□ -1.07
CDRT1-207ENST00000583965 SNAI2O43623 268 aa8.34□□□□□ -1.07
CDRT1-207ENST00000583965 ARMS2P0C7Q2 107 aa8.34□□□□□ -1.07
CDRT1-207ENST00000583965 IGLC6P0CF74 106 aa8.34□□□□□ -1.07
CDRT1-207ENST00000583965 SPART-AS1P0CW21 52 aa8.34□□□□□ -1.07
CDRT1-207ENST00000583965 PIK3CD-AS1Q5SR53 167 aa8.34□□□□□ -1.07
CDRT1-207ENST00000583965 FAM222AQ5U5X8 452 aa8.34□□□□□ -1.07
CDRT1-207ENST00000583965 FER1L6-AS1Q8NA97 138 aa8.34□□□□□ -1.07
CDRT1-207ENST00000583965 SSBP4Q9BWG4 385 aaPredicted RBP8.34□□□□□ -1.07
CDRT1-207ENST00000583965 SCRT2Q9NQ03 307 aa8.34□□□□□ -1.07
CDRT1-207ENST00000583965 DKK2Q9UBU2 259 aa8.34□□□□□ -1.07
CDRT1-207ENST00000583965 A0A1B0GXF2 115 aa8.33□□□□□ -1.08
CDRT1-207ENST00000583965 SPINK4O60575 86 aa8.33□□□□□ -1.08
CDRT1-207ENST00000583965 GZMBP10144 247 aa8.33□□□□□ -1.08
CDRT1-207ENST00000583965 RAB5BP61020 215 aa8.33□□□□□ -1.08
CDRT1-207ENST00000583965 WDR73Q6P4I2 378 aa8.33□□□□□ -1.08
CDRT1-207ENST00000583965 RASL10AQ92737 203 aa8.33□□□□□ -1.08
CDRT1-207ENST00000583965 GNB1LQ9BYB4 327 aa8.33□□□□□ -1.08
CDRT1-207ENST00000583965 TMA7Q9Y2S6 64 aaKnown RBP8.33□□□□□ -1.08
CDRT1-207ENST00000583965 PHLDA3Q9Y5J5 127 aa8.33□□□□□ -1.08
CDRT1-207ENST00000583965 A0A1B0GW15 77 aa8.32□□□□□ -1.08
CDRT1-207ENST00000583965 MT-ND6P03923 174 aa8.32□□□□□ -1.08
CDRT1-207ENST00000583965 CTRLP40313 264 aa8.32□□□□□ -1.08
CDRT1-207ENST00000583965 CACNG7P62955 275 aa8.32□□□□□ -1.08
CDRT1-207ENST00000583965 ZFP82Q8N141 532 aa8.32□□□□□ -1.08
CDRT1-207ENST00000583965 LINC00612Q8N6U2 182 aa8.32□□□□□ -1.08
CDRT1-207ENST00000583965 GATD1Q8NB37 220 aa8.32□□□□□ -1.08
CDRT1-207ENST00000583965 SYT8Q8NBV8 401 aa8.32□□□□□ -1.08
CDRT1-207ENST00000583965 CNFNQ9BYD5 112 aa8.32□□□□□ -1.08
CDRT1-207ENST00000583965 CELA1Q9UNI1 258 aa8.32□□□□□ -1.08
CDRT1-207ENST00000583965 TRGV1A0A0A0MS02 117 aa8.31□□□□□ -1.08
CDRT1-207ENST00000583965 NXPH4O95158 308 aa8.31□□□□□ -1.08
CDRT1-207ENST00000583965 HLA-DQA1P01909 254 aa8.31□□□□□ -1.08
CDRT1-207ENST00000583965 TRGC2P03986 189 aa8.31□□□□□ -1.08
CDRT1-207ENST00000583965 DAD1P61803 113 aa8.31□□□□□ -1.08
CDRT1-207ENST00000583965 ZNF876PQ49A33 203 aa8.31□□□□□ -1.08
CDRT1-207ENST00000583965 LYZL1Q6UWQ5 148 aa8.31□□□□□ -1.08
CDRT1-207ENST00000583965 Q6ZTI0 123 aa8.31□□□□□ -1.08
CDRT1-207ENST00000583965 C11orf45Q8TAV5 145 aa8.31□□□□□ -1.08
CDRT1-207ENST00000583965 C18orf15Q96N68 181 aa8.31□□□□□ -1.08
CDRT1-207ENST00000583965 TPPP3Q9BW30 176 aa8.31□□□□□ -1.08
CDRT1-207ENST00000583965 EDA2RQ9HAV5 297 aa8.31□□□□□ -1.08
CDRT1-207ENST00000583965 IGHV4-4A0A075B6R2 117 aa8.3□□□□□ -1.08
CDRT1-207ENST00000583965 A0A1B0GUT8 65 aa8.3□□□□□ -1.08
CDRT1-207ENST00000583965 GAGE12BA1L429 117 aa8.3□□□□□ -1.08
CDRT1-207ENST00000583965 GAGE7O76087 117 aa8.3□□□□□ -1.08
CDRT1-207ENST00000583965 GAGE12FP0CL80 117 aa8.3□□□□□ -1.08
CDRT1-207ENST00000583965 GAGE12GP0CL81 117 aa8.3□□□□□ -1.08
CDRT1-207ENST00000583965 GAGE12IP0CL82 117 aa8.3□□□□□ -1.08
CDRT1-207ENST00000583965 SPANXN1Q5VSR9 72 aa8.3□□□□□ -1.08
CDRT1-207ENST00000583965 TMEM136Q6ZRR5 245 aa8.3□□□□□ -1.08
CDRT1-207ENST00000583965 OR10AG1Q8NH19 301 aa8.3□□□□□ -1.08
CDRT1-207ENST00000583965 BORCS7Q96B45 105 aa8.3□□□□□ -1.08
CDRT1-207ENST00000583965 PGLYRP4Q96LB8 373 aa8.3□□□□□ -1.08
CDRT1-207ENST00000583965 MRPL16Q9NX20 251 aaKnown RBP8.3□□□□□ -1.08
CDRT1-207ENST00000583965 TRAPPC1Q9Y5R8 145 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms