RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 FOXA3P55318 350 aaPredicted RBP6.81□□□□□ -1.32
RFFL-210ENST00000582308 RHEBQ15382 184 aa6.81□□□□□ -1.32
RFFL-210ENST00000582308 ATRAIDQ6UW56 229 aa6.81□□□□□ -1.32
RFFL-210ENST00000582308 FER1L6-AS1Q8NA97 138 aa6.81□□□□□ -1.32
RFFL-210ENST00000582308 SPXQ9BT56 116 aa6.81□□□□□ -1.32
RFFL-210ENST00000582308 C11orf68Q9H3H3 251 aaKnown RBP6.81□□□□□ -1.32
RFFL-210ENST00000582308 DKK2Q9UBU2 259 aa6.81□□□□□ -1.32
RFFL-210ENST00000582308 CELA1Q9UNI1 258 aa6.81□□□□□ -1.32
RFFL-210ENST00000582308 A0A087WWC5 75 aa6.8□□□□□ -1.32
RFFL-210ENST00000582308 MUC21A0A0G2JKD1 596 aa6.8□□□□□ -1.32
RFFL-210ENST00000582308 MUC21A0A140T8X8 626 aa6.8□□□□□ -1.32
RFFL-210ENST00000582308 A0A1W2PPQ1 181 aa6.8□□□□□ -1.32
RFFL-210ENST00000582308 M0R2P5 195 aa6.8□□□□□ -1.32
RFFL-210ENST00000582308 SPINK4O60575 86 aa6.8□□□□□ -1.32
RFFL-210ENST00000582308 ATP6V1G1O75348 118 aa6.8□□□□□ -1.32
RFFL-210ENST00000582308 SNAPINO95295 136 aa6.8□□□□□ -1.32
RFFL-210ENST00000582308 CTRLP40313 264 aa6.8□□□□□ -1.32
RFFL-210ENST00000582308 FAM222AQ5U5X8 452 aa6.8□□□□□ -1.32
RFFL-210ENST00000582308 DMRTA1Q5VZB9 504 aa6.8□□□□□ -1.32
RFFL-210ENST00000582308 LYZL1Q6UWQ5 148 aa6.8□□□□□ -1.32
RFFL-210ENST00000582308 Q6ZTI0 123 aa6.8□□□□□ -1.32
RFFL-210ENST00000582308 OR10AG1Q8NH19 301 aa6.8□□□□□ -1.32
RFFL-210ENST00000582308 PGLYRP4Q96LB8 373 aa6.8□□□□□ -1.32
RFFL-210ENST00000582308 TPPP3Q9BW30 176 aa6.8□□□□□ -1.32
RFFL-210ENST00000582308 CTDSP1Q9GZU7 261 aa6.8□□□□□ -1.32
RFFL-210ENST00000582308 GFRA4Q9GZZ7 299 aa6.8□□□□□ -1.32
RFFL-210ENST00000582308 RPS10P5Q9NQ39 176 aa6.8□□□□□ -1.32
RFFL-210ENST00000582308 MRPL16Q9NX20 251 aaKnown RBP6.8□□□□□ -1.32
RFFL-210ENST00000582308 U3KQK5 164 aa6.8□□□□□ -1.32
RFFL-210ENST00000582308 TRGV1A0A0A0MS02 117 aa6.79□□□□□ -1.32
RFFL-210ENST00000582308 FAM231BA6NCW3 169 aa6.79□□□□□ -1.32
RFFL-210ENST00000582308 LYRM9A8MSI8 78 aa6.79□□□□□ -1.32
RFFL-210ENST00000582308 HIGD1CA8MV81 97 aa6.79□□□□□ -1.32
RFFL-210ENST00000582308 F2Z2F3 143 aa6.79□□□□□ -1.32
RFFL-210ENST00000582308 NXPH4O95158 308 aa6.79□□□□□ -1.32
RFFL-210ENST00000582308 SSTP61278 116 aa6.79□□□□□ -1.32
RFFL-210ENST00000582308 LGALS9BQ3B8N2 356 aa6.79□□□□□ -1.32
RFFL-210ENST00000582308 LINC00612Q8N6U2 182 aa6.79□□□□□ -1.32
RFFL-210ENST00000582308 NUP35Q8NFH5 326 aa6.79□□□□□ -1.32
RFFL-210ENST00000582308 RASL10AQ92737 203 aa6.79□□□□□ -1.32
RFFL-210ENST00000582308 PTH2Q96A98 100 aa6.79□□□□□ -1.32
RFFL-210ENST00000582308 PHLDA3Q9Y5J5 127 aa6.79□□□□□ -1.32
RFFL-210ENST00000582308 GAGE12BA1L429 117 aa6.78□□□□□ -1.32
RFFL-210ENST00000582308 M0R381 172 aa6.78□□□□□ -1.32
RFFL-210ENST00000582308 GAGE7O76087 117 aa6.78□□□□□ -1.32
RFFL-210ENST00000582308 GAGE12FP0CL80 117 aa6.78□□□□□ -1.32
RFFL-210ENST00000582308 GAGE12GP0CL81 117 aa6.78□□□□□ -1.32
RFFL-210ENST00000582308 GAGE12IP0CL82 117 aa6.78□□□□□ -1.32
RFFL-210ENST00000582308 SPART-AS1P0CW21 52 aa6.78□□□□□ -1.32
RFFL-210ENST00000582308 FAM3BP58499 235 aaPredicted RBP6.78□□□□□ -1.32
RFFL-210ENST00000582308 ZNF876PQ49A33 203 aa6.78□□□□□ -1.32
RFFL-210ENST00000582308 WDR73Q6P4I2 378 aa6.78□□□□□ -1.32
RFFL-210ENST00000582308 CNFNQ9BYD5 112 aa6.78□□□□□ -1.32
RFFL-210ENST00000582308 TMEM242Q9NWH2 141 aa6.78□□□□□ -1.32
RFFL-210ENST00000582308 MSRB1Q9NZV6 116 aa6.78□□□□□ -1.32
RFFL-210ENST00000582308 IGHV4-4A0A075B6R2 117 aa6.77□□□□□ -1.33
RFFL-210ENST00000582308 CXorf65A6NEN9 183 aa6.77□□□□□ -1.33
RFFL-210ENST00000582308 DEFB130BP0DP73 79 aa6.77□□□□□ -1.33
RFFL-210ENST00000582308 DEFB130AP0DP74 79 aa6.77□□□□□ -1.33
RFFL-210ENST00000582308 NTF3P20783 257 aa6.77□□□□□ -1.33
RFFL-210ENST00000582308 CACNG7P62955 275 aa6.77□□□□□ -1.33
RFFL-210ENST00000582308 C12orf74Q32Q52 190 aa6.77□□□□□ -1.33
RFFL-210ENST00000582308 PIK3CD-AS1Q5SR53 167 aa6.77□□□□□ -1.33
RFFL-210ENST00000582308 SPANXN1Q5VSR9 72 aa6.77□□□□□ -1.33
RFFL-210ENST00000582308 ZFP82Q8N141 532 aa6.77□□□□□ -1.33
RFFL-210ENST00000582308 POM121L12Q8N7R1 296 aa6.77□□□□□ -1.33
RFFL-210ENST00000582308 IMMP2LQ96T52 175 aa6.77□□□□□ -1.33
RFFL-210ENST00000582308 JPT2Q9H910 190 aa6.77□□□□□ -1.33
RFFL-210ENST00000582308 EDA2RQ9HAV5 297 aa6.77□□□□□ -1.33
RFFL-210ENST00000582308 NAT8BQ9UHF3 227 aa6.77□□□□□ -1.33
RFFL-210ENST00000582308 A0A1B0GUT8 65 aa6.76□□□□□ -1.33
RFFL-210ENST00000582308 S100A1P23297 94 aa6.76□□□□□ -1.33
RFFL-210ENST00000582308 NANOS2P60321 138 aaKnown RBP6.76□□□□□ -1.33
RFFL-210ENST00000582308 DAD1P61803 113 aa6.76□□□□□ -1.33
RFFL-210ENST00000582308 SYT8Q8NBV8 401 aa6.76□□□□□ -1.33
RFFL-210ENST00000582308 C11orf45Q8TAV5 145 aa6.76□□□□□ -1.33
RFFL-210ENST00000582308 SAMD10Q9BYL1 202 aa6.76□□□□□ -1.33
RFFL-210ENST00000582308 DNAH7Q8WXX0 4024 aa6.75□□□□□ -1.33
RFFL-210ENST00000582308 TRGV2A0A075B6R0 118 aa6.75□□□□□ -1.33
RFFL-210ENST00000582308 TEX48A0A1B0GUV7 120 aa6.75□□□□□ -1.33
RFFL-210ENST00000582308 RS1O15537 224 aa6.75□□□□□ -1.33
RFFL-210ENST00000582308 RIGQ13278 110 aa6.75□□□□□ -1.33
RFFL-210ENST00000582308 TWIST1Q15672 202 aa6.75□□□□□ -1.33
RFFL-210ENST00000582308 CFAP126Q5VTH2 177 aa6.75□□□□□ -1.33
RFFL-210ENST00000582308 C18orf15Q96N68 181 aa6.75□□□□□ -1.33
RFFL-210ENST00000582308 NDUFAF3Q9BU61 184 aa6.75□□□□□ -1.33
RFFL-210ENST00000582308 URGCP-MRPS24S4R325 110 aa6.75□□□□□ -1.33
RFFL-210ENST00000582308 TRAV4A0A0B4J268 109 aa6.74□□□□□ -1.33
RFFL-210ENST00000582308 A0A1B0GXF2 115 aa6.74□□□□□ -1.33
RFFL-210ENST00000582308 A8MWV9 139 aa6.74□□□□□ -1.33
RFFL-210ENST00000582308 IGHV3-53P01767 116 aa6.74□□□□□ -1.33
RFFL-210ENST00000582308 CRYGDP07320 174 aa6.74□□□□□ -1.33
RFFL-210ENST00000582308 UFSP1Q6NVU6 142 aa6.74□□□□□ -1.33
RFFL-210ENST00000582308 MRPL54Q6P161 138 aaKnown RBP6.74□□□□□ -1.33
RFFL-210ENST00000582308 TMEM88Q6PEY1 159 aa6.74□□□□□ -1.33
RFFL-210ENST00000582308 Q6ZTC4 211 aa6.74□□□□□ -1.33
RFFL-210ENST00000582308 C14orf178Q8N769 122 aaPredicted RBP6.74□□□□□ -1.33
RFFL-210ENST00000582308 BORCS7Q96B45 105 aa6.74□□□□□ -1.33
RFFL-210ENST00000582308 ZNF479Q96JC4 524 aa6.74□□□□□ -1.33
RFFL-210ENST00000582308 YPEL4Q96NS1 127 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms