RNA–Protein interactions for RNA: ENST00000581394.1

TTC39C-207, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3

Gene TTC39C, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-207ENST00000581394 MAGOHBQ96A72 148 aaKnown RBP0.36□□□□□ -2.35
TTC39C-207ENST00000581394 FAM103A1Q9BTL3 118 aaKnown RBP0.36□□□□□ -2.35
TTC39C-207ENST00000581394 TAS2R8Q9NYW2 309 aa0.36□□□□□ -2.35
TTC39C-207ENST00000581394 CASZ1Q86V15 1759 aa0.36□□□□□ -2.35
TTC39C-207ENST00000581394 HELZP42694 1942 aaKnown RBP0.36□□□□□ -2.35
TTC39C-207ENST00000581394 ADGRB1O14514 1584 aa0.36□□□□□ -2.35
TTC39C-207ENST00000581394 CDK12Q9NYV4 1490 aaPredicted RBP0.35□□□□□ -2.35
TTC39C-207ENST00000581394 MYH1P12882 1939 aa0.35□□□□□ -2.35
TTC39C-207ENST00000581394 TRAV17A0A0B4J275 112 aa0.35□□□□□ -2.35
TTC39C-207ENST00000581394 SPINT3P49223 89 aa0.35□□□□□ -2.35
TTC39C-207ENST00000581394 POLR2JP52435 117 aaKnown RBP0.35□□□□□ -2.35
TTC39C-207ENST00000581394 MIC13Q5XKP0 118 aa0.35□□□□□ -2.35
TTC39C-207ENST00000581394 DYNLRB2Q8TF09 96 aa0.35□□□□□ -2.35
TTC39C-207ENST00000581394 PPDPFLQ8WWR9 84 aa0.35□□□□□ -2.35
TTC39C-207ENST00000581394 NOP16Q9Y3C1 178 aaKnown RBP0.35□□□□□ -2.35
TTC39C-207ENST00000581394 DISP2A7MBM2 1401 aa0.35□□□□□ -2.35
TTC39C-207ENST00000581394 BLMP54132 1417 aaPredicted RBP0.35□□□□□ -2.35
TTC39C-207ENST00000581394 TRPM7Q96QT4 1865 aa0.35□□□□□ -2.35
TTC39C-207ENST00000581394 CCDC171Q6TFL3 1326 aa0.35□□□□□ -2.35
TTC39C-207ENST00000581394 SPAG17Q6Q759 2223 aa0.34□□□□□ -2.35
TTC39C-207ENST00000581394 ASH1LQ9NR48 2969 aaKnown RBP0.34□□□□□ -2.35
TTC39C-207ENST00000581394 A0A087WTM6 91 aa0.34□□□□□ -2.36
TTC39C-207ENST00000581394 TRAV2A0A0B4J234 112 aa0.34□□□□□ -2.36
TTC39C-207ENST00000581394 PRH1P02810 166 aa0.34□□□□□ -2.36
TTC39C-207ENST00000581394 ZNF137PP52743 207 aa0.34□□□□□ -2.36
TTC39C-207ENST00000581394 NPC2P61916 151 aa0.34□□□□□ -2.36
TTC39C-207ENST00000581394 KLKP1Q107X0 134 aa0.34□□□□□ -2.36
TTC39C-207ENST00000581394 C6orf52Q5T4I8 152 aa0.34□□□□□ -2.36
TTC39C-207ENST00000581394 LINC01545Q5VT33 79 aa0.34□□□□□ -2.36
TTC39C-207ENST00000581394 IFI27L1Q96BM0 104 aa0.34□□□□□ -2.36
TTC39C-207ENST00000581394 SDF2Q99470 211 aa0.34□□□□□ -2.36
TTC39C-207ENST00000581394 NINQ8N4C6 2090 aa0.34□□□□□ -2.36
TTC39C-207ENST00000581394 NPFFO15130 113 aa0.33□□□□□ -2.36
TTC39C-207ENST00000581394 NDUFA2O43678 99 aa0.33□□□□□ -2.36
TTC39C-207ENST00000581394 NCR2O95944 276 aa0.33□□□□□ -2.36
TTC39C-207ENST00000581394 RBP4P02753 201 aa0.33□□□□□ -2.36
TTC39C-207ENST00000581394 ELOF1P60002 83 aaKnown RBP0.33□□□□□ -2.36
TTC39C-207ENST00000581394 EMX2Q04743 252 aa0.33□□□□□ -2.36
TTC39C-207ENST00000581394 UNQ5815/PRO19632Q6UWF5 114 aa0.33□□□□□ -2.36
TTC39C-207ENST00000581394 CTAGE3PQ8IX95 158 aa0.33□□□□□ -2.36
TTC39C-207ENST00000581394 NDUFA12Q9UI09 145 aa0.33□□□□□ -2.36
TTC39C-207ENST00000581394 BICRAQ9NZM4 1560 aa0.32□□□□□ -2.36
TTC39C-207ENST00000581394 MEGF8Q7Z7M0 2845 aa0.32□□□□□ -2.36
TTC39C-207ENST00000581394 ZNF670-ZNF695F2Z2N8 137 aa0.32□□□□□ -2.36
TTC39C-207ENST00000581394 J3QLW9 94 aa0.32□□□□□ -2.36
TTC39C-207ENST00000581394 M0R2Z0 102 aa0.32□□□□□ -2.36
TTC39C-207ENST00000581394 YPEL1O60688 119 aa0.32□□□□□ -2.36
TTC39C-207ENST00000581394 NCS1P62166 190 aa0.32□□□□□ -2.36
TTC39C-207ENST00000581394 RPS25P62851 125 aaKnown RBP0.32□□□□□ -2.36
TTC39C-207ENST00000581394 SMCO1Q147U7 214 aa0.32□□□□□ -2.36
TTC39C-207ENST00000581394 KRTAP21-1Q3LI58 79 aa0.32□□□□□ -2.36
TTC39C-207ENST00000581394 MMGT1Q8N4V1 131 aa0.32□□□□□ -2.36
TTC39C-207ENST00000581394 TSKUQ8WUA8 353 aa0.32□□□□□ -2.36
TTC39C-207ENST00000581394 TMEM14BQ9NUH8 114 aa0.32□□□□□ -2.36
TTC39C-207ENST00000581394 COPZ2Q9P299 210 aa0.32□□□□□ -2.36
TTC39C-207ENST00000581394 ERG28Q9UKR5 140 aa0.32□□□□□ -2.36
TTC39C-207ENST00000581394 ABCA1O95477 2261 aa0.32□□□□□ -2.36
TTC39C-207ENST00000581394 NAV3Q8IVL0 2385 aa0.32□□□□□ -2.36
TTC39C-207ENST00000581394 DLEC1Q9Y238 1755 aa0.32□□□□□ -2.36
TTC39C-207ENST00000581394 ESPL1Q14674 2120 aa0.31□□□□□ -2.36
TTC39C-207ENST00000581394 TEX49A0A1B0GTD5 131 aa0.31□□□□□ -2.36
TTC39C-207ENST00000581394 FXYD1O00168 92 aa0.31□□□□□ -2.36
TTC39C-207ENST00000581394 PYYP10082 97 aa0.31□□□□□ -2.36
TTC39C-207ENST00000581394 SPINK13Q1W4C9 94 aa0.31□□□□□ -2.36
TTC39C-207ENST00000581394 SPATA8Q6RVD6 105 aa0.31□□□□□ -2.36
TTC39C-207ENST00000581394 Q6ZUT4 128 aa0.31□□□□□ -2.36
TTC39C-207ENST00000581394 TSTD1Q8NFU3 115 aa0.31□□□□□ -2.36
TTC39C-207ENST00000581394 LZICQ8WZA0 190 aa0.31□□□□□ -2.36
TTC39C-207ENST00000581394 TPT1P8Q9HAU6 139 aa0.31□□□□□ -2.36
TTC39C-207ENST00000581394 RREB1Q92766 1687 aa0.3□□□□□ -2.36
TTC39C-207ENST00000581394 SOGA1O94964 1423 aa0.3□□□□□ -2.36
TTC39C-207ENST00000581394 CLPSL1A2RUU4 121 aa0.3□□□□□ -2.36
TTC39C-207ENST00000581394 PHGR1C9JFL3 82 aa0.3□□□□□ -2.36
TTC39C-207ENST00000581394 S100A12P80511 92 aa0.3□□□□□ -2.36
TTC39C-207ENST00000581394 NDUFA11Q86Y39 141 aa0.3□□□□□ -2.36
TTC39C-207ENST00000581394 VSTM2AQ8TAG5 236 aa0.3□□□□□ -2.36
TTC39C-207ENST00000581394 SMR3AQ99954 134 aa0.3□□□□□ -2.36
TTC39C-207ENST00000581394 SAR1AQ9NR31 198 aa0.3□□□□□ -2.36
TTC39C-207ENST00000581394 JMJD1CQ15652 2540 aa0.29□□□□□ -2.36
TTC39C-207ENST00000581394 PLXNA2O75051 1894 aa0.29□□□□□ -2.36
TTC39C-207ENST00000581394 PIRTP0C851 137 aa0.29□□□□□ -2.36
TTC39C-207ENST00000581394 COX4I1P13073 169 aa0.29□□□□□ -2.36
TTC39C-207ENST00000581394 CCL3L1P16619 93 aa0.29□□□□□ -2.36
TTC39C-207ENST00000581394 ARPC4P59998 168 aa0.29□□□□□ -2.36
TTC39C-207ENST00000581394 BDP1A6H8Y1 2624 aa0.29□□□□□ -2.36
TTC39C-207ENST00000581394 CDK5RAP2Q96SN8 1893 aa0.29□□□□□ -2.36
TTC39C-207ENST00000581394 SYNE1Q8NF91 8797 aaKnown RBP0.28□□□□□ -2.36
TTC39C-207ENST00000581394 MED13LQ71F56 2210 aa0.28□□□□□ -2.36
TTC39C-207ENST00000581394 TRAV12-3A0A0B4J271 114 aa0.28□□□□□ -2.36
TTC39C-207ENST00000581394 CCDC179H3BU77 68 aa0.28□□□□□ -2.36
TTC39C-207ENST00000581394 K7ERU9 68 aa0.28□□□□□ -2.36
TTC39C-207ENST00000581394 SPINK7P58062 85 aa0.28□□□□□ -2.36
TTC39C-207ENST00000581394 SPCS2Q15005 226 aa0.28□□□□□ -2.36
TTC39C-207ENST00000581394 DPH3Q96FX2 82 aa0.28□□□□□ -2.36
TTC39C-207ENST00000581394 Q96NJ1 140 aa0.28□□□□□ -2.36
TTC39C-207ENST00000581394 KIAA0100Q14667 2235 aaKnown RBP0.28□□□□□ -2.37
TTC39C-207ENST00000581394 APCP25054 2843 aa0.27□□□□□ -2.37
TTC39C-207ENST00000581394 J3QR89 54 aa0.27□□□□□ -2.37
TTC39C-207ENST00000581394 COPZ1P61923 177 aa0.27□□□□□ -2.37
TTC39C-207ENST00000581394 C9orf116Q5BN46 136 aaPredicted RBP0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms