RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 SPART-AS1P0CW21 52 aa7.44□□□□□ -1.22
CCDC47-203ENST00000580986 RNASE3P12724 160 aaKnown RBP7.44□□□□□ -1.22
CCDC47-203ENST00000580986 HTN1P15515 57 aa7.44□□□□□ -1.22
CCDC47-203ENST00000580986 ERVFC1-1P60608 527 aa7.44□□□□□ -1.22
CCDC47-203ENST00000580986 C15orf54Q8N8G6 183 aa7.44□□□□□ -1.22
CCDC47-203ENST00000580986 SFRP2Q96HF1 295 aa7.44□□□□□ -1.22
CCDC47-203ENST00000580986 RPP21Q9H633 154 aaKnown RBP7.44□□□□□ -1.22
CCDC47-203ENST00000580986 SCRT2Q9NQ03 307 aa7.44□□□□□ -1.22
CCDC47-203ENST00000580986 GSN-AS1Q9NRJ2 163 aa7.44□□□□□ -1.22
CCDC47-203ENST00000580986 A0A1W2PPQ1 181 aa7.43□□□□□ -1.22
CCDC47-203ENST00000580986 A8MWL6 223 aa7.43□□□□□ -1.22
CCDC47-203ENST00000580986 M0R036 132 aa7.43□□□□□ -1.22
CCDC47-203ENST00000580986 PPP1R2P9O14990 202 aa7.43□□□□□ -1.22
CCDC47-203ENST00000580986 GNRH2O43555 120 aa7.43□□□□□ -1.22
CCDC47-203ENST00000580986 SNAI2O43623 268 aa7.43□□□□□ -1.22
CCDC47-203ENST00000580986 SPINK4O60575 86 aa7.43□□□□□ -1.22
CCDC47-203ENST00000580986 GHRHP01286 108 aa7.43□□□□□ -1.22
CCDC47-203ENST00000580986 FOXA3P55318 350 aaPredicted RBP7.43□□□□□ -1.22
CCDC47-203ENST00000580986 ADIRFQ15847 76 aa7.43□□□□□ -1.22
CCDC47-203ENST00000580986 OR2D3Q8NGH3 330 aa7.43□□□□□ -1.22
CCDC47-203ENST00000580986 RASL10AQ92737 203 aa7.43□□□□□ -1.22
CCDC47-203ENST00000580986 CNFNQ9BYD5 112 aa7.43□□□□□ -1.22
CCDC47-203ENST00000580986 GFRA4Q9GZZ7 299 aa7.43□□□□□ -1.22
CCDC47-203ENST00000580986 RNASE7Q9H1E1 156 aaKnown RBP7.43□□□□□ -1.22
CCDC47-203ENST00000580986 MDFICQ9P1T7 246 aa7.43□□□□□ -1.22
CCDC47-203ENST00000580986 F2Z2F3 143 aa7.42□□□□□ -1.22
CCDC47-203ENST00000580986 M0R2P5 195 aa7.42□□□□□ -1.22
CCDC47-203ENST00000580986 GATCO43716 136 aaKnown RBP7.42□□□□□ -1.22
CCDC47-203ENST00000580986 NXPH4O95158 308 aa7.42□□□□□ -1.22
CCDC47-203ENST00000580986 PRM2P04554 102 aa7.42□□□□□ -1.22
CCDC47-203ENST00000580986 IGLC6P0CF74 106 aa7.42□□□□□ -1.22
CCDC47-203ENST00000580986 S100A4P26447 101 aaKnown RBP7.42□□□□□ -1.22
CCDC47-203ENST00000580986 FAM222AQ5U5X8 452 aa7.42□□□□□ -1.22
CCDC47-203ENST00000580986 ANAPC16Q96DE5 110 aa7.42□□□□□ -1.22
CCDC47-203ENST00000580986 V9GYV3 84 aa7.42□□□□□ -1.22
CCDC47-203ENST00000580986 CXorf65A6NEN9 183 aa7.41□□□□□ -1.22
CCDC47-203ENST00000580986 CIDEAO60543 219 aa7.41□□□□□ -1.22
CCDC47-203ENST00000580986 ARMS2P0C7Q2 107 aa7.41□□□□□ -1.22
CCDC47-203ENST00000580986 CTRLP40313 264 aa7.41□□□□□ -1.22
CCDC47-203ENST00000580986 RPL19P84098 196 aaKnown RBP7.41□□□□□ -1.22
CCDC47-203ENST00000580986 WDR73Q6P4I2 378 aa7.41□□□□□ -1.22
CCDC47-203ENST00000580986 OR10G8Q8NGN5 311 aa7.41□□□□□ -1.22
CCDC47-203ENST00000580986 TSKUQ8WUA8 353 aa7.41□□□□□ -1.22
CCDC47-203ENST00000580986 NOP10Q9NPE3 64 aaKnown RBP7.41□□□□□ -1.22
CCDC47-203ENST00000580986 IGHV4-4A0A075B6R2 117 aa7.4□□□□□ -1.22
CCDC47-203ENST00000580986 H3BVH4 76 aa7.4□□□□□ -1.22
CCDC47-203ENST00000580986 DEFB4AO15263 64 aa7.4□□□□□ -1.22
CCDC47-203ENST00000580986 MT-ND4LP03901 98 aa7.4□□□□□ -1.22
CCDC47-203ENST00000580986 ZFP82Q8N141 532 aa7.4□□□□□ -1.22
CCDC47-203ENST00000580986 FER1L6-AS1Q8NA97 138 aa7.4□□□□□ -1.22
CCDC47-203ENST00000580986 SYT8Q8NBV8 401 aa7.4□□□□□ -1.22
CCDC47-203ENST00000580986 C11orf45Q8TAV5 145 aa7.4□□□□□ -1.22
CCDC47-203ENST00000580986 TMEM242Q9NWH2 141 aa7.4□□□□□ -1.22
CCDC47-203ENST00000580986 CELA1Q9UNI1 258 aa7.4□□□□□ -1.22
CCDC47-203ENST00000580986 A0A087WWC5 75 aa7.39□□□□□ -1.23
CCDC47-203ENST00000580986 TMSB15BA0A087X1C1 80 aa7.39□□□□□ -1.23
CCDC47-203ENST00000580986 EMP1P54849 157 aa7.39□□□□□ -1.23
CCDC47-203ENST00000580986 DAD1P61803 113 aa7.39□□□□□ -1.23
CCDC47-203ENST00000580986 CACNG7P62955 275 aa7.39□□□□□ -1.23
CCDC47-203ENST00000580986 RHEBQ15382 184 aa7.39□□□□□ -1.23
CCDC47-203ENST00000580986 ZNF876PQ49A33 203 aa7.39□□□□□ -1.23
CCDC47-203ENST00000580986 SVBPQ8N300 66 aa7.39□□□□□ -1.23
CCDC47-203ENST00000580986 WWC2-AS2Q96NR7 200 aa7.39□□□□□ -1.23
CCDC47-203ENST00000580986 CTDSP1Q9GZU7 261 aa7.39□□□□□ -1.23
CCDC47-203ENST00000580986 PHLDA3Q9Y5J5 127 aa7.39□□□□□ -1.23
CCDC47-203ENST00000580986 TGP01266 2768 aa7.39□□□□□ -1.23
CCDC47-203ENST00000580986 MUC4Q99102 2169 aa7.38□□□□□ -1.23
CCDC47-203ENST00000580986 TRGV1A0A0A0MS02 117 aa7.38□□□□□ -1.23
CCDC47-203ENST00000580986 SMIM27A0A1W2PRY6 76 aa7.38□□□□□ -1.23
CCDC47-203ENST00000580986 GRIFINA4D1Z8 144 aa7.38□□□□□ -1.23
CCDC47-203ENST00000580986 A8MWV9 139 aa7.38□□□□□ -1.23
CCDC47-203ENST00000580986 C12orf74Q32Q52 190 aa7.38□□□□□ -1.23
CCDC47-203ENST00000580986 RNF212Q495C1 297 aa7.38□□□□□ -1.23
CCDC47-203ENST00000580986 Q6ZTI0 123 aa7.38□□□□□ -1.23
CCDC47-203ENST00000580986 SLC7A5P1Q8MH63 180 aa7.38□□□□□ -1.23
CCDC47-203ENST00000580986 GTSF1Q8WW33 167 aa7.38□□□□□ -1.23
CCDC47-203ENST00000580986 IMMP2LQ96T52 175 aa7.38□□□□□ -1.23
CCDC47-203ENST00000580986 TRAV4A0A0B4J268 109 aa7.37□□□□□ -1.23
CCDC47-203ENST00000580986 HIGD1CA8MV81 97 aa7.37□□□□□ -1.23
CCDC47-203ENST00000580986 SNAPINO95295 136 aa7.37□□□□□ -1.23
CCDC47-203ENST00000580986 ATP5G1P05496 136 aa7.37□□□□□ -1.23
CCDC47-203ENST00000580986 GZMBP10144 247 aa7.37□□□□□ -1.23
CCDC47-203ENST00000580986 ZFP2Q6ZN57 461 aa7.37□□□□□ -1.23
CCDC47-203ENST00000580986 CLRN3Q8NCR9 226 aa7.37□□□□□ -1.23
CCDC47-203ENST00000580986 NAT8BQ9UHF3 227 aa7.37□□□□□ -1.23
CCDC47-203ENST00000580986 TRGV2A0A075B6R0 118 aa7.36□□□□□ -1.23
CCDC47-203ENST00000580986 GAGE12BA1L429 117 aa7.36□□□□□ -1.23
CCDC47-203ENST00000580986 RHODO00212 210 aa7.36□□□□□ -1.23
CCDC47-203ENST00000580986 GAGE7O76087 117 aa7.36□□□□□ -1.23
CCDC47-203ENST00000580986 GAGE12FP0CL80 117 aa7.36□□□□□ -1.23
CCDC47-203ENST00000580986 GAGE12GP0CL81 117 aa7.36□□□□□ -1.23
CCDC47-203ENST00000580986 GAGE12IP0CL82 117 aa7.36□□□□□ -1.23
CCDC47-203ENST00000580986 SLAQ13239 276 aa7.36□□□□□ -1.23
CCDC47-203ENST00000580986 SPANXN1Q5VSR9 72 aa7.36□□□□□ -1.23
CCDC47-203ENST00000580986 LYZL1Q6UWQ5 148 aa7.36□□□□□ -1.23
CCDC47-203ENST00000580986 Q6ZTC4 211 aa7.36□□□□□ -1.23
CCDC47-203ENST00000580986 OR10AG1Q8NH19 301 aa7.36□□□□□ -1.23
CCDC47-203ENST00000580986 FAM210BQ96KR6 192 aa7.36□□□□□ -1.23
CCDC47-203ENST00000580986 MRPL16Q9NX20 251 aaKnown RBP7.36□□□□□ -1.23
CCDC47-203ENST00000580986 TRAV9-1A0A075B6T8 112 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms