RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 AMMECR1LQ6DCA0 310 aa9.6□□□□□ -0.87
CDK5RAP3-217ENST00000580287 U3KQE9 123 aa9.6□□□□□ -0.87
CDK5RAP3-217ENST00000580287 LEPROTL1O95214 131 aa9.59□□□□□ -0.87
CDK5RAP3-217ENST00000580287 LYZL1Q6UWQ5 148 aa9.59□□□□□ -0.87
CDK5RAP3-217ENST00000580287 CHCHD1Q96BP2 118 aaKnown RBP9.59□□□□□ -0.87
CDK5RAP3-217ENST00000580287 SLC50A1Q9BRV3 221 aa9.59□□□□□ -0.87
CDK5RAP3-217ENST00000580287 RHPN1-AS1Q9BWJ2 59 aa9.59□□□□□ -0.87
CDK5RAP3-217ENST00000580287 SCRT2Q9NQ03 307 aa9.59□□□□□ -0.87
CDK5RAP3-217ENST00000580287 FBN1P35555 2871 aaKnown RBP9.59□□□□□ -0.87
CDK5RAP3-217ENST00000580287 LOC389332A0A1B0GUA5 103 aa9.59□□□□□ -0.87
CDK5RAP3-217ENST00000580287 KRTAP10-3P60369 221 aa9.59□□□□□ -0.87
CDK5RAP3-217ENST00000580287 C16orf92Q96LL3 132 aa9.59□□□□□ -0.87
CDK5RAP3-217ENST00000580287 JMJD8Q96S16 334 aa9.59□□□□□ -0.87
CDK5RAP3-217ENST00000580287 C16orf95Q9H693 158 aa9.59□□□□□ -0.87
CDK5RAP3-217ENST00000580287 A0A087X0K7 114 aa9.58□□□□□ -0.88
CDK5RAP3-217ENST00000580287 GPHB5Q86YW7 130 aa9.58□□□□□ -0.88
CDK5RAP3-217ENST00000580287 TMEM191AQ9H0A3 160 aa9.58□□□□□ -0.88
CDK5RAP3-217ENST00000580287 DAZ1Q9NQZ3 744 aaKnown RBP9.58□□□□□ -0.88
CDK5RAP3-217ENST00000580287 C12orf54Q6X4T0 127 aa9.58□□□□□ -0.88
CDK5RAP3-217ENST00000580287 SMIM15Q7Z3B0 74 aa9.58□□□□□ -0.88
CDK5RAP3-217ENST00000580287 SORL1Q92673 2214 aa9.58□□□□□ -0.88
CDK5RAP3-217ENST00000580287 PROK1P58294 105 aa9.57□□□□□ -0.88
CDK5RAP3-217ENST00000580287 DEFB1P60022 68 aa9.57□□□□□ -0.88
CDK5RAP3-217ENST00000580287 IGHV7-4-1A0A0J9YVY3 117 aa9.57□□□□□ -0.88
CDK5RAP3-217ENST00000580287 SMKR1H3BMG3 65 aa9.57□□□□□ -0.88
CDK5RAP3-217ENST00000580287 TIRAPP58753 221 aa9.57□□□□□ -0.88
CDK5RAP3-217ENST00000580287 LINC01559Q495D7 138 aa9.57□□□□□ -0.88
CDK5RAP3-217ENST00000580287 Q6AWC8 147 aa9.57□□□□□ -0.88
CDK5RAP3-217ENST00000580287 OR1N2Q8NGR9 330 aa9.57□□□□□ -0.88
CDK5RAP3-217ENST00000580287 DLX4Q92988 240 aaPredicted RBP9.57□□□□□ -0.88
CDK5RAP3-217ENST00000580287 GEMIN7Q9H840 131 aaKnown RBP9.57□□□□□ -0.88
CDK5RAP3-217ENST00000580287 SMPXQ9UHP9 88 aa9.57□□□□□ -0.88
CDK5RAP3-217ENST00000580287 FBLL1A6NHQ2 334 aaKnown RBP9.56□□□□□ -0.88
CDK5RAP3-217ENST00000580287 TMEM78Q5T7P6 136 aa9.56□□□□□ -0.88
CDK5RAP3-217ENST00000580287 Q6ZQT7 251 aa9.56□□□□□ -0.88
CDK5RAP3-217ENST00000580287 WFDC3Q8IUB2 231 aa9.56□□□□□ -0.88
CDK5RAP3-217ENST00000580287 AMN1Q8IY45 258 aa9.56□□□□□ -0.88
CDK5RAP3-217ENST00000580287 C4orf3Q8WVX3 66 aa9.56□□□□□ -0.88
CDK5RAP3-217ENST00000580287 RAX2Q96IS3 184 aa9.56□□□□□ -0.88
CDK5RAP3-217ENST00000580287 ZMAT4Q9H898 229 aa9.56□□□□□ -0.88
CDK5RAP3-217ENST00000580287 TRAV8-2A0A0B4J237 113 aa9.56□□□□□ -0.88
CDK5RAP3-217ENST00000580287 TRAV8-6A0A0B4J262 113 aa9.56□□□□□ -0.88
CDK5RAP3-217ENST00000580287 NSUN5P1Q3KNT7 163 aa9.56□□□□□ -0.88
CDK5RAP3-217ENST00000580287 ADAMTSL5Q6ZMM2 481 aa9.56□□□□□ -0.88
CDK5RAP3-217ENST00000580287 MSRB1Q9NZV6 116 aa9.56□□□□□ -0.88
CDK5RAP3-217ENST00000580287 FABP5P3A8MUU1 101 aa9.55□□□□□ -0.88
CDK5RAP3-217ENST00000580287 LINC01619G3V211 115 aa9.55□□□□□ -0.88
CDK5RAP3-217ENST00000580287 GAS8-AS1O95177 125 aa9.55□□□□□ -0.88
CDK5RAP3-217ENST00000580287 ID1P41134 155 aa9.55□□□□□ -0.88
CDK5RAP3-217ENST00000580287 HIST1H1AQ02539 215 aaPredicted RBP9.55□□□□□ -0.88
CDK5RAP3-217ENST00000580287 TWIST1Q15672 202 aa9.55□□□□□ -0.88
CDK5RAP3-217ENST00000580287 FER1L6-AS1Q8NA97 138 aa9.55□□□□□ -0.88
CDK5RAP3-217ENST00000580287 MAP1LC3CQ9BXW4 147 aa9.55□□□□□ -0.88
CDK5RAP3-217ENST00000580287 AGPAT4-IT1Q9H0P7 198 aa9.55□□□□□ -0.88
CDK5RAP3-217ENST00000580287 NCR2O95944 276 aa9.55□□□□□ -0.88
CDK5RAP3-217ENST00000580287 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.55□□□□□ -0.88
CDK5RAP3-217ENST00000580287 NOTCH3Q9UM47 2321 aa9.55□□□□□ -0.88
CDK5RAP3-217ENST00000580287 TRRAPQ9Y4A5 3859 aa9.55□□□□□ -0.88
CDK5RAP3-217ENST00000580287 A0A1B0GW15 77 aa9.54□□□□□ -0.88
CDK5RAP3-217ENST00000580287 TMEM238C9JI98 176 aa9.54□□□□□ -0.88
CDK5RAP3-217ENST00000580287 D6R8Y8 96 aa9.54□□□□□ -0.88
CDK5RAP3-217ENST00000580287 SNAI2O43623 268 aa9.54□□□□□ -0.88
CDK5RAP3-217ENST00000580287 NDUFA7O95182 113 aa9.54□□□□□ -0.88
CDK5RAP3-217ENST00000580287 IFI27P40305 119 aaPredicted RBP9.54□□□□□ -0.88
CDK5RAP3-217ENST00000580287 GAGE12BA1L429 117 aa9.54□□□□□ -0.88
CDK5RAP3-217ENST00000580287 OR5AL1P0C617 328 aa9.54□□□□□ -0.88
CDK5RAP3-217ENST00000580287 MS4A6AQ9H2W1 248 aa9.54□□□□□ -0.88
CDK5RAP3-217ENST00000580287 UFC1Q9Y3C8 167 aa9.54□□□□□ -0.88
CDK5RAP3-217ENST00000580287 C2orf91Q6ZV80 131 aa9.53□□□□□ -0.88
CDK5RAP3-217ENST00000580287 C20orf173Q96LM9 149 aa9.53□□□□□ -0.88
CDK5RAP3-217ENST00000580287 CCL24O00175 119 aa9.53□□□□□ -0.88
CDK5RAP3-217ENST00000580287 ZNF575Q86XF7 245 aa9.53□□□□□ -0.88
CDK5RAP3-217ENST00000580287 CSTL1Q9H114 145 aa9.53□□□□□ -0.88
CDK5RAP3-217ENST00000580287 TSSC4Q9Y5U2 329 aaPredicted RBP9.53□□□□□ -0.88
CDK5RAP3-217ENST00000580287 RBAKDNA6NC62 111 aa9.52□□□□□ -0.88
CDK5RAP3-217ENST00000580287 K7EMT4 169 aa9.52□□□□□ -0.88
CDK5RAP3-217ENST00000580287 LINC01545Q5VT33 79 aa9.52□□□□□ -0.88
CDK5RAP3-217ENST00000580287 COX8CQ7Z4L0 72 aa9.52□□□□□ -0.88
CDK5RAP3-217ENST00000580287 PRSS3P2Q8NHM4 247 aa9.52□□□□□ -0.88
CDK5RAP3-217ENST00000580287 HSPB8Q9UJY1 196 aa9.52□□□□□ -0.88
CDK5RAP3-217ENST00000580287 ADARB2-AS1A8MUL3 147 aa9.52□□□□□ -0.89
CDK5RAP3-217ENST00000580287 C7orf71A4D174 169 aa9.52□□□□□ -0.89
CDK5RAP3-217ENST00000580287 K7ERU9 68 aa9.52□□□□□ -0.89
CDK5RAP3-217ENST00000580287 SPRY2O43597 315 aa9.52□□□□□ -0.89
CDK5RAP3-217ENST00000580287 COX8AP10176 69 aa9.52□□□□□ -0.89
CDK5RAP3-217ENST00000580287 AP5S1Q9NUS5 200 aa9.52□□□□□ -0.89
CDK5RAP3-217ENST00000580287 F6UB75 175 aa9.51□□□□□ -0.89
CDK5RAP3-217ENST00000580287 BOD1L2Q8IYS8 172 aa9.51□□□□□ -0.89
CDK5RAP3-217ENST00000580287 OR9G4Q8NGQ1 327 aa9.51□□□□□ -0.89
CDK5RAP3-217ENST00000580287 LGALS9O00182 355 aa9.51□□□□□ -0.89
CDK5RAP3-217ENST00000580287 FAM104BQ5XKR9 115 aa9.51□□□□□ -0.89
CDK5RAP3-217ENST00000580287 FA2HQ7L5A8 372 aa9.51□□□□□ -0.89
CDK5RAP3-217ENST00000580287 OR8A1Q8NGG7 326 aa9.51□□□□□ -0.89
CDK5RAP3-217ENST00000580287 A0A096LNJ9 63 aa9.5□□□□□ -0.89
CDK5RAP3-217ENST00000580287 TRAV25A0A0B4J276 109 aa9.5□□□□□ -0.89
CDK5RAP3-217ENST00000580287 PRELID3AQ96N28 172 aa9.5□□□□□ -0.89
CDK5RAP3-217ENST00000580287 STAB1Q9NY15 2570 aa9.5□□□□□ -0.89
CDK5RAP3-217ENST00000580287 SOCS3O14543 225 aa9.5□□□□□ -0.89
CDK5RAP3-217ENST00000580287 IGLC6P0CF74 106 aa9.5□□□□□ -0.89
CDK5RAP3-217ENST00000580287 GATA1P15976 413 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 258.3 ms