RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 GNG13Q9P2W3 67 aa11.12□□□□□ -0.63
VAPA-204ENST00000577901 C11orf21Q9P2W6 132 aa11.12□□□□□ -0.63
VAPA-204ENST00000577901 LTAP01374 205 aa11.11□□□□□ -0.63
VAPA-204ENST00000577901 HHLA3Q9XRX5 114 aa11.11□□□□□ -0.63
VAPA-204ENST00000577901 TRGV4A0A0C4DH28 118 aa11.1□□□□□ -0.63
VAPA-204ENST00000577901 SCO2A0A1W2PP80 73 aa11.1□□□□□ -0.63
VAPA-204ENST00000577901 ORM1P02763 201 aa11.1□□□□□ -0.63
VAPA-204ENST00000577901 FAM162BQ5T6X4 162 aa11.1□□□□□ -0.63
VAPA-204ENST00000577901 ZC2HC1AQ96GY0 325 aa11.1□□□□□ -0.63
VAPA-204ENST00000577901 TXNDC17Q9BRA2 123 aa11.1□□□□□ -0.63
VAPA-204ENST00000577901 PRO0255Q9UI72 69 aa11.1□□□□□ -0.63
VAPA-204ENST00000577901 LINC00588Q9Y4M8 146 aa11.1□□□□□ -0.63
VAPA-204ENST00000577901 IGKV3D-20A0A0C4DH25 116 aa11.09□□□□□ -0.63
VAPA-204ENST00000577901 PAX4O43316 350 aa11.09□□□□□ -0.63
VAPA-204ENST00000577901 IFNA1P01562 189 aa11.09□□□□□ -0.63
VAPA-204ENST00000577901 S100A4P26447 101 aaKnown RBP11.09□□□□□ -0.63
VAPA-204ENST00000577901 CRIP1P50238 77 aa11.09□□□□□ -0.63
VAPA-204ENST00000577901 FHL2Q14192 279 aa11.09□□□□□ -0.63
VAPA-204ENST00000577901 ZNF876PQ49A33 203 aa11.09□□□□□ -0.63
VAPA-204ENST00000577901 OR4C5Q8NGB2 326 aa11.09□□□□□ -0.63
VAPA-204ENST00000577901 VSIG2Q96IQ7 327 aa11.09□□□□□ -0.63
VAPA-204ENST00000577901 TRAV4A0A0B4J268 109 aa11.08□□□□□ -0.64
VAPA-204ENST00000577901 B4DEV8 164 aa11.08□□□□□ -0.64
VAPA-204ENST00000577901 C9JCJ5 164 aa11.08□□□□□ -0.64
VAPA-204ENST00000577901 CRYBA4P53673 196 aa11.08□□□□□ -0.64
VAPA-204ENST00000577901 BAGE2Q86Y30 109 aa11.08□□□□□ -0.64
VAPA-204ENST00000577901 ZNF479Q96JC4 524 aa11.08□□□□□ -0.64
VAPA-204ENST00000577901 C9orf85Q96MD7 179 aa11.08□□□□□ -0.64
VAPA-204ENST00000577901 SH2D1AO60880 128 aa11.07□□□□□ -0.64
VAPA-204ENST00000577901 SFTA3P0C7M3 94 aa11.07□□□□□ -0.64
VAPA-204ENST00000577901 ASIPP42127 132 aa11.07□□□□□ -0.64
VAPA-204ENST00000577901 ZNF674Q2M3X9 581 aa11.07□□□□□ -0.64
VAPA-204ENST00000577901 PTH2Q96A98 100 aa11.07□□□□□ -0.64
VAPA-204ENST00000577901 A0A096LPF7 62 aa11.06□□□□□ -0.64
VAPA-204ENST00000577901 KRBOX1C9JBD0 128 aa11.06□□□□□ -0.64
VAPA-204ENST00000577901 CIDEAO60543 219 aa11.06□□□□□ -0.64
VAPA-204ENST00000577901 RNASE3P12724 160 aaKnown RBP11.06□□□□□ -0.64
VAPA-204ENST00000577901 TAGLN2P37802 199 aaKnown RBP11.06□□□□□ -0.64
VAPA-204ENST00000577901 NHLRC2Q8NBF2 726 aa11.06□□□□□ -0.64
VAPA-204ENST00000577901 ICOSQ9Y6W8 199 aa11.06□□□□□ -0.64
VAPA-204ENST00000577901 M0R036 132 aa11.05□□□□□ -0.64
VAPA-204ENST00000577901 PDE6DO43924 150 aa11.05□□□□□ -0.64
VAPA-204ENST00000577901 RPL35P42766 123 aaKnown RBP11.05□□□□□ -0.64
VAPA-204ENST00000577901 NKX2-5P52952 324 aaPredicted RBP11.05□□□□□ -0.64
VAPA-204ENST00000577901 BLOC1S1P78537 153 aa11.05□□□□□ -0.64
VAPA-204ENST00000577901 MEF2BQ02080 365 aaPredicted RBP11.05□□□□□ -0.64
VAPA-204ENST00000577901 ALKAL2Q6UX46 152 aa11.05□□□□□ -0.64
VAPA-204ENST00000577901 SPATA12Q7Z6I5 190 aa11.05□□□□□ -0.64
VAPA-204ENST00000577901 Q8N1X5 172 aa11.05□□□□□ -0.64
VAPA-204ENST00000577901 C11orf52Q96A22 123 aa11.05□□□□□ -0.64
VAPA-204ENST00000577901 Q9H8V8 135 aa11.05□□□□□ -0.64
VAPA-204ENST00000577901 IL36BQ9NZH7 164 aa11.05□□□□□ -0.64
VAPA-204ENST00000577901 VAX2Q9UIW0 290 aa11.05□□□□□ -0.64
VAPA-204ENST00000577901 PGPEP1LA6NFU8 196 aa11.04□□□□□ -0.64
VAPA-204ENST00000577901 MRPL23Q16540 153 aaKnown RBP11.04□□□□□ -0.64
VAPA-204ENST00000577901 ESRGQ1W209 222 aa11.04□□□□□ -0.64
VAPA-204ENST00000577901 LINC01559Q495D7 138 aa11.04□□□□□ -0.64
VAPA-204ENST00000577901 DNLZQ5SXM8 178 aa11.04□□□□□ -0.64
VAPA-204ENST00000577901 PCNPQ8WW12 178 aaKnown RBP11.04□□□□□ -0.64
VAPA-204ENST00000577901 MLST8Q9BVC4 326 aa11.04□□□□□ -0.64
VAPA-204ENST00000577901 HERC1Q15751 4861 aa11.04□□□□□ -0.64
VAPA-204ENST00000577901 RS1O15537 224 aa11.03□□□□□ -0.64
VAPA-204ENST00000577901 BCL2P10415 239 aa11.03□□□□□ -0.64
VAPA-204ENST00000577901 SMCPP49901 116 aaPredicted RBP11.03□□□□□ -0.64
VAPA-204ENST00000577901 ZNF506Q5JVG8 444 aa11.03□□□□□ -0.64
VAPA-204ENST00000577901 PIK3CD-AS1Q5SR53 167 aa11.03□□□□□ -0.64
VAPA-204ENST00000577901 SCRT2Q9NQ03 307 aa11.03□□□□□ -0.64
VAPA-204ENST00000577901 TMSB15BA0A087X1C1 80 aa11.02□□□□□ -0.65
VAPA-204ENST00000577901 GRIFINA4D1Z8 144 aa11.02□□□□□ -0.65
VAPA-204ENST00000577901 ARMS2P0C7Q2 107 aa11.02□□□□□ -0.65
VAPA-204ENST00000577901 TTC32Q5I0X7 151 aa11.02□□□□□ -0.65
VAPA-204ENST00000577901 CFAP126Q5VTH2 177 aa11.02□□□□□ -0.65
VAPA-204ENST00000577901 SYT8Q8NBV8 401 aa11.02□□□□□ -0.65
VAPA-204ENST00000577901 KRTAP1-5Q9BYS1 174 aa11.02□□□□□ -0.65
VAPA-204ENST00000577901 MED9Q9NWA0 146 aa11.02□□□□□ -0.65
VAPA-204ENST00000577901 A8MWV9 139 aa11.01□□□□□ -0.65
VAPA-204ENST00000577901 H3BVH4 76 aa11.01□□□□□ -0.65
VAPA-204ENST00000577901 GYPEP15421 78 aa11.01□□□□□ -0.65
VAPA-204ENST00000577901 SRIP30626 198 aa11.01□□□□□ -0.65
VAPA-204ENST00000577901 PRR27Q6MZM9 219 aa11.01□□□□□ -0.65
VAPA-204ENST00000577901 NEGR1Q7Z3B1 354 aa11.01□□□□□ -0.65
VAPA-204ENST00000577901 UPK3BQ9BT76 320 aa11.01□□□□□ -0.65
VAPA-204ENST00000577901 DERL1Q9BUN8 251 aa11.01□□□□□ -0.65
VAPA-204ENST00000577901 MRPS16Q9Y3D3 137 aaKnown RBP11.01□□□□□ -0.65
VAPA-204ENST00000577901 PHLDA3Q9Y5J5 127 aa11.01□□□□□ -0.65
VAPA-204ENST00000577901 K7EQD1 137 aa11□□□□□ -0.65
VAPA-204ENST00000577901 GATA1P15976 413 aaPredicted RBP11□□□□□ -0.65
VAPA-204ENST00000577901 CENPWQ5EE01 88 aa11□□□□□ -0.65
VAPA-204ENST00000577901 LCE2CQ5TA81 110 aa11□□□□□ -0.65
VAPA-204ENST00000577901 SMIM12Q96EX1 92 aa11□□□□□ -0.65
VAPA-204ENST00000577901 RAB19A4D1S5 217 aa10.99□□□□□ -0.65
VAPA-204ENST00000577901 GNG4P50150 75 aa10.99□□□□□ -0.65
VAPA-204ENST00000577901 KRTAP10-2P60368 255 aa10.99□□□□□ -0.65
VAPA-204ENST00000577901 SH2D6Q7Z4S9 175 aa10.99□□□□□ -0.65
VAPA-204ENST00000577901 DAZAP1Q96EP5 407 aaKnown RBP10.99□□□□□ -0.65
VAPA-204ENST00000577901 PRADC1Q9BSG0 188 aa10.99□□□□□ -0.65
VAPA-204ENST00000577901 IGHV3-73A0A0B4J1V6 119 aa10.98□□□□□ -0.65
VAPA-204ENST00000577901 TRBV6-4A0A1B0GX49 114 aa10.98□□□□□ -0.65
VAPA-204ENST00000577901 MGST1P10620 155 aaKnown RBP10.98□□□□□ -0.65
VAPA-204ENST00000577901 LYPD5Q6UWN5 251 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms