RNA–Protein interactions for RNA: ENST00000575909.1

TOM1L1-222, Transcript of target of myb1 like 1 membrane trafficking protein, human

TSL 3

Gene TOM1L1, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1L1-222	ENST00000575909	DEFB121	Q5J5C9	76 aa		3.8	□□□□□ -1.8
TOM1L1-222	ENST00000575909	FAM104B	Q5XKR9	115 aa		3.8	□□□□□ -1.8
TOM1L1-222	ENST00000575909		Q6ZQT7	251 aa		3.8	□□□□□ -1.8
TOM1L1-222	ENST00000575909	C2orf91	Q6ZV80	131 aa		3.8	□□□□□ -1.8
TOM1L1-222	ENST00000575909	FAM216B	Q8N7L0	139 aa		3.8	□□□□□ -1.8
TOM1L1-222	ENST00000575909	C3orf56	Q8N813	242 aa		3.8	□□□□□ -1.8
TOM1L1-222	ENST00000575909		Q8N8P6	123 aa		3.8	□□□□□ -1.8
TOM1L1-222	ENST00000575909	CXCL16	Q9H2A7	254 aa		3.8	□□□□□ -1.8
TOM1L1-222	ENST00000575909	OSTC	Q9NRP0	149 aa		3.8	□□□□□ -1.8
TOM1L1-222	ENST00000575909	TP73-AS1	Q9UF72	201 aa		3.8	□□□□□ -1.8
TOM1L1-222	ENST00000575909	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	3.8	□□□□□ -1.8
TOM1L1-222	ENST00000575909	CPS1	P31327	1500 aa		3.8	□□□□□ -1.8
TOM1L1-222	ENST00000575909	PTPRM	P28827	1452 aa		3.79	□□□□□ -1.8
TOM1L1-222	ENST00000575909	BTAF1	O14981	1849 aa		3.79	□□□□□ -1.8
TOM1L1-222	ENST00000575909	AFDN	P55196	1824 aa	Known RBP	3.79	□□□□□ -1.8
TOM1L1-222	ENST00000575909	NACA	E9PAV3	2078 aa		3.79	□□□□□ -1.8
TOM1L1-222	ENST00000575909	IGKV6D-21	A0A0A0MT36	114 aa		3.79	□□□□□ -1.8
TOM1L1-222	ENST00000575909	TRAV3	A0A0B4J244	114 aa		3.79	□□□□□ -1.8
TOM1L1-222	ENST00000575909	TCRBV4S1A1T	A0A5B7	111 aa		3.79	□□□□□ -1.8
TOM1L1-222	ENST00000575909		E7EQL1	145 aa		3.79	□□□□□ -1.8
TOM1L1-222	ENST00000575909	NUPR1	O60356	82 aa		3.79	□□□□□ -1.8
TOM1L1-222	ENST00000575909	RPL18	Q07020	188 aa	Known RBP	3.79	□□□□□ -1.8
TOM1L1-222	ENST00000575909		Q1T7F1	81 aa		3.79	□□□□□ -1.8
TOM1L1-222	ENST00000575909	SLC48A1	Q6P1K1	146 aa		3.79	□□□□□ -1.8
TOM1L1-222	ENST00000575909	CIRBP-AS1	Q8TBR5	109 aa		3.79	□□□□□ -1.8
TOM1L1-222	ENST00000575909	MRPL35	Q9NZE8	188 aa	Known RBP	3.79	□□□□□ -1.8
TOM1L1-222	ENST00000575909	ZNF706	Q9Y5V0	76 aa	Predicted RBP	3.79	□□□□□ -1.8
TOM1L1-222	ENST00000575909	CIC	Q96RK0	1608 aa	Predicted RBP	3.79	□□□□□ -1.8
TOM1L1-222	ENST00000575909	ANKRD36C	Q5JPF3	1778 aa		3.79	□□□□□ -1.8
TOM1L1-222	ENST00000575909	ARFGEF2	Q9Y6D5	1785 aa		3.79	□□□□□ -1.8
TOM1L1-222	ENST00000575909	MYOM1	P52179	1685 aa		3.78	□□□□□ -1.8
TOM1L1-222	ENST00000575909	RALGAPA2	Q2PPJ7	1873 aa		3.78	□□□□□ -1.8
TOM1L1-222	ENST00000575909	IGHV3OR15-7	A0A075B7D8	119 aa		3.78	□□□□□ -1.8
TOM1L1-222	ENST00000575909	IGKV1-9	A0A0C4DH69	117 aa		3.78	□□□□□ -1.8
TOM1L1-222	ENST00000575909		J3QLW9	94 aa		3.78	□□□□□ -1.8
TOM1L1-222	ENST00000575909		K7ERJ3	54 aa		3.78	□□□□□ -1.8
TOM1L1-222	ENST00000575909	PRH1	P02810	166 aa		3.78	□□□□□ -1.8
TOM1L1-222	ENST00000575909	CD28	P10747	220 aa		3.78	□□□□□ -1.8
TOM1L1-222	ENST00000575909	RNASE4	P34096	147 aa	Known RBP	3.78	□□□□□ -1.8
TOM1L1-222	ENST00000575909	WFDC5	Q8TCV5	224 aa		3.78	□□□□□ -1.8
TOM1L1-222	ENST00000575909	DYNLRB2	Q8TF09	96 aa		3.78	□□□□□ -1.8
TOM1L1-222	ENST00000575909	TOPAZ1	Q8N9V7	1692 aa		3.78	□□□□□ -1.81
TOM1L1-222	ENST00000575909	CASP8AP2	Q9UKL3	1982 aa		3.77	□□□□□ -1.81
TOM1L1-222	ENST00000575909	IGKV2-28	A0A075B6P5	120 aa		3.77	□□□□□ -1.81
TOM1L1-222	ENST00000575909	NPY	P01303	97 aa		3.77	□□□□□ -1.81
TOM1L1-222	ENST00000575909	IGKV2D-28	P01615	120 aa		3.77	□□□□□ -1.81
TOM1L1-222	ENST00000575909	IGKV3-11	P04433	115 aa		3.77	□□□□□ -1.81
TOM1L1-222	ENST00000575909	IL4	P05112	153 aa		3.77	□□□□□ -1.81
TOM1L1-222	ENST00000575909	RNASE2	P10153	161 aa	Known RBP	3.77	□□□□□ -1.81
TOM1L1-222	ENST00000575909	EIF4EBP1	Q13541	118 aa	Predicted RBP	3.77	□□□□□ -1.81
TOM1L1-222	ENST00000575909	CHCHD1	Q96BP2	118 aa	Known RBP	3.77	□□□□□ -1.81
TOM1L1-222	ENST00000575909	RNF5	Q99942	180 aa		3.77	□□□□□ -1.81
TOM1L1-222	ENST00000575909	CRYBG1	Q9Y4K1	1723 aa		3.77	□□□□□ -1.81
TOM1L1-222	ENST00000575909	ALS2	Q96Q42	1657 aa		3.77	□□□□□ -1.81
TOM1L1-222	ENST00000575909	PRRC2A	P48634	2157 aa	Known RBP	3.76	□□□□□ -1.81
TOM1L1-222	ENST00000575909	NEXMIF	Q5QGS0	1516 aa		3.76	□□□□□ -1.81
TOM1L1-222	ENST00000575909	NUP188	Q5SRE5	1749 aa		3.76	□□□□□ -1.81
TOM1L1-222	ENST00000575909		E9PCH4	1651 aa		3.76	□□□□□ -1.81
TOM1L1-222	ENST00000575909	IGLV3-25	P01717	112 aa		3.76	□□□□□ -1.81
TOM1L1-222	ENST00000575909	ZNF32	P17041	273 aa		3.76	□□□□□ -1.81
TOM1L1-222	ENST00000575909	SNRPG	P62308	76 aa	Known RBP	3.76	□□□□□ -1.81
TOM1L1-222	ENST00000575909	ZNF56	Q15929	161 aa		3.76	□□□□□ -1.81
TOM1L1-222	ENST00000575909	MIR17HG	Q75NE6	70 aa		3.76	□□□□□ -1.81
TOM1L1-222	ENST00000575909	MARCH3	Q86UD3	253 aa		3.76	□□□□□ -1.81
TOM1L1-222	ENST00000575909	PDPN	Q86YL7	162 aa		3.76	□□□□□ -1.81
TOM1L1-222	ENST00000575909	IFI27L1	Q96BM0	104 aa		3.76	□□□□□ -1.81
TOM1L1-222	ENST00000575909	FAM103A1	Q9BTL3	118 aa	Known RBP	3.76	□□□□□ -1.81
TOM1L1-222	ENST00000575909	CHCHD7	Q9BUK0	85 aa		3.76	□□□□□ -1.81
TOM1L1-222	ENST00000575909	CMC2	Q9NRP2	79 aa		3.76	□□□□□ -1.81
TOM1L1-222	ENST00000575909	SLIT2	O94813	1529 aa		3.75	□□□□□ -1.81
TOM1L1-222	ENST00000575909	PLCH1	Q4KWH8	1693 aa		3.75	□□□□□ -1.81
TOM1L1-222	ENST00000575909	EML6	Q6ZMW3	1958 aa		3.75	□□□□□ -1.81
TOM1L1-222	ENST00000575909	KIF21B	O75037	1637 aa		3.75	□□□□□ -1.81
TOM1L1-222	ENST00000575909	TRAV13-2	A0A0B4J235	113 aa		3.75	□□□□□ -1.81
TOM1L1-222	ENST00000575909		A0A1B0GWA3	101 aa		3.75	□□□□□ -1.81
TOM1L1-222	ENST00000575909	CRYM-AS1	A6NIL9	109 aa		3.75	□□□□□ -1.81
TOM1L1-222	ENST00000575909	C2orf70	A6NJV1	201 aa		3.75	□□□□□ -1.81
TOM1L1-222	ENST00000575909	KRTAP9-6	A8MVA2	160 aa		3.75	□□□□□ -1.81
TOM1L1-222	ENST00000575909	INAFM2	P0DMQ5	153 aa		3.75	□□□□□ -1.81
TOM1L1-222	ENST00000575909	GCHFR	P30047	84 aa		3.75	□□□□□ -1.81
TOM1L1-222	ENST00000575909	RPL27A	P46776	148 aa	Known RBP	3.75	□□□□□ -1.81
TOM1L1-222	ENST00000575909	RBM3	P98179	157 aa	Known RBP	3.75	□□□□□ -1.81
TOM1L1-222	ENST00000575909	INSL4	Q14641	139 aa		3.75	□□□□□ -1.81
TOM1L1-222	ENST00000575909	MRPL51	Q4U2R6	128 aa	Known RBP	3.75	□□□□□ -1.81
TOM1L1-222	ENST00000575909	SPANXN1	Q5VSR9	72 aa		3.75	□□□□□ -1.81
TOM1L1-222	ENST00000575909	CLDND2	Q8NHS1	167 aa		3.75	□□□□□ -1.81
TOM1L1-222	ENST00000575909	ITLN2	Q8WWU7	325 aa	Predicted RBP	3.75	□□□□□ -1.81
TOM1L1-222	ENST00000575909		Q96M85	177 aa		3.75	□□□□□ -1.81
TOM1L1-222	ENST00000575909	TXNDC17	Q9BRA2	123 aa		3.75	□□□□□ -1.81
TOM1L1-222	ENST00000575909	SLC50A1	Q9BRV3	221 aa		3.75	□□□□□ -1.81
TOM1L1-222	ENST00000575909	TULP4	Q9NRJ4	1543 aa		3.75	□□□□□ -1.81
TOM1L1-222	ENST00000575909	MCM3AP	O60318	1980 aa		3.74	□□□□□ -1.81
TOM1L1-222	ENST00000575909	MED12L	Q86YW9	2145 aa		3.74	□□□□□ -1.81
TOM1L1-222	ENST00000575909	IGHV3-49	A0A0A0MS15	119 aa		3.74	□□□□□ -1.81
TOM1L1-222	ENST00000575909	TRAV1-2	A0A0B4J238	106 aa		3.74	□□□□□ -1.81
TOM1L1-222	ENST00000575909		A0A0B4J2C4	111 aa		3.74	□□□□□ -1.81
TOM1L1-222	ENST00000575909	MYMX	A0A1B0GTQ4	84 aa		3.74	□□□□□ -1.81
TOM1L1-222	ENST00000575909		A0A1W2PQD3	144 aa		3.74	□□□□□ -1.81
TOM1L1-222	ENST00000575909	CPSF4	O95639	269 aa	Known RBP	3.74	□□□□□ -1.81
TOM1L1-222	ENST00000575909	IGLV2-8	P01709	118 aa		3.74	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms