RNA–Protein interactions for RNA: ENST00000574049.1

RPA1-207, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 3,849 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-207ENST00000574049 DYNAPQ8N1N2 210 aa5.91□□□□□ -1.46
RPA1-207ENST00000574049 ZNF48Q96MX3 618 aaPredicted RBP5.91□□□□□ -1.46
RPA1-207ENST00000574049 TEX15Q9BXT5 2789 aa5.9□□□□□ -1.46
RPA1-207ENST00000574049 SVEP1Q4LDE5 3571 aa5.9□□□□□ -1.46
RPA1-207ENST00000574049 TMEM89A2RUT3 159 aa5.9□□□□□ -1.46
RPA1-207ENST00000574049 H3BRM9 83 aa5.9□□□□□ -1.46
RPA1-207ENST00000574049 TNFRSF13BO14836 293 aaPredicted RBP5.9□□□□□ -1.46
RPA1-207ENST00000574049 SMIM20Q8N5G0 67 aa5.9□□□□□ -1.46
RPA1-207ENST00000574049 TRBV20-1A0A075B6N2 111 aa5.9□□□□□ -1.46
RPA1-207ENST00000574049 LINC01548A6NM66 108 aa5.9□□□□□ -1.46
RPA1-207ENST00000574049 M0R1W7 72 aa5.9□□□□□ -1.46
RPA1-207ENST00000574049 HBDP02042 147 aa5.9□□□□□ -1.46
RPA1-207ENST00000574049 PRR20EP86478 221 aa5.9□□□□□ -1.46
RPA1-207ENST00000574049 PRR20CP86479 221 aa5.9□□□□□ -1.46
RPA1-207ENST00000574049 PRR20DP86480 221 aa5.9□□□□□ -1.46
RPA1-207ENST00000574049 PRR20BP86481 221 aa5.9□□□□□ -1.46
RPA1-207ENST00000574049 PRR20AP86496 221 aa5.9□□□□□ -1.46
RPA1-207ENST00000574049 GAGE2BQ13066 116 aa5.9□□□□□ -1.46
RPA1-207ENST00000574049 RRN3P1Q2M238 152 aa5.9□□□□□ -1.46
RPA1-207ENST00000574049 GAGE2EQ4V326 116 aa5.9□□□□□ -1.46
RPA1-207ENST00000574049 ZNF625Q96I27 306 aaPredicted RBP5.9□□□□□ -1.46
RPA1-207ENST00000574049 TOMM7Q9P0U1 55 aa5.9□□□□□ -1.46
RPA1-207ENST00000574049 GAGE2DQ9UEU5 116 aa5.9□□□□□ -1.46
RPA1-207ENST00000574049 H3BS24 57 aa5.9□□□□□ -1.47
RPA1-207ENST00000574049 CR1LQ2VPA4 569 aa5.9□□□□□ -1.47
RPA1-207ENST00000574049 ZFAND6Q6FIF0 208 aa5.9□□□□□ -1.47
RPA1-207ENST00000574049 KIR2DL4Q99706 377 aa5.9□□□□□ -1.47
RPA1-207ENST00000574049 COX8AP10176 69 aa5.89□□□□□ -1.47
RPA1-207ENST00000574049 HOXB4P17483 251 aaPredicted RBP5.89□□□□□ -1.47
RPA1-207ENST00000574049 C3orf56Q8N813 242 aa5.89□□□□□ -1.47
RPA1-207ENST00000574049 OR9G4Q8NGQ1 327 aa5.89□□□□□ -1.47
RPA1-207ENST00000574049 KLK9Q9UKQ9 250 aa5.89□□□□□ -1.47
RPA1-207ENST00000574049 MOB4Q9Y3A3 225 aa5.89□□□□□ -1.47
RPA1-207ENST00000574049 CENPVL3A0A0U1RRI6 287 aa5.89□□□□□ -1.47
RPA1-207ENST00000574049 IGLV1-47P01700 117 aa5.89□□□□□ -1.47
RPA1-207ENST00000574049 SPINK13Q1W4C9 94 aa5.89□□□□□ -1.47
RPA1-207ENST00000574049 RNASE13Q5GAN3 156 aaKnown RBP5.89□□□□□ -1.47
RPA1-207ENST00000574049 Q86TA4 180 aa5.89□□□□□ -1.47
RPA1-207ENST00000574049 TMEM158Q8WZ71 300 aa5.89□□□□□ -1.47
RPA1-207ENST00000574049 FXYD5Q96DB9 178 aa5.89□□□□□ -1.47
RPA1-207ENST00000574049 IGHV3-16A0A0C4DH30 117 aa5.89□□□□□ -1.47
RPA1-207ENST00000574049 TMEM262E9PQX1 116 aa5.89□□□□□ -1.47
RPA1-207ENST00000574049 G3V4G9 280 aa5.89□□□□□ -1.47
RPA1-207ENST00000574049 CHAC1Q9BUX1 264 aa5.89□□□□□ -1.47
RPA1-207ENST00000574049 DKK2Q9UBU2 259 aa5.89□□□□□ -1.47
RPA1-207ENST00000574049 MUC4Q99102 2169 aa5.89□□□□□ -1.47
RPA1-207ENST00000574049 IGKV1-17P01599 117 aa5.88□□□□□ -1.47
RPA1-207ENST00000574049 IGHV4-59P01825 116 aa5.88□□□□□ -1.47
RPA1-207ENST00000574049 CRYGCP07315 174 aa5.88□□□□□ -1.47
RPA1-207ENST00000574049 SLC25A16P16260 332 aa5.88□□□□□ -1.47
RPA1-207ENST00000574049 RPL35AP18077 110 aaKnown RBP5.88□□□□□ -1.47
RPA1-207ENST00000574049 LINC00322Q6ZN03 302 aaPredicted RBP5.88□□□□□ -1.47
RPA1-207ENST00000574049 STHQ8IWL8 128 aa5.88□□□□□ -1.47
RPA1-207ENST00000574049 ZNF491Q8N8L2 437 aa5.88□□□□□ -1.47
RPA1-207ENST00000574049 LINC01356Q8N9X3 169 aa5.88□□□□□ -1.47
RPA1-207ENST00000574049 MRAP2Q96G30 205 aa5.88□□□□□ -1.47
RPA1-207ENST00000574049 SHANK2-AS3Q9BTD1 123 aa5.88□□□□□ -1.47
RPA1-207ENST00000574049 NBEAL1Q6ZS30 2694 aa5.88□□□□□ -1.47
RPA1-207ENST00000574049 TRAV25A0A0B4J276 109 aa5.88□□□□□ -1.47
RPA1-207ENST00000574049 UBE2E1P51965 193 aa5.88□□□□□ -1.47
RPA1-207ENST00000574049 SPATA12Q7Z6I5 190 aa5.88□□□□□ -1.47
RPA1-207ENST00000574049 PHLDA1Q8WV24 401 aaPredicted RBP5.88□□□□□ -1.47
RPA1-207ENST00000574049 TRBV19A0A075B6N1 114 aa5.88□□□□□ -1.47
RPA1-207ENST00000574049 ADARB2-AS1A8MUL3 147 aa5.88□□□□□ -1.47
RPA1-207ENST00000574049 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.88□□□□□ -1.47
RPA1-207ENST00000574049 HOXA3O43365 443 aaPredicted RBP5.88□□□□□ -1.47
RPA1-207ENST00000574049 AVPP01185 164 aa5.88□□□□□ -1.47
RPA1-207ENST00000574049 CTRLP40313 264 aa5.88□□□□□ -1.47
RPA1-207ENST00000574049 RPS20P60866 119 aaKnown RBP5.88□□□□□ -1.47
RPA1-207ENST00000574049 SUMO2P61956 95 aaKnown RBP5.88□□□□□ -1.47
RPA1-207ENST00000574049 CFHR3Q02985 330 aa5.88□□□□□ -1.47
RPA1-207ENST00000574049 PRSS22Q9GZN4 317 aa5.88□□□□□ -1.47
RPA1-207ENST00000574049 APCP25054 2843 aa5.88□□□□□ -1.47
RPA1-207ENST00000574049 TRGV2A0A075B6R0 118 aa5.87□□□□□ -1.47
RPA1-207ENST00000574049 IGHV1-69DA0A0B4J2H0 117 aa5.87□□□□□ -1.47
RPA1-207ENST00000574049 IGHV1-69P01742 117 aa5.87□□□□□ -1.47
RPA1-207ENST00000574049 DSCR9P59020 149 aa5.87□□□□□ -1.47
RPA1-207ENST00000574049 WIPF2Q8TF74 440 aaPredicted RBP5.87□□□□□ -1.47
RPA1-207ENST00000574049 TRAV2A0A0B4J234 112 aa5.87□□□□□ -1.47
RPA1-207ENST00000574049 NPYP01303 97 aa5.87□□□□□ -1.47
RPA1-207ENST00000574049 HERVK_113P61574 105 aa5.87□□□□□ -1.47
RPA1-207ENST00000574049 LY6G5BQ8NDX9 201 aa5.87□□□□□ -1.47
RPA1-207ENST00000574049 KLHL30-AS1Q8NEE0 82 aa5.87□□□□□ -1.47
RPA1-207ENST00000574049 XCL2Q9UBD3 114 aa5.87□□□□□ -1.47
RPA1-207ENST00000574049 TSPAN13O95857 204 aa5.87□□□□□ -1.47
RPA1-207ENST00000574049 LINC00310P59036 64 aa5.87□□□□□ -1.47
RPA1-207ENST00000574049 DEFB131AP59861 70 aa5.87□□□□□ -1.47
RPA1-207ENST00000574049 LOXL1Q08397 574 aaPredicted RBP5.87□□□□□ -1.47
RPA1-207ENST00000574049 LINC00311Q8N616 119 aa5.87□□□□□ -1.47
RPA1-207ENST00000574049 TNFRSF18Q9Y5U5 241 aa5.87□□□□□ -1.47
RPA1-207ENST00000574049 IGKCP01834 107 aa5.86□□□□□ -1.47
RPA1-207ENST00000574049 FOXE3Q13461 319 aa5.86□□□□□ -1.47
RPA1-207ENST00000574049 ATP5L2Q7Z4Y8 100 aa5.86□□□□□ -1.47
RPA1-207ENST00000574049 LY96Q9Y6Y9 160 aa5.86□□□□□ -1.47
RPA1-207ENST00000574049 PRSS46E5RG02 174 aa5.86□□□□□ -1.47
RPA1-207ENST00000574049 DPM2O94777 84 aa5.86□□□□□ -1.47
RPA1-207ENST00000574049 C11orf68Q9H3H3 251 aaKnown RBP5.86□□□□□ -1.47
RPA1-207ENST00000574049 C11orf1Q9H5F2 150 aa5.86□□□□□ -1.47
RPA1-207ENST00000574049 SMIM27A0A1W2PRY6 76 aa5.86□□□□□ -1.47
RPA1-207ENST00000574049 ZNF815PA8K554 130 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms