RNA–Protein interactions for RNA: ENST00000573360.5

TVP23A-207, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 3,677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-207ENST00000573360 CFHR3Q02985 330 aa10.56□□□□□ -0.72
TVP23A-207ENST00000573360 FOXE3Q13461 319 aa10.56□□□□□ -0.72
TVP23A-207ENST00000573360 ANKRD39Q53RE8 183 aa10.56□□□□□ -0.72
TVP23A-207ENST00000573360 PRR25Q96S07 402 aa10.56□□□□□ -0.72
TVP23A-207ENST00000573360 BMI1P35226 326 aa10.56□□□□□ -0.72
TVP23A-207ENST00000573360 Q6AWC8 147 aa10.56□□□□□ -0.72
TVP23A-207ENST00000573360 DLX4Q92988 240 aaPredicted RBP10.56□□□□□ -0.72
TVP23A-207ENST00000573360 SCRT2Q9NQ03 307 aa10.56□□□□□ -0.72
TVP23A-207ENST00000573360 SMPXQ9UHP9 88 aa10.56□□□□□ -0.72
TVP23A-207ENST00000573360 KIR3DS1Q14943 382 aa10.55□□□□□ -0.72
TVP23A-207ENST00000573360 H3BUA1 57 aa10.55□□□□□ -0.72
TVP23A-207ENST00000573360 C20orf173Q96LM9 149 aa10.55□□□□□ -0.72
TVP23A-207ENST00000573360 C7orf71A4D174 169 aa10.55□□□□□ -0.72
TVP23A-207ENST00000573360 TAX1BP3O14907 124 aa10.55□□□□□ -0.72
TVP23A-207ENST00000573360 ZNF80P51504 273 aaPredicted RBP10.55□□□□□ -0.72
TVP23A-207ENST00000573360 IFI27L1Q96BM0 104 aa10.55□□□□□ -0.72
TVP23A-207ENST00000573360 MS4A6AQ9H2W1 248 aa10.55□□□□□ -0.72
TVP23A-207ENST00000573360 A0A1B0GW15 77 aa10.54□□□□□ -0.72
TVP23A-207ENST00000573360 HBDP02042 147 aa10.54□□□□□ -0.72
TVP23A-207ENST00000573360 CRIP2P52943 208 aaPredicted RBP10.54□□□□□ -0.72
TVP23A-207ENST00000573360 UBE2E2Q96LR5 201 aa10.54□□□□□ -0.72
TVP23A-207ENST00000573360 CRXO43186 299 aaPredicted RBP10.54□□□□□ -0.72
TVP23A-207ENST00000573360 TMEM97Q5BJF2 176 aa10.54□□□□□ -0.72
TVP23A-207ENST00000573360 LINC01545Q5VT33 79 aa10.54□□□□□ -0.72
TVP23A-207ENST00000573360 C16orf54Q6UWD8 224 aa10.54□□□□□ -0.72
TVP23A-207ENST00000573360 GATA1P15976 413 aaPredicted RBP10.54□□□□□ -0.72
TVP23A-207ENST00000573360 AGPAT4-IT1Q9H0P7 198 aa10.54□□□□□ -0.72
TVP23A-207ENST00000573360 SCGB2A2Q13296 93 aa10.53□□□□□ -0.72
TVP23A-207ENST00000573360 VWFP04275 2813 aa10.53□□□□□ -0.72
TVP23A-207ENST00000573360 NBEAL2Q6ZNJ1 2754 aa10.53□□□□□ -0.72
TVP23A-207ENST00000573360 GAGE10A6NGK3 116 aa10.53□□□□□ -0.72
TVP23A-207ENST00000573360 MAP1LC3AQ9H492 121 aa10.53□□□□□ -0.72
TVP23A-207ENST00000573360 CYSRT1A8MQ03 144 aa10.53□□□□□ -0.72
TVP23A-207ENST00000573360 LINC01619G3V211 115 aa10.53□□□□□ -0.72
TVP23A-207ENST00000573360 LEPP41159 167 aa10.53□□□□□ -0.72
TVP23A-207ENST00000573360 OR10J6PQ8NGY7 276 aa10.53□□□□□ -0.72
TVP23A-207ENST00000573360 TRAV8-2A0A0B4J237 113 aa10.52□□□□□ -0.72
TVP23A-207ENST00000573360 FABP5P3A8MUU1 101 aa10.52□□□□□ -0.72
TVP23A-207ENST00000573360 H3BUT2 72 aa10.52□□□□□ -0.72
TVP23A-207ENST00000573360 COX8AP10176 69 aa10.52□□□□□ -0.72
TVP23A-207ENST00000573360 PDE6HQ13956 83 aa10.52□□□□□ -0.72
TVP23A-207ENST00000573360 DKK2Q9UBU2 259 aa10.52□□□□□ -0.72
TVP23A-207ENST00000573360 TRAV12-2A0A075B6T6 113 aa10.52□□□□□ -0.73
TVP23A-207ENST00000573360 SMIM15Q7Z3B0 74 aa10.52□□□□□ -0.73
TVP23A-207ENST00000573360 NACAE9PAV3 2078 aa10.52□□□□□ -0.73
TVP23A-207ENST00000573360 RNASE4P34096 147 aaKnown RBP10.52□□□□□ -0.73
TVP23A-207ENST00000573360 SLC50A1Q9BRV3 221 aa10.52□□□□□ -0.73
TVP23A-207ENST00000573360 TRAV8-6A0A0B4J262 113 aa10.51□□□□□ -0.73
TVP23A-207ENST00000573360 GAS8-AS1O95177 125 aa10.51□□□□□ -0.73
TVP23A-207ENST00000573360 FCER1GP30273 86 aa10.51□□□□□ -0.73
TVP23A-207ENST00000573360 DEFB125Q8N687 156 aa10.51□□□□□ -0.73
TVP23A-207ENST00000573360 CCL24O00175 119 aa10.51□□□□□ -0.73
TVP23A-207ENST00000573360 GCSHP23434 173 aa10.51□□□□□ -0.73
TVP23A-207ENST00000573360 TTTY13Q9BZ97 58 aa10.51□□□□□ -0.73
TVP23A-207ENST00000573360 SAP30O75446 220 aa10.51□□□□□ -0.73
TVP23A-207ENST00000573360 HILS1P60008 231 aa10.51□□□□□ -0.73
TVP23A-207ENST00000573360 PCP2Q8IVA1 136 aa10.51□□□□□ -0.73
TVP23A-207ENST00000573360 SPANXN1Q5VSR9 72 aa10.5□□□□□ -0.73
TVP23A-207ENST00000573360 KNCNA6PVL3 124 aa10.5□□□□□ -0.73
TVP23A-207ENST00000573360 RPS20P60866 119 aaKnown RBP10.5□□□□□ -0.73
TVP23A-207ENST00000573360 IGHV3OR16-12A0A075B7B8 117 aa10.49□□□□□ -0.73
TVP23A-207ENST00000573360 PF4P02776 101 aa10.49□□□□□ -0.73
TVP23A-207ENST00000573360 DEFB131AP59861 70 aa10.49□□□□□ -0.73
TVP23A-207ENST00000573360 GPHB5Q86YW7 130 aa10.49□□□□□ -0.73
TVP23A-207ENST00000573360 APRG1Q8IVJ8 170 aa10.49□□□□□ -0.73
TVP23A-207ENST00000573360 TMEM61Q8N0U2 210 aa10.49□□□□□ -0.73
TVP23A-207ENST00000573360 TMEM160Q9NX00 188 aa10.49□□□□□ -0.73
TVP23A-207ENST00000573360 A6NDN8 102 aa10.49□□□□□ -0.73
TVP23A-207ENST00000573360 RAX2Q96IS3 184 aa10.49□□□□□ -0.73
TVP23A-207ENST00000573360 TRAV26-2A0A0B4J265 109 aa10.49□□□□□ -0.73
TVP23A-207ENST00000573360 DEFB104AQ8WTQ1 72 aa10.49□□□□□ -0.73
TVP23A-207ENST00000573360 S100A4P26447 101 aaKnown RBP10.48□□□□□ -0.73
TVP23A-207ENST00000573360 A0A096LNJ9 63 aa10.48□□□□□ -0.73
TVP23A-207ENST00000573360 RNASE1P07998 156 aaKnown RBP10.48□□□□□ -0.73
TVP23A-207ENST00000573360 ID1P41134 155 aa10.48□□□□□ -0.73
TVP23A-207ENST00000573360 SNRPD3P62318 126 aaKnown RBP10.48□□□□□ -0.73
TVP23A-207ENST00000573360 GTSCR1Q86UQ5 136 aa10.48□□□□□ -0.73
TVP23A-207ENST00000573360 OR9G4Q8NGQ1 327 aa10.48□□□□□ -0.73
TVP23A-207ENST00000573360 CST9LQ9H4G1 147 aa10.48□□□□□ -0.73
TVP23A-207ENST00000573360 TRBV6-1A0A0K0K1D8 114 aa10.47□□□□□ -0.73
TVP23A-207ENST00000573360 GAGE12BA1L429 117 aa10.47□□□□□ -0.73
TVP23A-207ENST00000573360 FBLL1A6NHQ2 334 aaKnown RBP10.47□□□□□ -0.73
TVP23A-207ENST00000573360 TNFRSF6BO95407 300 aa10.47□□□□□ -0.73
TVP23A-207ENST00000573360 SPINK13Q1W4C9 94 aa10.47□□□□□ -0.73
TVP23A-207ENST00000573360 TRAV12-3A0A0B4J271 114 aa10.47□□□□□ -0.73
TVP23A-207ENST00000573360 TMEM86BQ8N661 226 aa10.47□□□□□ -0.73
TVP23A-207ENST00000573360 TMEM158Q8WZ71 300 aa10.47□□□□□ -0.73
TVP23A-207ENST00000573360 NOTCH1P46531 2555 aa10.47□□□□□ -0.73
TVP23A-207ENST00000573360 CD300EQ496F6 205 aaPredicted RBP10.47□□□□□ -0.73
TVP23A-207ENST00000573360 U3KQE9 123 aa10.47□□□□□ -0.73
TVP23A-207ENST00000573360 C2orf91Q6ZV80 131 aa10.46□□□□□ -0.73
TVP23A-207ENST00000573360 JMJD8Q96S16 334 aa10.46□□□□□ -0.73
TVP23A-207ENST00000573360 K7EMI3 77 aa10.46□□□□□ -0.73
TVP23A-207ENST00000573360 M0R381 172 aa10.46□□□□□ -0.73
TVP23A-207ENST00000573360 ZNF493Q6ZR52 646 aa10.46□□□□□ -0.73
TVP23A-207ENST00000573360 PRM2P04554 102 aa10.46□□□□□ -0.74
TVP23A-207ENST00000573360 LGALS9BQ3B8N2 356 aa10.46□□□□□ -0.74
TVP23A-207ENST00000573360 LGALS9CQ6DKI2 356 aa10.46□□□□□ -0.74
TVP23A-207ENST00000573360 PEMTQ9UBM1 199 aa10.45□□□□□ -0.74
TVP23A-207ENST00000573360 H3BVH4 76 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms