RNA–Protein interactions for RNA: ENST00000573169.1

NUP88-206, Transcript of nucleoporin 88, humanhuman

TSL 1 (best)

Gene NUP88, Length 1,195 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-206ENST00000573169 TEX48A0A1B0GUV7 120 aa5.07□□□□□ -1.6
NUP88-206ENST00000573169 K7EIM0 57 aa5.07□□□□□ -1.6
NUP88-206ENST00000573169 SH2D1AO60880 128 aa5.07□□□□□ -1.6
NUP88-206ENST00000573169 NPYP01303 97 aa5.07□□□□□ -1.6
NUP88-206ENST00000573169 IGHV1-8P0DP01 117 aa5.07□□□□□ -1.6
NUP88-206ENST00000573169 BMI1P35226 326 aa5.07□□□□□ -1.6
NUP88-206ENST00000573169 SAA4P35542 130 aa5.07□□□□□ -1.6
NUP88-206ENST00000573169 DIAPH2-AS1Q14236 149 aa5.07□□□□□ -1.6
NUP88-206ENST00000573169 LY6EQ16553 131 aa5.07□□□□□ -1.6
NUP88-206ENST00000573169 TCTEX1D4Q5JR98 221 aa5.07□□□□□ -1.6
NUP88-206ENST00000573169 HCP5Q6MZN7 132 aa5.07□□□□□ -1.6
NUP88-206ENST00000573169 PPP1R27Q86WC6 154 aa5.07□□□□□ -1.6
NUP88-206ENST00000573169 CEND1Q8N111 149 aa5.07□□□□□ -1.6
NUP88-206ENST00000573169 ATP6V0E2Q8NHE4 81 aa5.07□□□□□ -1.6
NUP88-206ENST00000573169 ARPC1AQ92747 370 aa5.07□□□□□ -1.6
NUP88-206ENST00000573169 RNF185Q96GF1 192 aa5.07□□□□□ -1.6
NUP88-206ENST00000573169 RASL11BQ9BPW5 248 aa5.07□□□□□ -1.6
NUP88-206ENST00000573169 TMEM133Q9H2Q1 129 aa5.07□□□□□ -1.6
NUP88-206ENST00000573169 MAP1LC3AQ9H492 121 aa5.07□□□□□ -1.6
NUP88-206ENST00000573169 PRO0461Q9UI25 63 aa5.07□□□□□ -1.6
NUP88-206ENST00000573169 TNCP24821 2201 aa5.07□□□□□ -1.6
NUP88-206ENST00000573169 VWFP04275 2813 aa5.06□□□□□ -1.6
NUP88-206ENST00000573169 TRBV25-1A0A075B6N4 114 aa5.06□□□□□ -1.6
NUP88-206ENST00000573169 TMEM213A2RRL7 107 aa5.06□□□□□ -1.6
NUP88-206ENST00000573169 GAGE12HA6NDE8 117 aa5.06□□□□□ -1.6
NUP88-206ENST00000573169 IGLL5B9A064 214 aa5.06□□□□□ -1.6
NUP88-206ENST00000573169 LY6LH3BQJ8 138 aa5.06□□□□□ -1.6
NUP88-206ENST00000573169 H3BUX3 64 aa5.06□□□□□ -1.6
NUP88-206ENST00000573169 TIMM23O14925 209 aa5.06□□□□□ -1.6
NUP88-206ENST00000573169 SNAI2O43623 268 aa5.06□□□□□ -1.6
NUP88-206ENST00000573169 DPM2O94777 84 aa5.06□□□□□ -1.6
NUP88-206ENST00000573169 IGHV3-48P01763 117 aa5.06□□□□□ -1.6
NUP88-206ENST00000573169 IGKCP01834 107 aa5.06□□□□□ -1.6
NUP88-206ENST00000573169 FCGR2BP31994 310 aaPredicted RBP5.06□□□□□ -1.6
NUP88-206ENST00000573169 CKS2P33552 79 aa5.06□□□□□ -1.6
NUP88-206ENST00000573169 FXYD2P54710 66 aa5.06□□□□□ -1.6
NUP88-206ENST00000573169 LYZP61626 148 aa5.06□□□□□ -1.6
NUP88-206ENST00000573169 C1orf122Q6ZSJ8 110 aa5.06□□□□□ -1.6
NUP88-206ENST00000573169 AMN1Q8IY45 258 aa5.06□□□□□ -1.6
NUP88-206ENST00000573169 Q8N8P6 123 aa5.06□□□□□ -1.6
NUP88-206ENST00000573169 C11orf44Q8N8P7 122 aa5.06□□□□□ -1.6
NUP88-206ENST00000573169 RNF125Q96EQ8 232 aa5.06□□□□□ -1.6
NUP88-206ENST00000573169 AJUBAQ96IF1 538 aa5.06□□□□□ -1.6
NUP88-206ENST00000573169 PRR25Q96S07 402 aa5.06□□□□□ -1.6
NUP88-206ENST00000573169 CHAC1Q9BUX1 264 aa5.06□□□□□ -1.6
NUP88-206ENST00000573169 C16orf95Q9H693 158 aa5.06□□□□□ -1.6
NUP88-206ENST00000573169 DKK2Q9UBU2 259 aa5.06□□□□□ -1.6
NUP88-206ENST00000573169 VPREB3Q9UKI3 123 aa5.06□□□□□ -1.6
NUP88-206ENST00000573169 HILPDAQ9Y5L2 63 aa5.06□□□□□ -1.6
NUP88-206ENST00000573169 IGHV4-4A0A075B6R2 117 aa5.05□□□□□ -1.6
NUP88-206ENST00000573169 IGKV2D-26A0A0A0MRZ7 120 aa5.05□□□□□ -1.6
NUP88-206ENST00000573169 TRAV12-1A0A0B4J245 112 aa5.05□□□□□ -1.6
NUP88-206ENST00000573169 IGHV1-3A0A0C4DH29 117 aa5.05□□□□□ -1.6
NUP88-206ENST00000573169 A0A1B0GV72 72 aa5.05□□□□□ -1.6
NUP88-206ENST00000573169 RBAKDNA6NC62 111 aa5.05□□□□□ -1.6
NUP88-206ENST00000573169 NPIPB5A8MRT5 1133 aa5.05□□□□□ -1.6
NUP88-206ENST00000573169 H3BTX0 84 aa5.05□□□□□ -1.6
NUP88-206ENST00000573169 PRB2P02812 416 aaPredicted RBP5.05□□□□□ -1.6
NUP88-206ENST00000573169 AZU1P20160 251 aa5.05□□□□□ -1.6
NUP88-206ENST00000573169 COX7A1P24310 79 aa5.05□□□□□ -1.6
NUP88-206ENST00000573169 S100A7P31151 101 aa5.05□□□□□ -1.6
NUP88-206ENST00000573169 UBE2E1P51965 193 aa5.05□□□□□ -1.6
NUP88-206ENST00000573169 MTURNQ8N3F0 131 aa5.05□□□□□ -1.6
NUP88-206ENST00000573169 NPBQ8NG41 125 aa5.05□□□□□ -1.6
NUP88-206ENST00000573169 C17orf77Q96MU5 243 aa5.05□□□□□ -1.6
NUP88-206ENST00000573169 C18orf15Q96N68 181 aa5.05□□□□□ -1.6
NUP88-206ENST00000573169 ATP6V0BQ99437 205 aa5.05□□□□□ -1.6
NUP88-206ENST00000573169 KRTAP9-8Q9BYQ0 159 aa5.05□□□□□ -1.6
NUP88-206ENST00000573169 AAMDCQ9H7C9 122 aa5.05□□□□□ -1.6
NUP88-206ENST00000573169 TGP01266 2768 aa5.04□□□□□ -1.6
NUP88-206ENST00000573169 TRBV7-3A0A075B6L6 115 aa5.04□□□□□ -1.6
NUP88-206ENST00000573169 H0Y8G0 127 aa5.04□□□□□ -1.6
NUP88-206ENST00000573169 BUB1B-PAK6H3BSN5 160 aa5.04□□□□□ -1.6
NUP88-206ENST00000573169 K7EMI3 77 aa5.04□□□□□ -1.6
NUP88-206ENST00000573169 M0R1W7 72 aa5.04□□□□□ -1.6
NUP88-206ENST00000573169 NDUFA3O95167 84 aa5.04□□□□□ -1.6
NUP88-206ENST00000573169 TNFRSF6BO95407 300 aa5.04□□□□□ -1.6
NUP88-206ENST00000573169 IGHG4P01861 327 aa5.04□□□□□ -1.6
NUP88-206ENST00000573169 MED14OSP0DP75 135 aa5.04□□□□□ -1.6
NUP88-206ENST00000573169 EGR2P11161 476 aaPredicted RBP5.04□□□□□ -1.6
NUP88-206ENST00000573169 RPL7P18124 248 aaKnown RBP5.04□□□□□ -1.6
NUP88-206ENST00000573169 NMUP48645 174 aa5.04□□□□□ -1.6
NUP88-206ENST00000573169 TWIST1Q15672 202 aa5.04□□□□□ -1.6
NUP88-206ENST00000573169 RRN3P1Q2M238 152 aa5.04□□□□□ -1.6
NUP88-206ENST00000573169 C12orf74Q32Q52 190 aa5.04□□□□□ -1.6
NUP88-206ENST00000573169 DYNAPQ8N1N2 210 aa5.04□□□□□ -1.6
NUP88-206ENST00000573169 C8orf49Q96NF6 230 aa5.04□□□□□ -1.6
NUP88-206ENST00000573169 IGLV11-55A0A075B6I3 123 aa5.03□□□□□ -1.6
NUP88-206ENST00000573169 A0A087WX48 190 aa5.03□□□□□ -1.6
NUP88-206ENST00000573169 LOC389332A0A1B0GUA5 103 aa5.03□□□□□ -1.6
NUP88-206ENST00000573169 FABP5P3A8MUU1 101 aa5.03□□□□□ -1.6
NUP88-206ENST00000573169 M0R3E3 92 aa5.03□□□□□ -1.6
NUP88-206ENST00000573169 GCSHP23434 173 aa5.03□□□□□ -1.6
NUP88-206ENST00000573169 PLNP26678 52 aa5.03□□□□□ -1.6
NUP88-206ENST00000573169 LEPP41159 167 aa5.03□□□□□ -1.6
NUP88-206ENST00000573169 WFDC2Q14508 124 aa5.03□□□□□ -1.6
NUP88-206ENST00000573169 TTC9CQ8N5M4 171 aa5.03□□□□□ -1.6
NUP88-206ENST00000573169 RAB37Q96AX2 223 aa5.03□□□□□ -1.6
NUP88-206ENST00000573169 MRPL53Q96EL3 112 aaKnown RBP5.03□□□□□ -1.6
NUP88-206ENST00000573169 ZNF479Q96JC4 524 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms