RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 HIST1H4GQ99525 98 aa7.7□□□□□ -1.18
SMG6-213ENST00000573166 ST20Q9HBF5 79 aa7.7□□□□□ -1.18
SMG6-213ENST00000573166 DAD1P61803 113 aa7.7□□□□□ -1.18
SMG6-213ENST00000573166 ZFAND3Q9H8U3 227 aa7.7□□□□□ -1.18
SMG6-213ENST00000573166 LENEPQ9Y5L5 61 aa7.7□□□□□ -1.18
SMG6-213ENST00000573166 IGLL1P15814 213 aa7.69□□□□□ -1.18
SMG6-213ENST00000573166 NIT1Q86X76 327 aa7.69□□□□□ -1.18
SMG6-213ENST00000573166 PRADC1Q9BSG0 188 aa7.69□□□□□ -1.18
SMG6-213ENST00000573166 ALKBH7Q9BT30 221 aaPredicted RBP7.69□□□□□ -1.18
SMG6-213ENST00000573166 SMAD5-AS1Q9Y6J3 95 aa7.69□□□□□ -1.18
SMG6-213ENST00000573166 Q6ZVH6 145 aa7.69□□□□□ -1.18
SMG6-213ENST00000573166 ATP5L2Q7Z4Y8 100 aa7.69□□□□□ -1.18
SMG6-213ENST00000573166 CSTL1Q9H114 145 aa7.69□□□□□ -1.18
SMG6-213ENST00000573166 COL12A1Q99715 3063 aa7.69□□□□□ -1.18
SMG6-213ENST00000573166 GAGE12BA1L429 117 aa7.69□□□□□ -1.18
SMG6-213ENST00000573166 RBAKDNA6NC62 111 aa7.69□□□□□ -1.18
SMG6-213ENST00000573166 GAGE7O76087 117 aa7.69□□□□□ -1.18
SMG6-213ENST00000573166 PPBPP02775 128 aa7.69□□□□□ -1.18
SMG6-213ENST00000573166 GAGE12FP0CL80 117 aa7.69□□□□□ -1.18
SMG6-213ENST00000573166 GAGE12GP0CL81 117 aa7.69□□□□□ -1.18
SMG6-213ENST00000573166 GAGE12IP0CL82 117 aa7.69□□□□□ -1.18
SMG6-213ENST00000573166 DNLZQ5SXM8 178 aa7.69□□□□□ -1.18
SMG6-213ENST00000573166 TRAV9-2A0A087WT02 112 aa7.68□□□□□ -1.18
SMG6-213ENST00000573166 SNAI2O43623 268 aa7.68□□□□□ -1.18
SMG6-213ENST00000573166 EVI2AP22794 236 aa7.68□□□□□ -1.18
SMG6-213ENST00000573166 KLF5Q13887 457 aaPredicted RBP7.68□□□□□ -1.18
SMG6-213ENST00000573166 DPH3P1Q9H4G8 78 aa7.68□□□□□ -1.18
SMG6-213ENST00000573166 Q6ZWC4 215 aa7.68□□□□□ -1.18
SMG6-213ENST00000573166 MAST4O15021 2626 aa7.68□□□□□ -1.18
SMG6-213ENST00000573166 F5H768 121 aa7.68□□□□□ -1.18
SMG6-213ENST00000573166 NCR2O95944 276 aa7.68□□□□□ -1.18
SMG6-213ENST00000573166 RPL36AP83881 106 aaKnown RBP7.68□□□□□ -1.18
SMG6-213ENST00000573166 RPL36ALQ969Q0 106 aaKnown RBP7.68□□□□□ -1.18
SMG6-213ENST00000573166 PYGO2Q9BRQ0 406 aa7.68□□□□□ -1.18
SMG6-213ENST00000573166 NPSP0C0P6 89 aa7.67□□□□□ -1.18
SMG6-213ENST00000573166 DEFB125Q8N687 156 aa7.67□□□□□ -1.18
SMG6-213ENST00000573166 OR11H2Q8NH07 326 aa7.67□□□□□ -1.18
SMG6-213ENST00000573166 KALRNO60229 2985 aa7.67□□□□□ -1.18
SMG6-213ENST00000573166 MTURNQ8N3F0 131 aa7.67□□□□□ -1.18
SMG6-213ENST00000573166 C2orf88Q9BSF0 95 aa7.67□□□□□ -1.18
SMG6-213ENST00000573166 LTAP01374 205 aa7.67□□□□□ -1.18
SMG6-213ENST00000573166 CRIP2P52943 208 aaPredicted RBP7.67□□□□□ -1.18
SMG6-213ENST00000573166 SMIM13P0DJ93 91 aa7.67□□□□□ -1.18
SMG6-213ENST00000573166 AZU1P20160 251 aa7.67□□□□□ -1.18
SMG6-213ENST00000573166 C19orf54Q5BKX5 351 aa7.67□□□□□ -1.18
SMG6-213ENST00000573166 PAPPA-AS1Q5QFB9 102 aa7.67□□□□□ -1.18
SMG6-213ENST00000573166 MORN3Q6PF18 240 aaPredicted RBP7.67□□□□□ -1.18
SMG6-213ENST00000573166 TMEM101Q96IK0 257 aa7.67□□□□□ -1.18
SMG6-213ENST00000573166 C18orf15Q96N68 181 aa7.67□□□□□ -1.18
SMG6-213ENST00000573166 MAP6D1Q9H9H5 199 aa7.67□□□□□ -1.18
SMG6-213ENST00000573166 A0A087X0K7 114 aa7.66□□□□□ -1.18
SMG6-213ENST00000573166 DEFB104AQ8WTQ1 72 aa7.66□□□□□ -1.18
SMG6-213ENST00000573166 ZNF503Q96F45 646 aa7.66□□□□□ -1.18
SMG6-213ENST00000573166 CHCHD5Q9BSY4 110 aa7.66□□□□□ -1.18
SMG6-213ENST00000573166 IGHV3-16A0A0C4DH30 117 aa7.66□□□□□ -1.18
SMG6-213ENST00000573166 K7EQG2 157 aa7.66□□□□□ -1.18
SMG6-213ENST00000573166 GNRH2O43555 120 aa7.66□□□□□ -1.18
SMG6-213ENST00000573166 COX6CP09669 75 aa7.66□□□□□ -1.18
SMG6-213ENST00000573166 TRAV8-6A0A0B4J262 113 aa7.66□□□□□ -1.18
SMG6-213ENST00000573166 A0A0J9YX75 114 aa7.66□□□□□ -1.18
SMG6-213ENST00000573166 LINC00614P0C842 121 aa7.66□□□□□ -1.18
SMG6-213ENST00000573166 DEFB135Q30KP9 77 aa7.66□□□□□ -1.18
SMG6-213ENST00000573166 AMN1Q8IY45 258 aa7.66□□□□□ -1.18
SMG6-213ENST00000573166 MGAM2Q2M2H8 2515 aa7.66□□□□□ -1.18
SMG6-213ENST00000573166 D6R8Y8 96 aa7.65□□□□□ -1.18
SMG6-213ENST00000573166 K7EN84 100 aa7.65□□□□□ -1.18
SMG6-213ENST00000573166 ATP5LO75964 103 aa7.65□□□□□ -1.18
SMG6-213ENST00000573166 CT83Q5H943 113 aa7.65□□□□□ -1.18
SMG6-213ENST00000573166 FAM231DQ6ZW35 169 aa7.65□□□□□ -1.18
SMG6-213ENST00000573166 C16orf95Q9H693 158 aa7.65□□□□□ -1.18
SMG6-213ENST00000573166 GCN1Q92616 2671 aaKnown RBP7.65□□□□□ -1.18
SMG6-213ENST00000573166 RHODO00212 210 aa7.65□□□□□ -1.18
SMG6-213ENST00000573166 DSCAML1Q8TD84 2053 aa7.65□□□□□ -1.18
SMG6-213ENST00000573166 FAM231BA6NCW3 169 aa7.65□□□□□ -1.19
SMG6-213ENST00000573166 GFRA4Q9GZZ7 299 aa7.65□□□□□ -1.19
SMG6-213ENST00000573166 NOP10Q9NPE3 64 aaKnown RBP7.65□□□□□ -1.19
SMG6-213ENST00000573166 MRPL16Q9NX20 251 aaKnown RBP7.64□□□□□ -1.19
SMG6-213ENST00000573166 ZZEF1O43149 2961 aa7.64□□□□□ -1.19
SMG6-213ENST00000573166 PRSS2P07478 247 aa7.64□□□□□ -1.19
SMG6-213ENST00000573166 C9orf47Q6ZRZ4 202 aa7.64□□□□□ -1.19
SMG6-213ENST00000573166 UBE2DNLQ8IWF7 75 aa7.64□□□□□ -1.19
SMG6-213ENST00000573166 OR2K2Q8NGT1 345 aa7.64□□□□□ -1.19
SMG6-213ENST00000573166 IGF2BP2-AS1Q96M15 143 aa7.64□□□□□ -1.19
SMG6-213ENST00000573166 SPXQ9BT56 116 aa7.64□□□□□ -1.19
SMG6-213ENST00000573166 NXT2Q9NPJ8 142 aaKnown RBP7.64□□□□□ -1.19
SMG6-213ENST00000573166 A0A087WX48 190 aa7.64□□□□□ -1.19
SMG6-213ENST00000573166 A0A096LNT2 108 aa7.64□□□□□ -1.19
SMG6-213ENST00000573166 A8MWV9 139 aa7.64□□□□□ -1.19
SMG6-213ENST00000573166 DLEU1O43261 78 aa7.64□□□□□ -1.19
SMG6-213ENST00000573166 SCGB3A1Q96QR1 104 aa7.64□□□□□ -1.19
SMG6-213ENST00000573166 GEMIN7Q9H840 131 aaKnown RBP7.64□□□□□ -1.19
SMG6-213ENST00000573166 ASPMQ8IZT6 3477 aa7.64□□□□□ -1.19
SMG6-213ENST00000573166 SPRY2O43597 315 aa7.63□□□□□ -1.19
SMG6-213ENST00000573166 TTC32Q5I0X7 151 aa7.63□□□□□ -1.19
SMG6-213ENST00000573166 ZNF580Q9UK33 172 aa7.63□□□□□ -1.19
SMG6-213ENST00000573166 V9GYV3 84 aa7.63□□□□□ -1.19
SMG6-213ENST00000573166 SMKR1H3BMG3 65 aa7.63□□□□□ -1.19
SMG6-213ENST00000573166 HLA-DRB4P13762 266 aa7.63□□□□□ -1.19
SMG6-213ENST00000573166 PROK1P58294 105 aa7.63□□□□□ -1.19
SMG6-213ENST00000573166 HLA-DRB4X5D2U9 266 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms