RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 IQCF2Q8IXL9 164 aa5.13□□□□□ -1.59
NUP88-205ENST00000572809 C6orf223Q8N319 242 aa5.13□□□□□ -1.59
NUP88-205ENST00000572809 RASL10AQ92737 203 aa5.13□□□□□ -1.59
NUP88-205ENST00000572809 KCNS1Q96KK3 526 aa5.13□□□□□ -1.59
NUP88-205ENST00000572809 NDFIP1Q9BT67 221 aa5.13□□□□□ -1.59
NUP88-205ENST00000572809 UPK3BQ9BT76 320 aa5.13□□□□□ -1.59
NUP88-205ENST00000572809 NAGKQ9UJ70 344 aa5.13□□□□□ -1.59
NUP88-205ENST00000572809 PSG8Q9UQ74 426 aa5.13□□□□□ -1.59
NUP88-205ENST00000572809 TRGV4A0A0C4DH28 118 aa5.12□□□□□ -1.59
NUP88-205ENST00000572809 IGHV3-16A0A0C4DH30 117 aa5.12□□□□□ -1.59
NUP88-205ENST00000572809 CTXND1A0A1B0GTU2 59 aa5.12□□□□□ -1.59
NUP88-205ENST00000572809 A0A1W2PRE2 83 aa5.12□□□□□ -1.59
NUP88-205ENST00000572809 FBLL1A6NHQ2 334 aaKnown RBP5.12□□□□□ -1.59
NUP88-205ENST00000572809 G3V3Q6 166 aa5.12□□□□□ -1.59
NUP88-205ENST00000572809 M0R2P5 195 aa5.12□□□□□ -1.59
NUP88-205ENST00000572809 ARPC5O15511 151 aa5.12□□□□□ -1.59
NUP88-205ENST00000572809 SFTA3P0C7M3 94 aa5.12□□□□□ -1.59
NUP88-205ENST00000572809 FLI1Q01543 452 aaPredicted RBP5.12□□□□□ -1.59
NUP88-205ENST00000572809 ZNF726P1Q15940 193 aa5.12□□□□□ -1.59
NUP88-205ENST00000572809 MRPL23Q16540 153 aaKnown RBP5.12□□□□□ -1.59
NUP88-205ENST00000572809 SAPCD1Q5SSQ6 148 aa5.12□□□□□ -1.59
NUP88-205ENST00000572809 AKR1C8PQ5T2L2 129 aa5.12□□□□□ -1.59
NUP88-205ENST00000572809 PRNTQ86SH4 94 aa5.12□□□□□ -1.59
NUP88-205ENST00000572809 ZNF479Q96JC4 524 aa5.12□□□□□ -1.59
NUP88-205ENST00000572809 TM2D2Q9BX73 214 aa5.12□□□□□ -1.59
NUP88-205ENST00000572809 SDF2L1Q9HCN8 221 aa5.12□□□□□ -1.59
NUP88-205ENST00000572809 CYTL1Q9NRR1 136 aa5.12□□□□□ -1.59
NUP88-205ENST00000572809 MRPS16Q9Y3D3 137 aaKnown RBP5.12□□□□□ -1.59
NUP88-205ENST00000572809 TNFRSF18Q9Y5U5 241 aa5.12□□□□□ -1.59
NUP88-205ENST00000572809 ICOSQ9Y6W8 199 aa5.12□□□□□ -1.59
NUP88-205ENST00000572809 A0A1W2PPQ1 181 aa5.11□□□□□ -1.59
NUP88-205ENST00000572809 GGTLC3B5MD39 225 aa5.11□□□□□ -1.59
NUP88-205ENST00000572809 SMLR1H3BR10 107 aa5.11□□□□□ -1.59
NUP88-205ENST00000572809 GCGP01275 180 aa5.11□□□□□ -1.59
NUP88-205ENST00000572809 IFNA7P01567 189 aa5.11□□□□□ -1.59
NUP88-205ENST00000572809 IGLV2-11P01706 119 aa5.11□□□□□ -1.59
NUP88-205ENST00000572809 TYMSP04818 313 aa5.11□□□□□ -1.59
NUP88-205ENST00000572809 ZNF80P51504 273 aaPredicted RBP5.11□□□□□ -1.59
NUP88-205ENST00000572809 SMUG1Q53HV7 270 aa5.11□□□□□ -1.59
NUP88-205ENST00000572809 TTC32Q5I0X7 151 aa5.11□□□□□ -1.59
NUP88-205ENST00000572809 LYPD5Q6UWN5 251 aa5.11□□□□□ -1.59
NUP88-205ENST00000572809 NEGR1Q7Z3B1 354 aa5.11□□□□□ -1.59
NUP88-205ENST00000572809 CYB561D1Q8N8Q1 229 aa5.11□□□□□ -1.59
NUP88-205ENST00000572809 TMEM75Q8N9X5 138 aa5.11□□□□□ -1.59
NUP88-205ENST00000572809 OR4C5Q8NGB2 326 aa5.11□□□□□ -1.59
NUP88-205ENST00000572809 NKX6-2Q9C056 277 aaPredicted RBP5.11□□□□□ -1.59
NUP88-205ENST00000572809 TRAV4A0A0B4J268 109 aa5.1□□□□□ -1.59
NUP88-205ENST00000572809 TRAV34A0A0B4J273 112 aa5.1□□□□□ -1.59
NUP88-205ENST00000572809 HMSDA8MTL9 139 aa5.1□□□□□ -1.59
NUP88-205ENST00000572809 FABP5P3A8MUU1 101 aa5.1□□□□□ -1.59
NUP88-205ENST00000572809 C9JCJ5 164 aa5.1□□□□□ -1.59
NUP88-205ENST00000572809 SIVA1O15304 175 aa5.1□□□□□ -1.59
NUP88-205ENST00000572809 ORM1P02763 201 aa5.1□□□□□ -1.59
NUP88-205ENST00000572809 PFN1P07737 140 aaKnown RBP5.1□□□□□ -1.59
NUP88-205ENST00000572809 PPT1P50897 306 aa5.1□□□□□ -1.59
NUP88-205ENST00000572809 FGF8P55075 233 aaPredicted RBP5.1□□□□□ -1.59
NUP88-205ENST00000572809 UBE2G2P60604 165 aa5.1□□□□□ -1.59
NUP88-205ENST00000572809 ZFP69Q49AA0 526 aa5.1□□□□□ -1.59
NUP88-205ENST00000572809 KCNRGQ8N5I3 272 aa5.1□□□□□ -1.59
NUP88-205ENST00000572809 LINC00479Q96M42 142 aa5.1□□□□□ -1.59
NUP88-205ENST00000572809 MUC4Q99102 2169 aa5.1□□□□□ -1.59
NUP88-205ENST00000572809 DNAH2Q9P225 4427 aa5.09□□□□□ -1.59
NUP88-205ENST00000572809 A0A0D9SG52 128 aa5.09□□□□□ -1.59
NUP88-205ENST00000572809 FAM74A7A6NL05 159 aa5.09□□□□□ -1.59
NUP88-205ENST00000572809 K7EQD1 137 aa5.09□□□□□ -1.59
NUP88-205ENST00000572809 CIDEAO60543 219 aa5.09□□□□□ -1.59
NUP88-205ENST00000572809 NXPH4O95158 308 aa5.09□□□□□ -1.59
NUP88-205ENST00000572809 SRIP30626 198 aa5.09□□□□□ -1.59
NUP88-205ENST00000572809 ZNF876PQ49A33 203 aa5.09□□□□□ -1.59
NUP88-205ENST00000572809 STOML3Q8TAV4 291 aa5.09□□□□□ -1.59
NUP88-205ENST00000572809 PCNPQ8WW12 178 aaKnown RBP5.09□□□□□ -1.59
NUP88-205ENST00000572809 HIST1H2BAQ96A08 127 aa5.09□□□□□ -1.59
NUP88-205ENST00000572809 KRTAP1-5Q9BYS1 174 aa5.09□□□□□ -1.59
NUP88-205ENST00000572809 DNAH17Q9UFH2 4485 aa5.08□□□□□ -1.6
NUP88-205ENST00000572809 MAP1LC3B2A6NCE7 125 aa5.08□□□□□ -1.6
NUP88-205ENST00000572809 PEX7O00628 323 aa5.08□□□□□ -1.6
NUP88-205ENST00000572809 RS1O15537 224 aa5.08□□□□□ -1.6
NUP88-205ENST00000572809 SEC11BP0C7V7 166 aa5.08□□□□□ -1.6
NUP88-205ENST00000572809 ZNF345Q14585 488 aa5.08□□□□□ -1.6
NUP88-205ENST00000572809 SERTAD4-AS1Q5TG53 156 aa5.08□□□□□ -1.6
NUP88-205ENST00000572809 CST9LP1Q5W188 147 aa5.08□□□□□ -1.6
NUP88-205ENST00000572809 OR11H4Q8NGC9 324 aa5.08□□□□□ -1.6
NUP88-205ENST00000572809 PTH2Q96A98 100 aa5.08□□□□□ -1.6
NUP88-205ENST00000572809 C9orf85Q96MD7 179 aa5.08□□□□□ -1.6
NUP88-205ENST00000572809 TXNDC17Q9BRA2 123 aa5.08□□□□□ -1.6
NUP88-205ENST00000572809 MAP1LC3BQ9GZQ8 125 aa5.08□□□□□ -1.6
NUP88-205ENST00000572809 ZFP30Q9Y2G7 519 aa5.08□□□□□ -1.6
NUP88-205ENST00000572809 ARL2-SNX15V9GYD0 113 aa5.08□□□□□ -1.6
NUP88-205ENST00000572809 HECTD4Q9Y4D8 3996 aa5.07□□□□□ -1.6
NUP88-205ENST00000572809 FAT2Q9NYQ8 4349 aa5.07□□□□□ -1.6
NUP88-205ENST00000572809 TRAV9-2A0A087WT02 112 aa5.07□□□□□ -1.6
NUP88-205ENST00000572809 IGKV3D-20A0A0C4DH25 116 aa5.07□□□□□ -1.6
NUP88-205ENST00000572809 KANTRA0A1W2PQU2 76 aa5.07□□□□□ -1.6
NUP88-205ENST00000572809 UMAD1C9J7I0 102 aa5.07□□□□□ -1.6
NUP88-205ENST00000572809 RNASE3P12724 160 aaKnown RBP5.07□□□□□ -1.6
NUP88-205ENST00000572809 GATA1P15976 413 aaPredicted RBP5.07□□□□□ -1.6
NUP88-205ENST00000572809 S100A4P26447 101 aaKnown RBP5.07□□□□□ -1.6
NUP88-205ENST00000572809 FHITP49789 147 aa5.07□□□□□ -1.6
NUP88-205ENST00000572809 CRIP1P50238 77 aa5.07□□□□□ -1.6
NUP88-205ENST00000572809 UBE2G1P62253 170 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms