RNA–Protein interactions for RNA: ENST00000572428.5

TVP23A-205, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 3,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-205ENST00000572428 RBMY1CP0DJD4 496 aa6.84□□□□□ -1.31
TVP23A-205ENST00000572428 FP248Q71RG6 208 aaPredicted RBP6.84□□□□□ -1.31
TVP23A-205ENST00000572428 C15orf53Q8NAA6 179 aa6.84□□□□□ -1.31
TVP23A-205ENST00000572428 ODF3Q96PU9 254 aa6.84□□□□□ -1.31
TVP23A-205ENST00000572428 TRAV8-1A0A0A6YYK1 113 aa6.84□□□□□ -1.31
TVP23A-205ENST00000572428 MDFIC2A0A1B0GVS7 189 aa6.84□□□□□ -1.31
TVP23A-205ENST00000572428 C15orf62A8K5M9 175 aa6.84□□□□□ -1.31
TVP23A-205ENST00000572428 HAX1O00165 279 aa6.84□□□□□ -1.31
TVP23A-205ENST00000572428 P0DMU3 169 aa6.84□□□□□ -1.31
TVP23A-205ENST00000572428 FAM231AP0DMU4 169 aa6.84□□□□□ -1.31
TVP23A-205ENST00000572428 FAM231CP0DMU5 169 aa6.84□□□□□ -1.31
TVP23A-205ENST00000572428 COX7CP15954 63 aa6.84□□□□□ -1.31
TVP23A-205ENST00000572428 KRTAP10-9P60411 292 aa6.84□□□□□ -1.31
TVP23A-205ENST00000572428 LMO4P61968 165 aa6.84□□□□□ -1.31
TVP23A-205ENST00000572428 PRB3Q04118 309 aaPredicted RBP6.84□□□□□ -1.31
TVP23A-205ENST00000572428 TEN1Q86WV5 123 aa6.84□□□□□ -1.31
TVP23A-205ENST00000572428 ZNF714Q96N38 554 aa6.84□□□□□ -1.31
TVP23A-205ENST00000572428 MYO18BQ8IUG5 2567 aa6.84□□□□□ -1.31
TVP23A-205ENST00000572428 A0A096LNT2 108 aa6.84□□□□□ -1.32
TVP23A-205ENST00000572428 FAM181BA6NEQ2 426 aa6.84□□□□□ -1.32
TVP23A-205ENST00000572428 C2orf70A6NJV1 201 aa6.84□□□□□ -1.32
TVP23A-205ENST00000572428 EGR2P11161 476 aaPredicted RBP6.84□□□□□ -1.32
TVP23A-205ENST00000572428 RUSC1-AS1Q66K80 236 aa6.84□□□□□ -1.32
TVP23A-205ENST00000572428 FBN2P35556 2912 aa6.84□□□□□ -1.32
TVP23A-205ENST00000572428 TNCP24821 2201 aa6.83□□□□□ -1.32
TVP23A-205ENST00000572428 CTXND1A0A1B0GTU2 59 aa6.83□□□□□ -1.32
TVP23A-205ENST00000572428 MLANAQ16655 118 aa6.83□□□□□ -1.32
TVP23A-205ENST00000572428 TMEM14BQ9NUH8 114 aa6.83□□□□□ -1.32
TVP23A-205ENST00000572428 CR1P17927 2039 aa6.83□□□□□ -1.32
TVP23A-205ENST00000572428 PRB4P10163 310 aaPredicted RBP6.83□□□□□ -1.32
TVP23A-205ENST00000572428 MYCNOSP40205 109 aa6.83□□□□□ -1.32
TVP23A-205ENST00000572428 ZNF833PQ6ZTB9 187 aa6.83□□□□□ -1.32
TVP23A-205ENST00000572428 ATP5L2Q7Z4Y8 100 aa6.83□□□□□ -1.32
TVP23A-205ENST00000572428 CEND1Q8N111 149 aa6.83□□□□□ -1.32
TVP23A-205ENST00000572428 FAM168AQ92567 244 aa6.83□□□□□ -1.32
TVP23A-205ENST00000572428 NPCDR1Q9BY65 106 aa6.83□□□□□ -1.32
TVP23A-205ENST00000572428 BPESC1Q9GZL8 116 aa6.83□□□□□ -1.32
TVP23A-205ENST00000572428 AAMDCQ9H7C9 122 aa6.83□□□□□ -1.32
TVP23A-205ENST00000572428 SLC25A22Q9H936 323 aa6.83□□□□□ -1.32
TVP23A-205ENST00000572428 DEFB113Q30KQ7 82 aa6.82□□□□□ -1.32
TVP23A-205ENST00000572428 C1orf229Q6ZS94 237 aaPredicted RBP6.82□□□□□ -1.32
TVP23A-205ENST00000572428 TSKUQ8WUA8 353 aa6.82□□□□□ -1.32
TVP23A-205ENST00000572428 DPH3P1Q9H4G8 78 aa6.82□□□□□ -1.32
TVP23A-205ENST00000572428 UTP20O75691 2785 aaKnown RBP6.82□□□□□ -1.32
TVP23A-205ENST00000572428 PLXNB1O43157 2135 aa6.82□□□□□ -1.32
TVP23A-205ENST00000572428 M0R1W7 72 aa6.82□□□□□ -1.32
TVP23A-205ENST00000572428 SLC25A16P16260 332 aa6.82□□□□□ -1.32
TVP23A-205ENST00000572428 SUB1P53999 127 aaKnown RBP eCLIP6.82□□□□□ -1.32
TVP23A-205ENST00000572428 RPL23P62829 140 aaKnown RBP6.82□□□□□ -1.32
TVP23A-205ENST00000572428 PRR15Q8IV56 129 aa6.82□□□□□ -1.32
TVP23A-205ENST00000572428 RPP25LQ8N5L8 163 aaKnown RBP6.82□□□□□ -1.32
TVP23A-205ENST00000572428 MRPL18Q9H0U6 180 aaKnown RBP6.82□□□□□ -1.32
TVP23A-205ENST00000572428 SVEP1Q4LDE5 3571 aa6.82□□□□□ -1.32
TVP23A-205ENST00000572428 ASH1LQ9NR48 2969 aaKnown RBP6.82□□□□□ -1.32
TVP23A-205ENST00000572428 A0A1B0GXF2 115 aa6.82□□□□□ -1.32
TVP23A-205ENST00000572428 INS-IGF2F8WCM5 200 aa6.82□□□□□ -1.32
TVP23A-205ENST00000572428 KRTAP1-3Q8IUG1 177 aa6.82□□□□□ -1.32
TVP23A-205ENST00000572428 RNF182Q8N6D2 247 aa6.82□□□□□ -1.32
TVP23A-205ENST00000572428 F6UB75 175 aa6.81□□□□□ -1.32
TVP23A-205ENST00000572428 NCR2O95944 276 aa6.81□□□□□ -1.32
TVP23A-205ENST00000572428 PYYP10082 97 aa6.81□□□□□ -1.32
TVP23A-205ENST00000572428 ZNF137PP52743 207 aa6.81□□□□□ -1.32
TVP23A-205ENST00000572428 OR9G1Q8NH87 305 aa6.81□□□□□ -1.32
TVP23A-205ENST00000572428 C11orf68Q9H3H3 251 aaKnown RBP6.81□□□□□ -1.32
TVP23A-205ENST00000572428 TRGV11A0A075B6L2 103 aa6.81□□□□□ -1.32
TVP23A-205ENST00000572428 IGLL5B9A064 214 aa6.81□□□□□ -1.32
TVP23A-205ENST00000572428 UPK2O00526 184 aa6.81□□□□□ -1.32
TVP23A-205ENST00000572428 APELAP0DMC3 54 aa6.81□□□□□ -1.32
TVP23A-205ENST00000572428 IGHV1-8P0DP01 117 aa6.81□□□□□ -1.32
TVP23A-205ENST00000572428 CYP2G1PQ6ZSU1 146 aa6.81□□□□□ -1.32
TVP23A-205ENST00000572428 PLEKHA3Q9HB20 300 aa6.81□□□□□ -1.32
TVP23A-205ENST00000572428 TRAV3A0A0B4J244 114 aa6.81□□□□□ -1.32
TVP23A-205ENST00000572428 TIMM23O14925 209 aa6.81□□□□□ -1.32
TVP23A-205ENST00000572428 ZFP36P26651 326 aaKnown RBP6.81□□□□□ -1.32
TVP23A-205ENST00000572428 PAX8Q06710 450 aa6.81□□□□□ -1.32
TVP23A-205ENST00000572428 Q8N7P7 452 aa6.81□□□□□ -1.32
TVP23A-205ENST00000572428 NBPF19A0A087WUL8 3843 aa6.8□□□□□ -1.32
TVP23A-205ENST00000572428 IGKV1D-33P01593 117 aa6.8□□□□□ -1.32
TVP23A-205ENST00000572428 IGKV1-33P01594 117 aa6.8□□□□□ -1.32
TVP23A-205ENST00000572428 IGHV3-48P01763 117 aa6.8□□□□□ -1.32
TVP23A-205ENST00000572428 CCL3L1P16619 93 aa6.8□□□□□ -1.32
TVP23A-205ENST00000572428 PRCDQ00LT1 54 aa6.8□□□□□ -1.32
TVP23A-205ENST00000572428 H1FXQ92522 213 aaKnown RBP6.8□□□□□ -1.32
TVP23A-205ENST00000572428 LINC00527Q9UJ94 153 aa6.8□□□□□ -1.32
TVP23A-205ENST00000572428 CSMD1Q96PZ7 3565 aa6.8□□□□□ -1.32
TVP23A-205ENST00000572428 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.8□□□□□ -1.32
TVP23A-205ENST00000572428 IGHV4-30-2A0A087WSY4 118 aa6.8□□□□□ -1.32
TVP23A-205ENST00000572428 RPL18AQ02543 176 aaKnown RBP6.8□□□□□ -1.32
TVP23A-205ENST00000572428 PDPNQ86YL7 162 aa6.8□□□□□ -1.32
TVP23A-205ENST00000572428 USP9YO00507 2555 aaPredicted RBP6.8□□□□□ -1.32
TVP23A-205ENST00000572428 ABCA2Q9BZC7 2435 aa6.79□□□□□ -1.32
TVP23A-205ENST00000572428 TREML4Q6UXN2 200 aa6.79□□□□□ -1.32
TVP23A-205ENST00000572428 IGHV4-61A0A0C4DH41 118 aa6.79□□□□□ -1.32
TVP23A-205ENST00000572428 TRBV7-7A0A0K0K1E9 115 aa6.79□□□□□ -1.32
TVP23A-205ENST00000572428 LGALS9O00182 355 aa6.79□□□□□ -1.32
TVP23A-205ENST00000572428 IGLV1-47P01700 117 aa6.79□□□□□ -1.32
TVP23A-205ENST00000572428 FXYD2P54710 66 aa6.79□□□□□ -1.32
TVP23A-205ENST00000572428 C6orf223Q8N319 242 aa6.79□□□□□ -1.32
TVP23A-205ENST00000572428 OVOL2Q9BRP0 275 aa6.79□□□□□ -1.32
TVP23A-205ENST00000572428 SPINK4O60575 86 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms