RNA–Protein interactions for RNA: ENST00000569337.1

UBR1-210, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5

Gene UBR1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-210ENST00000569337 SFRP2Q96HF1 295 aa6.67□□□□□ -1.34
UBR1-210ENST00000569337 BIN3Q9NQY0 253 aa6.67□□□□□ -1.34
UBR1-210ENST00000569337 GSN-AS1Q9NRJ2 163 aa6.67□□□□□ -1.34
UBR1-210ENST00000569337 OSTCQ9NRP0 149 aa6.67□□□□□ -1.34
UBR1-210ENST00000569337 ALMS1Q8TCU4 4167 aa6.67□□□□□ -1.34
UBR1-210ENST00000569337 DAD1P61803 113 aa6.66□□□□□ -1.34
UBR1-210ENST00000569337 DAZAP1Q96EP5 407 aaKnown RBP6.66□□□□□ -1.34
UBR1-210ENST00000569337 C16orf74Q96GX8 76 aa6.66□□□□□ -1.34
UBR1-210ENST00000569337 KCNS1Q96KK3 526 aa6.66□□□□□ -1.34
UBR1-210ENST00000569337 NDUFAF3Q9BU61 184 aa6.66□□□□□ -1.34
UBR1-210ENST00000569337 RPP21Q9H633 154 aaKnown RBP6.66□□□□□ -1.34
UBR1-210ENST00000569337 V9GYV3 84 aa6.66□□□□□ -1.34
UBR1-210ENST00000569337 TRGV11A0A075B6L2 103 aa6.65□□□□□ -1.34
UBR1-210ENST00000569337 H3BVH4 76 aa6.65□□□□□ -1.34
UBR1-210ENST00000569337 GATCO43716 136 aaKnown RBP6.65□□□□□ -1.34
UBR1-210ENST00000569337 APOC3P02656 99 aa6.65□□□□□ -1.34
UBR1-210ENST00000569337 IGLC6P0CF74 106 aa6.65□□□□□ -1.34
UBR1-210ENST00000569337 HTN3P15516 51 aa6.65□□□□□ -1.34
UBR1-210ENST00000569337 TCL1AP56279 114 aa6.65□□□□□ -1.34
UBR1-210ENST00000569337 PNRC1Q12796 327 aaPredicted RBP6.65□□□□□ -1.34
UBR1-210ENST00000569337 RNF212Q495C1 297 aa6.65□□□□□ -1.34
UBR1-210ENST00000569337 DNLZQ5SXM8 178 aa6.65□□□□□ -1.34
UBR1-210ENST00000569337 OR10G8Q8NGN5 311 aa6.65□□□□□ -1.34
UBR1-210ENST00000569337 GTSF1Q8WW33 167 aa6.65□□□□□ -1.34
UBR1-210ENST00000569337 C9orf85Q96MD7 179 aa6.65□□□□□ -1.34
UBR1-210ENST00000569337 MUC21A0A0G2JKD1 596 aa6.64□□□□□ -1.35
UBR1-210ENST00000569337 MUC21A0A140T8X8 626 aa6.64□□□□□ -1.35
UBR1-210ENST00000569337 LYRM9A8MSI8 78 aa6.64□□□□□ -1.35
UBR1-210ENST00000569337 DEFB130BP0DP73 79 aa6.64□□□□□ -1.35
UBR1-210ENST00000569337 DEFB130AP0DP74 79 aa6.64□□□□□ -1.35
UBR1-210ENST00000569337 ZNF493Q6ZR52 646 aa6.64□□□□□ -1.35
UBR1-210ENST00000569337 C15orf54Q8N8G6 183 aa6.64□□□□□ -1.35
UBR1-210ENST00000569337 CLRN3Q8NCR9 226 aa6.64□□□□□ -1.35
UBR1-210ENST00000569337 FAM210BQ96KR6 192 aa6.64□□□□□ -1.35
UBR1-210ENST00000569337 SSBP4Q9BWG4 385 aaPredicted RBP6.64□□□□□ -1.35
UBR1-210ENST00000569337 NOP10Q9NPE3 64 aaKnown RBP6.64□□□□□ -1.35
UBR1-210ENST00000569337 SCRT2Q9NQ03 307 aa6.64□□□□□ -1.35
UBR1-210ENST00000569337 TIMM8BQ9Y5J9 83 aaPredicted RBP6.64□□□□□ -1.35
UBR1-210ENST00000569337 C7orf77A4D0Y5 90 aa6.63□□□□□ -1.35
UBR1-210ENST00000569337 SNAI2O43623 268 aa6.63□□□□□ -1.35
UBR1-210ENST00000569337 CXCL1P09341 107 aa6.63□□□□□ -1.35
UBR1-210ENST00000569337 ARMS2P0C7Q2 107 aa6.63□□□□□ -1.35
UBR1-210ENST00000569337 ASIPP42127 132 aa6.63□□□□□ -1.35
UBR1-210ENST00000569337 ZNF415Q09FC8 603 aa6.63□□□□□ -1.35
UBR1-210ENST00000569337 CT83Q5H943 113 aa6.63□□□□□ -1.35
UBR1-210ENST00000569337 ATRAIDQ6UW56 229 aa6.63□□□□□ -1.35
UBR1-210ENST00000569337 Q6ZTI0 123 aa6.63□□□□□ -1.35
UBR1-210ENST00000569337 IL36BQ9NZH7 164 aa6.63□□□□□ -1.35
UBR1-210ENST00000569337 SPINK4O60575 86 aa6.62□□□□□ -1.35
UBR1-210ENST00000569337 P0DMU3 169 aa6.62□□□□□ -1.35
UBR1-210ENST00000569337 FAM231AP0DMU4 169 aa6.62□□□□□ -1.35
UBR1-210ENST00000569337 FAM231CP0DMU5 169 aa6.62□□□□□ -1.35
UBR1-210ENST00000569337 RPS20P60866 119 aaKnown RBP6.62□□□□□ -1.35
UBR1-210ENST00000569337 DAZ2Q13117 558 aaKnown RBP6.62□□□□□ -1.35
UBR1-210ENST00000569337 LYZL1Q6UWQ5 148 aa6.62□□□□□ -1.35
UBR1-210ENST00000569337 LINC00612Q8N6U2 182 aa6.62□□□□□ -1.35
UBR1-210ENST00000569337 OR10AG1Q8NH19 301 aa6.62□□□□□ -1.35
UBR1-210ENST00000569337 TSKUQ8WUA8 353 aa6.62□□□□□ -1.35
UBR1-210ENST00000569337 MRPL16Q9NX20 251 aaKnown RBP6.62□□□□□ -1.35
UBR1-210ENST00000569337 SMIM27A0A1W2PRY6 76 aa6.61□□□□□ -1.35
UBR1-210ENST00000569337 A8MWL6 223 aa6.61□□□□□ -1.35
UBR1-210ENST00000569337 SNURFLB1AK76 121 aa6.61□□□□□ -1.35
UBR1-210ENST00000569337 MT-ND4LP03901 98 aa6.61□□□□□ -1.35
UBR1-210ENST00000569337 OR5AL1P0C617 328 aa6.61□□□□□ -1.35
UBR1-210ENST00000569337 MED14OSP0DP75 135 aa6.61□□□□□ -1.35
UBR1-210ENST00000569337 S100A4P26447 101 aaKnown RBP6.61□□□□□ -1.35
UBR1-210ENST00000569337 CTRLP40313 264 aa6.61□□□□□ -1.35
UBR1-210ENST00000569337 FOXA3P55318 350 aaPredicted RBP6.61□□□□□ -1.35
UBR1-210ENST00000569337 SSTP61278 116 aa6.61□□□□□ -1.35
UBR1-210ENST00000569337 SVBPQ8N300 66 aa6.61□□□□□ -1.35
UBR1-210ENST00000569337 FER1L6-AS1Q8NA97 138 aa6.61□□□□□ -1.35
UBR1-210ENST00000569337 NUP35Q8NFH5 326 aa6.61□□□□□ -1.35
UBR1-210ENST00000569337 ANAPC16Q96DE5 110 aa6.61□□□□□ -1.35
UBR1-210ENST00000569337 PGLYRP4Q96LB8 373 aa6.61□□□□□ -1.35
UBR1-210ENST00000569337 SPXQ9BT56 116 aa6.61□□□□□ -1.35
UBR1-210ENST00000569337 TPPP3Q9BW30 176 aa6.61□□□□□ -1.35
UBR1-210ENST00000569337 JPT2Q9H910 190 aa6.61□□□□□ -1.35
UBR1-210ENST00000569337 MSRB1Q9NZV6 116 aa6.61□□□□□ -1.35
UBR1-210ENST00000569337 TRGV1A0A0A0MS02 117 aa6.6□□□□□ -1.35
UBR1-210ENST00000569337 GAGE12BA1L429 117 aa6.6□□□□□ -1.35
UBR1-210ENST00000569337 XKRY2A2RUG3 117 aa6.6□□□□□ -1.35
UBR1-210ENST00000569337 HIGD1CA8MV81 97 aa6.6□□□□□ -1.35
UBR1-210ENST00000569337 F5H768 121 aa6.6□□□□□ -1.35
UBR1-210ENST00000569337 M0R2P5 195 aa6.6□□□□□ -1.35
UBR1-210ENST00000569337 ATP6V1G1O75348 118 aa6.6□□□□□ -1.35
UBR1-210ENST00000569337 GAGE7O76087 117 aa6.6□□□□□ -1.35
UBR1-210ENST00000569337 NXPH4O95158 308 aa6.6□□□□□ -1.35
UBR1-210ENST00000569337 SNAPINO95295 136 aa6.6□□□□□ -1.35
UBR1-210ENST00000569337 ATP5G1P05496 136 aa6.6□□□□□ -1.35
UBR1-210ENST00000569337 GAGE12FP0CL80 117 aa6.6□□□□□ -1.35
UBR1-210ENST00000569337 GAGE12GP0CL81 117 aa6.6□□□□□ -1.35
UBR1-210ENST00000569337 GAGE12IP0CL82 117 aa6.6□□□□□ -1.35
UBR1-210ENST00000569337 FAM3BP58499 235 aaPredicted RBP6.6□□□□□ -1.35
UBR1-210ENST00000569337 LGALS9BQ3B8N2 356 aa6.6□□□□□ -1.35
UBR1-210ENST00000569337 TMEM88Q6PEY1 159 aa6.6□□□□□ -1.35
UBR1-210ENST00000569337 POM121L12Q8N7R1 296 aa6.6□□□□□ -1.35
UBR1-210ENST00000569337 RASL10AQ92737 203 aa6.6□□□□□ -1.35
UBR1-210ENST00000569337 GFRA4Q9GZZ7 299 aa6.6□□□□□ -1.35
UBR1-210ENST00000569337 RPS10P5Q9NQ39 176 aa6.6□□□□□ -1.35
UBR1-210ENST00000569337 PHLDA3Q9Y5J5 127 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms