RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 RASL10AQ92737 203 aa6.45□□□□□ -1.38
CAPN3-219ENST00000569136 TVP23CQ96ET8 276 aa6.45□□□□□ -1.38
CAPN3-219ENST00000569136 ZFP30Q9Y2G7 519 aa6.45□□□□□ -1.38
CAPN3-219ENST00000569136 TRAV1-1A0A0B4J248 108 aa6.44□□□□□ -1.38
CAPN3-219ENST00000569136 IGLV2-11P01706 119 aa6.44□□□□□ -1.38
CAPN3-219ENST00000569136 PFN1P07737 140 aaKnown RBP6.44□□□□□ -1.38
CAPN3-219ENST00000569136 UBE2G2P60604 165 aa6.44□□□□□ -1.38
CAPN3-219ENST00000569136 CST9LP1Q5W188 147 aa6.44□□□□□ -1.38
CAPN3-219ENST00000569136 SUMO4Q6EEV6 95 aa6.44□□□□□ -1.38
CAPN3-219ENST00000569136 Q6ZTI0 123 aa6.44□□□□□ -1.38
CAPN3-219ENST00000569136 PRNTQ86SH4 94 aa6.44□□□□□ -1.38
CAPN3-219ENST00000569136 AKAP14Q86UN6 197 aa6.44□□□□□ -1.38
CAPN3-219ENST00000569136 SLC51BQ86UW2 128 aa6.44□□□□□ -1.38
CAPN3-219ENST00000569136 FAM213BQ8TBF2 198 aa6.44□□□□□ -1.38
CAPN3-219ENST00000569136 SDF2L1Q9HCN8 221 aa6.44□□□□□ -1.38
CAPN3-219ENST00000569136 FABP5P3A8MUU1 101 aa6.43□□□□□ -1.38
CAPN3-219ENST00000569136 M0R2P5 195 aa6.43□□□□□ -1.38
CAPN3-219ENST00000569136 PEX7O00628 323 aa6.43□□□□□ -1.38
CAPN3-219ENST00000569136 GCGP01275 180 aa6.43□□□□□ -1.38
CAPN3-219ENST00000569136 CCL18P55774 89 aa6.43□□□□□ -1.38
CAPN3-219ENST00000569136 TMEM183BQ1AE95 376 aa6.43□□□□□ -1.38
CAPN3-219ENST00000569136 MUC21Q5SSG8 566 aa6.43□□□□□ -1.38
CAPN3-219ENST00000569136 Q6ZQT7 251 aa6.43□□□□□ -1.38
CAPN3-219ENST00000569136 COX8CQ7Z4L0 72 aa6.43□□□□□ -1.38
CAPN3-219ENST00000569136 UBE2DNLQ8IWF7 75 aa6.43□□□□□ -1.38
CAPN3-219ENST00000569136 TMEM183AQ8IXX5 376 aa6.43□□□□□ -1.38
CAPN3-219ENST00000569136 DAZAP1Q96EP5 407 aaKnown RBP6.43□□□□□ -1.38
CAPN3-219ENST00000569136 FMC1Q96HJ9 113 aa6.43□□□□□ -1.38
CAPN3-219ENST00000569136 SGK494Q96LW2 274 aa6.43□□□□□ -1.38
CAPN3-219ENST00000569136 MDFICQ9P1T7 246 aa6.43□□□□□ -1.38
CAPN3-219ENST00000569136 TRAV26-1A0A087WT03 109 aa6.42□□□□□ -1.38
CAPN3-219ENST00000569136 TRAV34A0A0B4J273 112 aa6.42□□□□□ -1.38
CAPN3-219ENST00000569136 IGHV3-16A0A0C4DH30 117 aa6.42□□□□□ -1.38
CAPN3-219ENST00000569136 TRBV6-1A0A0K0K1D8 114 aa6.42□□□□□ -1.38
CAPN3-219ENST00000569136 GNRH2O43555 120 aa6.42□□□□□ -1.38
CAPN3-219ENST00000569136 CIDEAO60543 219 aa6.42□□□□□ -1.38
CAPN3-219ENST00000569136 PAGE4O60829 102 aa6.42□□□□□ -1.38
CAPN3-219ENST00000569136 SVIPQ8NHG7 77 aa6.42□□□□□ -1.38
CAPN3-219ENST00000569136 PTH2Q96A98 100 aa6.42□□□□□ -1.38
CAPN3-219ENST00000569136 LINC00479Q96M42 142 aa6.42□□□□□ -1.38
CAPN3-219ENST00000569136 TXNDC17Q9BRA2 123 aa6.42□□□□□ -1.38
CAPN3-219ENST00000569136 NAGKQ9UJ70 344 aa6.42□□□□□ -1.38
CAPN3-219ENST00000569136 ALMS1Q8TCU4 4167 aa6.42□□□□□ -1.38
CAPN3-219ENST00000569136 SULT1A2P50226 295 aa6.41□□□□□ -1.38
CAPN3-219ENST00000569136 UBE2G1P62253 170 aa6.41□□□□□ -1.38
CAPN3-219ENST00000569136 PRO0255Q9UI72 69 aa6.41□□□□□ -1.38
CAPN3-219ENST00000569136 HHLA3Q9XRX5 114 aa6.41□□□□□ -1.38
CAPN3-219ENST00000569136 KMT2AQ03164 3969 aa6.41□□□□□ -1.38
CAPN3-219ENST00000569136 TAGLN2P37802 199 aaKnown RBP6.4□□□□□ -1.38
CAPN3-219ENST00000569136 ZNF80P51504 273 aaPredicted RBP6.4□□□□□ -1.38
CAPN3-219ENST00000569136 PIK3CD-AS1Q5SR53 167 aa6.4□□□□□ -1.38
CAPN3-219ENST00000569136 FAM162BQ5T6X4 162 aa6.4□□□□□ -1.38
CAPN3-219ENST00000569136 OR4C5Q8NGB2 326 aa6.4□□□□□ -1.38
CAPN3-219ENST00000569136 MANBALQ9NQG1 85 aa6.4□□□□□ -1.38
CAPN3-219ENST00000569136 COX11Q9Y6N1 276 aa6.4□□□□□ -1.38
CAPN3-219ENST00000569136 TRAV4A0A0B4J268 109 aa6.39□□□□□ -1.39
CAPN3-219ENST00000569136 TRGV4A0A0C4DH28 118 aa6.39□□□□□ -1.39
CAPN3-219ENST00000569136 A0A0J9YY99 117 aa6.39□□□□□ -1.39
CAPN3-219ENST00000569136 LTAP01374 205 aa6.39□□□□□ -1.39
CAPN3-219ENST00000569136 ORM1P02763 201 aa6.39□□□□□ -1.39
CAPN3-219ENST00000569136 TYMSP04818 313 aa6.39□□□□□ -1.39
CAPN3-219ENST00000569136 S100A4P26447 101 aaKnown RBP6.39□□□□□ -1.39
CAPN3-219ENST00000569136 AKR1C3P42330 323 aa6.39□□□□□ -1.39
CAPN3-219ENST00000569136 MRPL23Q16540 153 aaKnown RBP6.39□□□□□ -1.39
CAPN3-219ENST00000569136 SH2D6Q7Z4S9 175 aa6.39□□□□□ -1.39
CAPN3-219ENST00000569136 KRTAP4-5Q9BYR2 181 aa6.39□□□□□ -1.39
CAPN3-219ENST00000569136 MRPL16Q9NX20 251 aaKnown RBP6.39□□□□□ -1.39
CAPN3-219ENST00000569136 IFNA1P01562 189 aa6.38□□□□□ -1.39
CAPN3-219ENST00000569136 CRYBA4P53673 196 aa6.38□□□□□ -1.39
CAPN3-219ENST00000569136 ZNF674Q2M3X9 581 aa6.38□□□□□ -1.39
CAPN3-219ENST00000569136 ZNF876PQ49A33 203 aa6.38□□□□□ -1.39
CAPN3-219ENST00000569136 DNLZQ5SXM8 178 aa6.38□□□□□ -1.39
CAPN3-219ENST00000569136 Q86TA4 180 aa6.38□□□□□ -1.39
CAPN3-219ENST00000569136 BAGE2Q86Y30 109 aa6.38□□□□□ -1.39
CAPN3-219ENST00000569136 VSIG2Q96IQ7 327 aa6.38□□□□□ -1.39
CAPN3-219ENST00000569136 MUC4Q99102 2169 aa6.38□□□□□ -1.39
CAPN3-219ENST00000569136 VPS13DQ5THJ4 4388 aa6.38□□□□□ -1.39
CAPN3-219ENST00000569136 IGKV3D-20A0A0C4DH25 116 aa6.37□□□□□ -1.39
CAPN3-219ENST00000569136 A0A1B0GV50 99 aa6.37□□□□□ -1.39
CAPN3-219ENST00000569136 B4DEV8 164 aa6.37□□□□□ -1.39
CAPN3-219ENST00000569136 PDE6DO43924 150 aa6.37□□□□□ -1.39
CAPN3-219ENST00000569136 IGHV3-53P01767 116 aa6.37□□□□□ -1.39
CAPN3-219ENST00000569136 ASIPP42127 132 aa6.37□□□□□ -1.39
CAPN3-219ENST00000569136 CRIP1P50238 77 aa6.37□□□□□ -1.39
CAPN3-219ENST00000569136 CCL20P78556 96 aa6.37□□□□□ -1.39
CAPN3-219ENST00000569136 SOHLH1Q5JUK2 328 aa6.37□□□□□ -1.39
CAPN3-219ENST00000569136 LINC00336Q6ZUF6 198 aa6.37□□□□□ -1.39
CAPN3-219ENST00000569136 C9orf62Q8N4C0 152 aa6.37□□□□□ -1.39
CAPN3-219ENST00000569136 C9orf85Q96MD7 179 aa6.37□□□□□ -1.39
CAPN3-219ENST00000569136 Q9H8V8 135 aa6.37□□□□□ -1.39
CAPN3-219ENST00000569136 GNG13Q9P2W3 67 aa6.37□□□□□ -1.39
CAPN3-219ENST00000569136 LINC00588Q9Y4M8 146 aa6.37□□□□□ -1.39
CAPN3-219ENST00000569136 ICOSQ9Y6W8 199 aa6.37□□□□□ -1.39
CAPN3-219ENST00000569136 KRBOX1C9JBD0 128 aa6.36□□□□□ -1.39
CAPN3-219ENST00000569136 C9JCJ5 164 aa6.36□□□□□ -1.39
CAPN3-219ENST00000569136 RS1O15537 224 aa6.36□□□□□ -1.39
CAPN3-219ENST00000569136 ESRGQ1W209 222 aa6.36□□□□□ -1.39
CAPN3-219ENST00000569136 Q6ZR54 194 aa6.36□□□□□ -1.39
CAPN3-219ENST00000569136 NEGR1Q7Z3B1 354 aa6.36□□□□□ -1.39
CAPN3-219ENST00000569136 PCNPQ8WW12 178 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms